RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YAR023CD6VPM8 179 aa1.61□□□□□ -2.15
UBC9YDL064W TAH1P25638 111 aaPredicted RBP1.61□□□□□ -2.15
UBC9YDL064W AIM2P39721 246 aa1.61□□□□□ -2.15
UBC9YDL064W YPL073CP40323 161 aa1.61□□□□□ -2.15
UBC9YDL064W MZM1Q03429 123 aaPredicted RBP1.61□□□□□ -2.15
UBC9YDL064W NAT3Q06504 195 aa1.61□□□□□ -2.15
UBC9YDL064W YOL024WQ08172 172 aa1.61□□□□□ -2.15
UBC9YDL064W YER076CP40049 302 aa1.6□□□□□ -2.15
UBC9YDL064W PDS1P40316 373 aaPredicted RBP1.6□□□□□ -2.15
UBC9YDL064W MPA43P53583 542 aaPredicted RBP1.6□□□□□ -2.15
UBC9YDL064W NOC4Q06512 552 aaPredicted RBP1.6□□□□□ -2.15
UBC9YDL064W TVP38P36164 337 aa1.59□□□□□ -2.15
UBC9YDL064W FMP23P38231 175 aa1.59□□□□□ -2.15
UBC9YDL064W YER134CP40081 178 aa1.59□□□□□ -2.15
UBC9YDL064W RNH202Q05635 350 aa1.59□□□□□ -2.15
UBC9YDL064W GRX8Q05926 109 aa1.59□□□□□ -2.15
UBC9YDL064W IRC23Q08416 157 aa1.59□□□□□ -2.15
UBC9YDL064W GRE1Q08969 168 aa1.59□□□□□ -2.15
UBC9YDL064W TRX3P25372 127 aa1.58□□□□□ -2.16
UBC9YDL064W SNO1Q03144 224 aa1.58□□□□□ -2.16
UBC9YDL064W DYN3Q04949 312 aa1.58□□□□□ -2.16
UBC9YDL064W YNL146C-AQ3E7Z1 64 aa1.58□□□□□ -2.16
UBC9YDL064W SNF4P12904 322 aa1.57□□□□□ -2.16
UBC9YDL064W TDA4P47153 279 aa1.57□□□□□ -2.16
UBC9YDL064W RTC4P53850 401 aa1.57□□□□□ -2.16
UBC9YDL064W UBC7Q02159 165 aa1.57□□□□□ -2.16
UBC9YDL064W YPR174CQ06616 221 aaPredicted RBP1.57□□□□□ -2.16
UBC9YDL064W YLR031WQ07978 186 aa1.57□□□□□ -2.16
UBC9YDL064W FYV12Q08559 129 aa1.57□□□□□ -2.16
UBC9YDL064W TIR1P10863 254 aa1.56□□□□□ -2.16
UBC9YDL064W MGT1P26188 188 aa1.56□□□□□ -2.16
UBC9YDL064W PAM17P36147 197 aa1.56□□□□□ -2.16
UBC9YDL064W YHL018WP38744 120 aaPredicted RBP1.56□□□□□ -2.16
UBC9YDL064W MTW1P39731 289 aa1.56□□□□□ -2.16
UBC9YDL064W YFL019CP43576 117 aa1.56□□□□□ -2.16
UBC9YDL064W GIM3P53900 129 aa1.56□□□□□ -2.16
UBC9YDL064W NRK1P53915 240 aa1.56□□□□□ -2.16
UBC9YDL064W YHR007C-AQ07074 71 aa1.56□□□□□ -2.16
UBC9YDL064W BRX1Q08235 291 aaKnown RBP1.56□□□□□ -2.16
UBC9YDL064W MDM35O60200 86 aa1.55□□□□□ -2.16
UBC9YDL064W YKR041WP36134 250 aa1.55□□□□□ -2.16
UBC9YDL064W GPI14P47088 403 aaKnown RBP1.55□□□□□ -2.16
UBC9YDL064W YMR295CQ03559 197 aa1.55□□□□□ -2.16
UBC9YDL064W FIT2Q08906 153 aa1.55□□□□□ -2.16
UBC9YDL064W AQY2P0CD90 149 aa1.54□□□□□ -2.16
UBC9YDL064W NSP1P14907 823 aaKnown RBP1.54□□□□□ -2.16
UBC9YDL064W CAF4P36130 643 aa1.54□□□□□ -2.16
UBC9YDL064W RIO2P40160 425 aaKnown RBP1.54□□□□□ -2.16
UBC9YDL064W FLX1P40464 311 aa1.54□□□□□ -2.16
UBC9YDL064W YNL247WP53852 767 aaKnown RBP1.54□□□□□ -2.16
