RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	YDL115C	YER175W-A	Q8TGU4	54 aa		4.25	□□□□□ -1.73
IWR1	YDL115C	RPI1	P23250	407 aa	Known RBP	4.24	□□□□□ -1.73
IWR1	YDL115C	ERV1	P27882	189 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	ERG2	P32352	222 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	YOX1	P34161	385 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	SLM6	P38343	150 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	YHL044W	P38727	235 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	IKI1	P38874	309 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	YEA4	P40004	342 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	YFL051C	P43552	160 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	GON7	P46984	123 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	YHC3	P47040	408 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	SNN1	P48232	102 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	MSO1	P53604	210 aa	Known RBP	4.24	□□□□□ -1.73
IWR1	YDL115C	YNR066C	P53752	436 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	YIF1	P53845	314 aa	Known RBP	4.24	□□□□□ -1.73
IWR1	YDL115C	YNL046W	P53956	172 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	YCL001W-A	P87012	153 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	SKO1	Q02100	647 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	YMR279C	Q03263	540 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	CAC2	Q04199	468 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	PML1	Q07930	204 aa	Predicted RBP	4.24	□□□□□ -1.73
IWR1	YDL115C	IRC25	Q07951	179 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	SPO24	Q3E752	67 aa		4.24	□□□□□ -1.73
IWR1	YDL115C	LDS1	P31379	325 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	AGA2	P32781	87 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	EMP24	P32803	203 aa	Known RBP	4.23	□□□□□ -1.73
IWR1	YDL115C	CPR5	P35176	225 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	SOR1	P35497	357 aa	Known RBP	4.23	□□□□□ -1.73
IWR1	YDL115C	YGP1	P38616	354 aa	Known RBP	4.23	□□□□□ -1.73
IWR1	YDL115C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
IWR1	YDL115C	PDR17	P53844	350 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	APJ1	P53940	528 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	RPL21A	Q02753	160 aa	Known RBP	4.23	□□□□□ -1.73
IWR1	YDL115C	YML108W	Q03759	105 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	YLR179C	Q06252	201 aa	Known RBP	4.23	□□□□□ -1.73
IWR1	YDL115C	YPD1	Q07688	167 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	SOR2	Q07786	357 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	RDL1	Q12305	139 aa	Known RBP	4.23	□□□□□ -1.73
IWR1	YDL115C	RPL21B	Q12672	160 aa	Known RBP	4.23	□□□□□ -1.73
IWR1	YDL115C	YOR192C-C	Q3E736	78 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	YBR255C-A	Q3E776	120 aa		4.23	□□□□□ -1.73
IWR1	YDL115C	GCN1	P33892	2672 aa	Known RBP	4.22	□□□□□ -1.73
IWR1	YDL115C	RPL39	P04650	51 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	ATP10	P18496	279 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	YMR31	P19955	123 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	MSK1	P32048	576 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	YKL162C	P36052	402 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	RIB5	P38145	238 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	ECM14	P38836	430 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	NOP16	P40007	231 aa	Known RBP	4.22	□□□□□ -1.73
IWR1	YDL115C	BNA1	P47096	177 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	MCM22	P47167	239 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	RPL9B	P51401	191 aa	Known RBP	4.22	□□□□□ -1.73
IWR1	YDL115C	GEP7	P53171	287 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	SMM1	P53720	384 aa	Known RBP	4.22	□□□□□ -1.73
IWR1	YDL115C	YNR064C	P53750	290 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	WSC2	P53832	503 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	CWC25	P53854	179 aa	Known RBP	4.22	□□□□□ -1.73
IWR1	YDL115C	TIM10	P87108	93 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	SED1	Q01589	338 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	ATP14	Q12349	124 aa		4.22	□□□□□ -1.73
IWR1	YDL115C	VPS63	O13549	108 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	RPL9A	P05738	191 aa	Known RBP	4.21	□□□□□ -1.74
IWR1	YDL115C	ROX3	P25046	220 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	DAL80	P26343	269 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	PET100	P38958	111 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	SPC25	P40014	221 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	PIR5	P46999	287 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	YJR056C	P47115	236 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	SBH2	P52871	88 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	CAF40	P53829	373 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	INN1	P53901	409 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	ERV25	P54837	211 aa	Known RBP	4.21	□□□□□ -1.74
IWR1	YDL115C	YDR114C	Q04597	100 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	FSH2	Q05015	223 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	YTH1	Q06102	208 aa	Predicted RBP	4.21	□□□□□ -1.74
IWR1	YDL115C	GAT3	Q07928	141 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	ZEO1	Q08245	113 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	YDL009C	Q12210	107 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	YOS1	Q3E834	85 aa		4.21	□□□□□ -1.74
IWR1	YDL115C	SIP1	P32578	815 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	UPS2	P35200	230 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	YIP1	P53039	248 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	SSU72	P53538	206 aa	Predicted RBP	4.2	□□□□□ -1.74
IWR1	YDL115C	FMP41	P53889	259 aa	Known RBP	4.2	□□□□□ -1.74
IWR1	YDL115C	EST3	Q03096	181 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	TMA23	Q03525	211 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	YMR082C	Q04276	118 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	API2	Q04413	109 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	DCS1	Q06151	350 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	ARR2	Q06597	130 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	YDL242W	Q07746	117 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	SDO1	Q07953	250 aa	Known RBP	4.2	□□□□□ -1.74
IWR1	YDL115C	YOL118C	Q08259	102 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	YPL264C	Q08980	353 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	ATG5	Q12380	294 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	BOL1	Q3E793	110 aa		4.2	□□□□□ -1.74
IWR1	YDL115C	YDR157W	A0A023PZE8	133 aa		4.19	□□□□□ -1.74
IWR1	YDL115C	YLR302C	O13544	120 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms