RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeastyeast

Gene HHF1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HHF1YBR009C YMR230W-AQ3E7B5 62 aa2.49□□□□□ -2.01
HHF1YBR009C YML100W-AQ8TGT0 57 aa2.49□□□□□ -2.01
HHF1YBR009C ADH1P00330 348 aaKnown RBP2.48□□□□□ -2.01
HHF1YBR009C CCA1P21269 546 aa2.48□□□□□ -2.01
HHF1YBR009C OPY1P38271 328 aa2.48□□□□□ -2.01
HHF1YBR009C NSG1P38837 291 aa2.48□□□□□ -2.01
HHF1YBR009C XPT1P47165 209 aa2.48□□□□□ -2.01
HHF1YBR009C CCC1P47818 322 aa2.48□□□□□ -2.01
HHF1YBR009C ALG9P53868 555 aaKnown RBP2.48□□□□□ -2.01
HHF1YBR009C COF1Q03048 143 aaKnown RBP2.48□□□□□ -2.01
HHF1YBR009C AKR2Q12013 749 aa2.48□□□□□ -2.01
HHF1YBR009C RAD10P06838 210 aa2.47□□□□□ -2.01
HHF1YBR009C CBP6P07253 162 aaPredicted RBP2.47□□□□□ -2.01
HHF1YBR009C YHR125WP38831 101 aa2.47□□□□□ -2.01
HHF1YBR009C FCY21P40039 528 aa2.47□□□□□ -2.01
HHF1YBR009C PRE5P40302 234 aaKnown RBP2.47□□□□□ -2.01
HHF1YBR009C YFL019CP43576 117 aa2.47□□□□□ -2.01
HHF1YBR009C YFR054CP43622 192 aa2.47□□□□□ -2.01
HHF1YBR009C FIP1P45976 327 aa2.47□□□□□ -2.01
HHF1YBR009C OST2P46964 130 aa2.47□□□□□ -2.01
HHF1YBR009C SMD1Q02260 146 aaPredicted RBP2.47□□□□□ -2.01
HHF1YBR009C FCF1Q05498 189 aaPredicted RBP2.47□□□□□ -2.01
HHF1YBR009C NEJ1Q06148 342 aa2.47□□□□□ -2.01
HHF1YBR009C NAT3Q06504 195 aa2.47□□□□□ -2.01
HHF1YBR009C SLO1Q3E784 85 aa2.47□□□□□ -2.01
HHF1YBR009C AUS1Q08409 1394 aa2.47□□□□□ -2.01
HHF1YBR009C MDS3P53094 1487 aa2.46□□□□□ -2.02
HHF1YBR009C TIM9O74700 87 aa2.46□□□□□ -2.02
HHF1YBR009C RPL9AP05738 191 aaKnown RBP2.46□□□□□ -2.02
HHF1YBR009C RSA4P25382 515 aaKnown RBP2.46□□□□□ -2.02
HHF1YBR009C HSP30P25619 332 aa2.46□□□□□ -2.02
HHF1YBR009C VMA11P32842 164 aa2.46□□□□□ -2.02
HHF1YBR009C CPR5P35176 225 aa2.46□□□□□ -2.02
HHF1YBR009C GLR1P41921 483 aaKnown RBP2.46□□□□□ -2.02
HHF1YBR009C RPL9BP51401 191 aaKnown RBP2.46□□□□□ -2.02
HHF1YBR009C YGL260WP53056 76 aa2.46□□□□□ -2.02
HHF1YBR009C YGR219WP53307 113 aa2.46□□□□□ -2.02
HHF1YBR009C MCH1Q07376 486 aa2.46□□□□□ -2.02
HHF1YBR009C IES3Q12345 250 aa2.46□□□□□ -2.02
HHF1YBR009C YLR412C-AQ3E742 68 aa2.46□□□□□ -2.02
HHF1YBR009C ATP5P09457 212 aa2.45□□□□□ -2.02
HHF1YBR009C SHE2P36068 246 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
HHF1YBR009C RPS20P38701 121 aaKnown RBP2.45□□□□□ -2.02
HHF1YBR009C VTC1P40046 129 aaRIP-Chip data2.45□□□□□ -2.02not detected
HHF1YBR009C ARC15P40518 154 aaRIP-Chip data2.45□□□□□ -2.02not detected
HHF1YBR009C YPI1P43587 155 aa2.45□□□□□ -2.02
HHF1YBR009C ERJ5P43613 295 aaPredicted RBP2.45□□□□□ -2.02
HHF1YBR009C TIM13P53299 105 aa2.45□□□□□ -2.02
HHF1YBR009C HHO1P53551 258 aa2.45□□□□□ -2.02
HHF1YBR009C YDR366CP87287 132 aa2.45□□□□□ -2.02
HHF1YBR009C SDH7Q04401 133 aa2.45□□□□□ -2.02
HHF1YBR009C ATP14Q12349 124 aa2.45□□□□□ -2.02
HHF1YBR009C FKS1P38631 1876 aaKnown RBP2.44□□□□□ -2.02
HHF1YBR009C TIR1P10863 254 aa2.44□□□□□ -2.02
HHF1YBR009C SPT14P32363 452 aa2.44□□□□□ -2.02
HHF1YBR009C PAN3P36102 679 aaPredicted RBP2.44□□□□□ -2.02
HHF1YBR009C MRPL17P36528 281 aa2.44□□□□□ -2.02
HHF1YBR009C TRS20P38334 175 aa2.44□□□□□ -2.02
HHF1YBR009C YER134CP40081 178 aa2.44□□□□□ -2.02
HHF1YBR009C YER188WP40103 239 aa2.44□□□□□ -2.02
HHF1YBR009C YNL200CP40165 246 aaKnown RBP2.44□□□□□ -2.02
HHF1YBR009C HPM1P40481 377 aa2.44□□□□□ -2.02
HHF1YBR009C GON7P46984 123 aa2.44□□□□□ -2.02
HHF1YBR009C APS3P47064 194 aa2.44□□□□□ -2.02
HHF1YBR009C YDR274CP87283 123 aa2.44□□□□□ -2.02
HHF1YBR009C DIG2Q03373 323 aaKnown RBP2.44□□□□□ -2.02
HHF1YBR009C VPS71Q03433 280 aa2.44□□□□□ -2.02
HHF1YBR009C CNL1Q06333 122 aa2.44□□□□□ -2.02
HHF1YBR009C YAR023CD6VPM8 179 aa2.43□□□□□ -2.02
HHF1YBR009C RPS19AP07280 144 aaKnown RBP2.43□□□□□ -2.02
HHF1YBR009C RPS19BP07281 144 aaPredicted RBP2.43□□□□□ -2.02
HHF1YBR009C YHR032W-AP0C5N6 59 aa2.43□□□□□ -2.02
HHF1YBR009C RPS1BP23248 255 aaKnown RBP2.43□□□□□ -2.02
HHF1YBR009C RPC19P28000 142 aaKnown RBP2.43□□□□□ -2.02
HHF1YBR009C MRP49P32388 137 aa2.43□□□□□ -2.02
HHF1YBR009C UGX2P32772 223 aa2.43□□□□□ -2.02
HHF1YBR009C FYV4P38783 130 aaPredicted RBP2.43□□□□□ -2.02
HHF1YBR009C CTR2P38865 189 aa2.43□□□□□ -2.02
HHF1YBR009C YER181CP40097 107 aa2.43□□□□□ -2.02
HHF1YBR009C ECO1P43605 281 aa2.43□□□□□ -2.02
HHF1YBR009C DSK2P48510 373 aa2.43□□□□□ -2.02
HHF1YBR009C YGL193CP53097 103 aa2.43□□□□□ -2.02
HHF1YBR009C YGR039WP53225 103 aa2.43□□□□□ -2.02
HHF1YBR009C SLM2P53955 656 aa2.43□□□□□ -2.02
HHF1YBR009C ARL3Q02804 198 aa2.43□□□□□ -2.02
HHF1YBR009C YMR099CQ03161 297 aaKnown RBP2.43□□□□□ -2.02
HHF1YBR009C SPG3Q04398 127 aaPredicted RBP2.43□□□□□ -2.02
HHF1YBR009C PRP11Q07350 266 aaPredicted RBP2.43□□□□□ -2.02
HHF1YBR009C FYV12Q08559 129 aa2.43□□□□□ -2.02
HHF1YBR009C ATO3Q12359 275 aa2.43□□□□□ -2.02
HHF1YBR009C SNT2P53127 1403 aa2.42□□□□□ -2.02
HHF1YBR009C YOR304C-AO14468 76 aa2.42□□□□□ -2.02
HHF1YBR009C CPA1P07258 411 aaKnown RBP2.42□□□□□ -2.02
HHF1YBR009C MRPL24P36525 258 aaPredicted RBP2.42□□□□□ -2.02
HHF1YBR009C VMA7P39111 118 aa2.42□□□□□ -2.02
HHF1YBR009C YJL218WP40892 196 aaKnown RBP2.42□□□□□ -2.02
HHF1YBR009C SMD3P43321 101 aaKnown RBP2.42□□□□□ -2.02
HHF1YBR009C YFR045WP43617 309 aa2.42□□□□□ -2.02
HHF1YBR009C AIF1P52923 378 aa2.42□□□□□ -2.02
HHF1YBR009C CGI121Q03705 181 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms