RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeastyeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB17YDL146W URA5P13298 226 aaKnown RBP3.67□□□□□ -1.82
LDB17YDL146W SKI3P17883 1432 aaKnown RBP3.67□□□□□ -1.82
LDB17YDL146W CCA1P21269 546 aa3.67□□□□□ -1.82
LDB17YDL146W MRPL24P36525 258 aaPredicted RBP3.67□□□□□ -1.82
LDB17YDL146W COS8P38723 381 aa3.67□□□□□ -1.82
LDB17YDL146W HHO1P53551 258 aa3.67□□□□□ -1.82
LDB17YDL146W CNL1Q06333 122 aa3.67□□□□□ -1.82
LDB17YDL146W PRP11Q07350 266 aaPredicted RBP3.67□□□□□ -1.82
LDB17YDL146W MCP1Q12106 302 aa3.67□□□□□ -1.82
LDB17YDL146W NUP157P40064 1391 aaKnown RBP3.67□□□□□ -1.82
LDB17YDL146W YOR304C-AO14468 76 aa3.67□□□□□ -1.82
LDB17YDL146W UTP11P34247 250 aaPredicted RBP3.67□□□□□ -1.82
LDB17YDL146W RPS20P38701 121 aaKnown RBP3.67□□□□□ -1.82
LDB17YDL146W NSG1P38837 291 aa3.67□□□□□ -1.82
LDB17YDL146W VMA7P39111 118 aa3.67□□□□□ -1.82
LDB17YDL146W SER2P42941 309 aa3.67□□□□□ -1.82
LDB17YDL146W RSM27P53305 110 aa3.67□□□□□ -1.82
LDB17YDL146W CAB4P53332 305 aa3.67□□□□□ -1.82
LDB17YDL146W YIL177CP40434 1758 aa3.66□□□□□ -1.82
LDB17YDL146W YJL225CP40889 1758 aa3.66□□□□□ -1.82
LDB17YDL146W CBP6P07253 162 aaPredicted RBP3.66□□□□□ -1.82
LDB17YDL146W RPS1BP23248 255 aaKnown RBP3.66□□□□□ -1.82
LDB17YDL146W PRE7P23724 241 aaKnown RBP3.66□□□□□ -1.82
LDB17YDL146W TFC1P32367 649 aa3.66□□□□□ -1.82
LDB17YDL146W SHE2P36068 246 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
LDB17YDL146W ERJ5P43613 295 aaPredicted RBP3.66□□□□□ -1.82
LDB17YDL146W YGR039WP53225 103 aa3.66□□□□□ -1.82
LDB17YDL146W ALG9P53868 555 aaKnown RBP3.66□□□□□ -1.82
LDB17YDL146W DIG2Q03373 323 aaKnown RBP3.66□□□□□ -1.82
LDB17YDL146W ATG39Q06159 398 aa3.66□□□□□ -1.82
LDB17YDL146W YOL014WQ08110 124 aa3.66□□□□□ -1.82
LDB17YDL146W AKR2Q12013 749 aa3.66□□□□□ -1.82
LDB17YDL146W YML100W-AQ8TGT0 57 aa3.66□□□□□ -1.82
LDB17YDL146W REP2P03872 296 aa3.65□□□□□ -1.83
LDB17YDL146W UGX2P32772 223 aa3.65□□□□□ -1.83
LDB17YDL146W OPY1P38271 328 aa3.65□□□□□ -1.83
LDB17YDL146W ECM34P38728 170 aa3.65□□□□□ -1.83
LDB17YDL146W YPI1P43587 155 aa3.65□□□□□ -1.83
LDB17YDL146W GEP5Q12393 293 aa3.65□□□□□ -1.83
LDB17YDL146W PSF1Q12488 208 aa3.65□□□□□ -1.83
LDB17YDL146W YIR021W-AQ3E739 70 aa3.65□□□□□ -1.83
LDB17YDL146W YLR412C-AQ3E742 68 aa3.65□□□□□ -1.83
LDB17YDL146W SNT2P53127 1403 aa3.64□□□□□ -1.83
LDB17YDL146W SGA1P08019 549 aa3.64□□□□□ -1.83
LDB17YDL146W COX10P21592 462 aa3.64□□□□□ -1.83
LDB17YDL146W TOM40P23644 387 aaKnown RBP3.64□□□□□ -1.83
LDB17YDL146W RSA4P25382 515 aaKnown RBP3.64□□□□□ -1.83
LDB17YDL146W MRP49P32388 137 aa3.64□□□□□ -1.83
LDB17YDL146W PAN3P36102 679 aaPredicted RBP3.64□□□□□ -1.83
LDB17YDL146W FIP1P45976 327 aa3.64□□□□□ -1.83
LDB17YDL146W SLM2P53955 656 aa3.64□□□□□ -1.83
LDB17YDL146W RUB1Q03919 77 aa3.64□□□□□ -1.83
LDB17YDL146W FLO11P08640 1367 aa3.64□□□□□ -1.83
LDB17YDL146W COX4P04037 155 aa3.63□□□□□ -1.83
LDB17YDL146W ATP5P09457 212 aa3.63□□□□□ -1.83
LDB17YDL146W ATP15P21306 62 aa3.63□□□□□ -1.83
LDB17YDL146W VMA11P32842 164 aa3.63□□□□□ -1.83
LDB17YDL146W YGR219WP53307 113 aa3.63□□□□□ -1.83
LDB17YDL146W CGI121Q03705 181 aaKnown RBP3.63□□□□□ -1.83
LDB17YDL146W RPL9AP05738 191 aaKnown RBP3.62□□□□□ -1.83
LDB17YDL146W TIR1P10863 254 aa3.62□□□□□ -1.83
LDB17YDL146W PHO85P17157 305 aa3.62□□□□□ -1.83
LDB17YDL146W GSP1P32835 219 aaKnown RBP3.62□□□□□ -1.83
LDB17YDL146W GSP2P32836 220 aaKnown RBP3.62□□□□□ -1.83
LDB17YDL146W MRPL27P36526 146 aaPredicted RBP3.62□□□□□ -1.83
LDB17YDL146W SWD3P38123 315 aa3.62□□□□□ -1.83
LDB17YDL146W FCY21P40039 528 aa3.62□□□□□ -1.83
LDB17YDL146W PRE5P40302 234 aaKnown RBP3.62□□□□□ -1.83
LDB17YDL146W PGD1P40356 397 aa3.62□□□□□ -1.83
LDB17YDL146W YFL019CP43576 117 aa3.62□□□□□ -1.83
LDB17YDL146W RPL9BP51401 191 aaKnown RBP3.62□□□□□ -1.83
LDB17YDL146W APJ1P53940 528 aa3.62□□□□□ -1.83
LDB17YDL146W APS2Q00381 147 aa3.62□□□□□ -1.83
LDB17YDL146W YOR289WQ12012 251 aaPredicted RBP3.62□□□□□ -1.83
LDB17YDL146W FCY1Q12178 158 aa3.62□□□□□ -1.83
LDB17YDL146W YOL085CQ99345 113 aa3.62□□□□□ -1.83
LDB17YDL146W RGI1P40043 161 aaPredicted RBP3.61□□□□□ -1.83
LDB17YDL146W YER181CP40097 107 aa3.61□□□□□ -1.83
LDB17YDL146W AYR1P40471 297 aa3.61□□□□□ -1.83
LDB17YDL146W GLR1P41921 483 aaKnown RBP3.61□□□□□ -1.83
LDB17YDL146W VPS71Q03433 280 aa3.61□□□□□ -1.83
LDB17YDL146W LDB18Q07887 179 aa3.61□□□□□ -1.83
LDB17YDL146W YHR125WP38831 101 aa3.6□□□□□ -1.83
LDB17YDL146W YER134CP40081 178 aa3.6□□□□□ -1.83
LDB17YDL146W GPI2P46961 280 aa3.6□□□□□ -1.83
LDB17YDL146W RSM10Q03201 203 aa3.6□□□□□ -1.83
LDB17YDL146W NAT3Q06504 195 aa3.6□□□□□ -1.83
LDB17YDL146W TOP2P06786 1428 aaKnown RBP3.6□□□□□ -1.83
LDB17YDL146W SRP21P32342 167 aa3.6□□□□□ -1.83
LDB17YDL146W YNL200CP40165 246 aaKnown RBP3.6□□□□□ -1.83
LDB17YDL146W ARC15P40518 154 aaRIP-Chip data3.6□□□□□ -1.83not detected
LDB17YDL146W SPG3Q04398 127 aaPredicted RBP3.6□□□□□ -1.83
LDB17YDL146W YPL225WQ08971 146 aaKnown RBP3.6□□□□□ -1.83
LDB17YDL146W YOR214CQ12282 236 aa3.6□□□□□ -1.83
LDB17YDL146W FMP49A0A023PZB3 126 aa3.59□□□□□ -1.84
LDB17YDL146W TIM9O74700 87 aa3.59□□□□□ -1.84
LDB17YDL146W PTC1P35182 281 aa3.59□□□□□ -1.84
LDB17YDL146W VTC1P40046 129 aaRIP-Chip data3.59□□□□□ -1.84 RIP-Chip
LDB17YDL146W DSK2P48510 373 aa3.59□□□□□ -1.84
LDB17YDL146W YGL193CP53097 103 aa3.59□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 86.5 ms