UBC9YDL064W DIG2Q03373 323 aaKnown RBP1.54□□□□□ -2.16
UBC9YDL064W VPS71Q03433 280 aa1.54□□□□□ -2.16
UBC9YDL064W AIM34Q03673 198 aa1.54□□□□□ -2.16
UBC9YDL064W SHH3Q04487 196 aa1.54□□□□□ -2.16
UBC9YDL064W YMR253CQ04835 414 aa1.54□□□□□ -2.16
UBC9YDL064W YMR315WQ04869 349 aaKnown RBP1.54□□□□□ -2.16
UBC9YDL064W YLR036CQ07986 203 aa1.54□□□□□ -2.16
UBC9YDL064W YPR013CQ12145 317 aa1.54□□□□□ -2.16
UBC9YDL064W COX8P04039 78 aa1.53□□□□□ -2.16
UBC9YDL064W PHO85P17157 305 aa1.53□□□□□ -2.16
UBC9YDL064W SPC25P40014 221 aa1.53□□□□□ -2.16
UBC9YDL064W HOP2P53187 214 aa1.53□□□□□ -2.16
UBC9YDL064W PGA1P53896 198 aa1.53□□□□□ -2.16
UBC9YDL064W YNL033WP53964 284 aa1.53□□□□□ -2.16
UBC9YDL064W PRP11Q07350 266 aaPredicted RBP1.53□□□□□ -2.16
UBC9YDL064W AHC2P25649 128 aa1.52□□□□□ -2.17
UBC9YDL064W SHG1P38337 142 aa1.52□□□□□ -2.17
UBC9YDL064W HYR1P40581 163 aaKnown RBP1.52□□□□□ -2.17
UBC9YDL064W YAE1P47118 141 aaPredicted RBP1.52□□□□□ -2.17
UBC9YDL064W DAD4P69851 72 aa1.52□□□□□ -2.17
UBC9YDL064W YDL085C-AQ3E7B7 68 aaKnown RBP1.52□□□□□ -2.17
UBC9YDL064W RPS24AP0CX31 135 aaKnown RBP1.51□□□□□ -2.17
UBC9YDL064W RPS24BP0CX32 135 aaKnown RBP1.51□□□□□ -2.17
UBC9YDL064W GCY1P14065 312 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
UBC9YDL064W ATP7P30902 174 aa1.51□□□□□ -2.17
UBC9YDL064W CUP9P41817 306 aa1.51□□□□□ -2.17
UBC9YDL064W IDP1P21954 428 aaKnown RBP1.5□□□□□ -2.17
UBC9YDL064W YFL065CP43539 102 aa1.5□□□□□ -2.17
UBC9YDL064W THG1P53215 237 aaKnown RBP1.5□□□□□ -2.17
UBC9YDL064W RCE1Q03530 315 aa1.5□□□□□ -2.17
UBC9YDL064W YOR342CQ12182 319 aa1.5□□□□□ -2.17
UBC9YDL064W PST2Q12335 198 aaKnown RBP1.5□□□□□ -2.17
UBC9YDL064W FAS1P07149 2051 aaKnown RBP1.49□□□□□ -2.17
UBC9YDL064W CPR5P35176 225 aa1.49□□□□□ -2.17
UBC9YDL064W ECM4P36156 370 aa1.49□□□□□ -2.17
UBC9YDL064W YEL008WP40001 126 aa1.49□□□□□ -2.17
UBC9YDL064W YFH7P43591 353 aa1.49□□□□□ -2.17
UBC9YDL064W SBH1P52870 82 aa1.49□□□□□ -2.17
UBC9YDL064W CWC27Q02770 301 aa1.49□□□□□ -2.17
UBC9YDL064W YMR252CQ04814 134 aa1.49□□□□□ -2.17
UBC9YDL064W ATG38Q05789 226 aaKnown RBP1.49□□□□□ -2.17
UBC9YDL064W YKL102CP34249 101 aa1.48□□□□□ -2.17
UBC9YDL064W CLG1P35190 452 aa1.48□□□□□ -2.17
UBC9YDL064W YHL042WP38729 150 aa1.48□□□□□ -2.17
UBC9YDL064W NSG1P38837 291 aa1.48□□□□□ -2.17
UBC9YDL064W YEL067CP39978 195 aa1.48□□□□□ -2.17
UBC9YDL064W POG1P40473 351 aa1.48□□□□□ -2.17
UBC9YDL064W TMA22P47089 198 aaPredicted RBP1.48□□□□□ -2.17
UBC9YDL064W SOL1P50278 321 aa1.48□□□□□ -2.17
UBC9YDL064W SHH4Q06236 168 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms