RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C LSM3P57743 89 aaKnown RBP1.9□□□□□ -2.11
SHG1YBR258C DAD3P69850 94 aa1.9□□□□□ -2.11
SHG1YBR258C YLR179CQ06252 201 aaKnown RBP1.9□□□□□ -2.11
SHG1YBR258C BBP1Q12365 385 aa1.9□□□□□ -2.11
SHG1YBR258C YCL048W-AQ2V2Q2 79 aa1.9□□□□□ -2.11
SHG1YBR258C NSP1P14907 823 aaKnown RBP1.89□□□□□ -2.11
SHG1YBR258C MRPL25P23369 157 aa1.89□□□□□ -2.11
SHG1YBR258C ERG24P32462 438 aaKnown RBP1.89□□□□□ -2.11
SHG1YBR258C YHR125WP38831 101 aa1.89□□□□□ -2.11
SHG1YBR258C GLR1P41921 483 aaKnown RBP1.89□□□□□ -2.11
SHG1YBR258C RPA43P46669 326 aa1.89□□□□□ -2.11
SHG1YBR258C YJR056CP47115 236 aa1.89□□□□□ -2.11
SHG1YBR258C HAM1P47119 197 aaKnown RBP1.89□□□□□ -2.11
SHG1YBR258C MCM22P47167 239 aa1.89□□□□□ -2.11
SHG1YBR258C DAN1P47178 298 aa1.89□□□□□ -2.11
SHG1YBR258C DCR2Q05924 578 aa1.89□□□□□ -2.11
SHG1YBR258C YDL180WQ12301 547 aa1.89□□□□□ -2.11
SHG1YBR258C SEC14P24280 304 aaKnown RBP1.88□□□□□ -2.11
SHG1YBR258C MSA2P36157 363 aa1.88□□□□□ -2.11
SHG1YBR258C MAK5P38112 773 aaPredicted RBP1.88□□□□□ -2.11
SHG1YBR258C LIA1P47120 325 aaKnown RBP1.88□□□□□ -2.11
SHG1YBR258C YGR026WP53217 278 aa1.88□□□□□ -2.11
SHG1YBR258C SPT3P06844 337 aa1.87□□□□□ -2.11
SHG1YBR258C PUT1P09368 476 aa1.87□□□□□ -2.11
SHG1YBR258C RPL35AP0CX84 120 aaKnown RBP1.87□□□□□ -2.11
SHG1YBR258C RPL35BP0CX85 120 aaKnown RBP1.87□□□□□ -2.11
SHG1YBR258C GRX2P17695 143 aaKnown RBP1.87□□□□□ -2.11
SHG1YBR258C YCR016WP25617 290 aaKnown RBP1.87□□□□□ -2.11
SHG1YBR258C DOA4P32571 926 aa1.87□□□□□ -2.11
SHG1YBR258C NRG2P38082 220 aa1.87□□□□□ -2.11
SHG1YBR258C FES1P38260 290 aa1.87□□□□□ -2.11
SHG1YBR258C RPF1P38805 295 aaKnown RBP1.87□□□□□ -2.11
SHG1YBR258C FCY21P40039 528 aa1.87□□□□□ -2.11
SHG1YBR258C YER085CP40058 173 aa1.87□□□□□ -2.11
SHG1YBR258C RFC4P40339 323 aaKnown RBP1.87□□□□□ -2.11
SHG1YBR258C ADO1P47143 340 aaKnown RBP1.87□□□□□ -2.11
SHG1YBR258C DID2P69771 204 aa1.87□□□□□ -2.11
SHG1YBR258C YLR126CQ12288 251 aa1.87□□□□□ -2.11
SHG1YBR258C TRX3P25372 127 aa1.86□□□□□ -2.11
SHG1YBR258C NTF2P33331 125 aaKnown RBP1.86□□□□□ -2.11
SHG1YBR258C MSN4P33749 630 aa1.86□□□□□ -2.11
SHG1YBR258C VPS21P36017 210 aaKnown RBP1.86□□□□□ -2.11
SHG1YBR258C FIP1P45976 327 aa1.86□□□□□ -2.11
SHG1YBR258C YJL027CP47063 138 aaPredicted RBP1.86□□□□□ -2.11
SHG1YBR258C APS3P47064 194 aa1.86□□□□□ -2.11
SHG1YBR258C SIP18P50263 79 aa1.86□□□□□ -2.11
SHG1YBR258C TOS8P53147 276 aa1.86□□□□□ -2.11
SHG1YBR258C YDR249CQ03787 373 aa1.86□□□□□ -2.11
SHG1YBR258C PSF1Q12488 208 aa1.86□□□□□ -2.11
SHG1YBR258C HTL1Q9URQ5 78 aa1.86□□□□□ -2.11
SHG1YBR258C YHR139C-AO13536 103 aa1.85□□□□□ -2.11
SHG1YBR258C ADH3P07246 375 aaKnown RBP1.85□□□□□ -2.11
SHG1YBR258C YHR032W-AP0C5N6 59 aa1.85□□□□□ -2.11
SHG1YBR258C DSF1P0CX08 502 aa1.85□□□□□ -2.11
SHG1YBR258C YNR073CP0CX09 502 aa1.85□□□□□ -2.11
SHG1YBR258C MATALPHA1P0CY06 175 aa1.85□□□□□ -2.11
SHG1YBR258C HMLALPHA1P0CY07 175 aa1.85□□□□□ -2.11
SHG1YBR258C SRB4P32569 687 aa1.85□□□□□ -2.11
SHG1YBR258C VPS51P36116 164 aa1.85□□□□□ -2.11
SHG1YBR258C PEX17P40155 199 aa1.85□□□□□ -2.11
SHG1YBR258C ILM1P47155 203 aa1.85□□□□□ -2.11
SHG1YBR258C YPL257WQ08974 193 aa1.85□□□□□ -2.11
SHG1YBR258C RAS2P01120 322 aaKnown RBP1.84□□□□□ -2.11
SHG1YBR258C PET9P18239 318 aaKnown RBP1.84□□□□□ -2.11
SHG1YBR258C ECM33P38248 429 aaKnown RBP1.84□□□□□ -2.11
SHG1YBR258C CUE1P38428 203 aa1.84□□□□□ -2.11
SHG1YBR258C CAT5P41735 233 aa1.84□□□□□ -2.11
SHG1YBR258C PRM10P42946 383 aa1.84□□□□□ -2.11
SHG1YBR258C YFR054CP43622 192 aa1.84□□□□□ -2.11
SHG1YBR258C MIC26P50087 233 aa1.84□□□□□ -2.11
SHG1YBR258C NSA1P53136 463 aaPredicted RBP1.84□□□□□ -2.11
SHG1YBR258C RCE1Q03530 315 aa1.84□□□□□ -2.11
SHG1YBR258C PRP11Q07350 266 aaPredicted RBP1.84□□□□□ -2.11
SHG1YBR258C NIP7Q08962 181 aaKnown RBP1.84□□□□□ -2.11
SHG1YBR258C MHT1Q12525 324 aa1.84□□□□□ -2.11
SHG1YBR258C YOR020W-AQ3E824 90 aa1.84□□□□□ -2.11
SHG1YBR258C RHO1P06780 209 aaKnown RBP1.83□□□□□ -2.12
SHG1YBR258C MDH3P32419 343 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
SHG1YBR258C OTU1P43558 301 aa1.83□□□□□ -2.12
SHG1YBR258C ABF2Q02486 183 aa1.83□□□□□ -2.12
SHG1YBR258C ARR2Q06597 130 aa1.83□□□□□ -2.12
SHG1YBR258C APA2P22108 325 aa1.82□□□□□ -2.12
SHG1YBR258C CDC10P25342 322 aaKnown RBP1.82□□□□□ -2.12
SHG1YBR258C PEX4P29340 183 aa1.82□□□□□ -2.12
SHG1YBR258C RIB1P38066 345 aa1.82□□□□□ -2.12
SHG1YBR258C COX15P40086 486 aa1.82□□□□□ -2.12
SHG1YBR258C GCN20P43535 752 aaKnown RBP1.82□□□□□ -2.12
SHG1YBR258C YML108WQ03759 105 aa1.82□□□□□ -2.12
SHG1YBR258C YDR278CQ05612 105 aa1.82□□□□□ -2.12
SHG1YBR258C ATG39Q06159 398 aa1.82□□□□□ -2.12
SHG1YBR258C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SHG1YBR258C TIM9O74700 87 aa1.81□□□□□ -2.12
SHG1YBR258C RPL9AP05738 191 aaKnown RBP1.81□□□□□ -2.12
SHG1YBR258C RPL24BP24000 155 aaKnown RBP1.81□□□□□ -2.12
SHG1YBR258C VMA6P32366 345 aaKnown RBP1.81□□□□□ -2.12
SHG1YBR258C YAR068WP39564 161 aa1.81□□□□□ -2.12
SHG1YBR258C RPL9BP51401 191 aaKnown RBP1.81□□□□□ -2.12
SHG1YBR258C ERV29P53337 310 aa1.81□□□□□ -2.12
SHG1YBR258C MRPS8Q03799 155 aa1.81□□□□□ -2.12
SHG1YBR258C NEJ1Q06148 342 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms