RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C IRC19Q07843 230 aa0.79□□□□□ -2.28
YAR009CYAR009C ISD11Q6Q560 94 aa0.79□□□□□ -2.28
YAR009CYAR009C YAL064W-BO13512 126 aa0.78□□□□□ -2.28
YAR009CYAR009C RPC40P07703 335 aaKnown RBP0.78□□□□□ -2.28
YAR009CYAR009C CBF1P17106 351 aa0.78□□□□□ -2.28
YAR009CYAR009C ARN2P38724 620 aa0.78□□□□□ -2.28
YAR009CYAR009C MPM1P40364 252 aa0.78□□□□□ -2.28
YAR009CYAR009C OST3P48439 350 aa0.78□□□□□ -2.28
YAR009CYAR009C YDR274CP87283 123 aa0.78□□□□□ -2.28
YAR009CYAR009C RGM1Q00453 211 aa0.78□□□□□ -2.28
YAR009CYAR009C VBA1Q04301 562 aa0.78□□□□□ -2.28
YAR009CYAR009C SFH1Q06168 426 aa0.78□□□□□ -2.28
YAR009CYAR009C SEC10Q06245 871 aa0.78□□□□□ -2.28
YAR009CYAR009C YKL070WP36087 169 aa0.78□□□□□ -2.28
YAR009CYAR009C PIR5P46999 287 aa0.78□□□□□ -2.28
YAR009CYAR009C FMP41P53889 259 aaKnown RBP0.78□□□□□ -2.28
YAR009CYAR009C RRP36Q12481 300 aaPredicted RBP0.78□□□□□ -2.28
YAR009CYAR009C FMP16Q12497 93 aa0.78□□□□□ -2.28
YAR009CYAR009C MEC1P38111 2368 aa0.78□□□□□ -2.28
YAR009CYAR009C DBF2P22204 572 aa0.78□□□□□ -2.28
YAR009CYAR009C PEX3P28795 441 aa0.78□□□□□ -2.28
YAR009CYAR009C RRF1P38771 230 aa0.78□□□□□ -2.28
YAR009CYAR009C TIM21P53220 239 aa0.78□□□□□ -2.28
YAR009CYAR009C TIM13P53299 105 aa0.78□□□□□ -2.28
YAR009CYAR009C SSU72P53538 206 aaPredicted RBP0.78□□□□□ -2.28
YAR009CYAR009C BRX1Q08235 291 aaKnown RBP0.78□□□□□ -2.28
YAR009CYAR009C YOL131WQ08270 108 aa0.78□□□□□ -2.28
YAR009CYAR009C YMR31P19955 123 aa0.77□□□□□ -2.29
YAR009CYAR009C RPB4P20433 221 aaPredicted RBP0.77□□□□□ -2.29
YAR009CYAR009C CLB6P32943 380 aa0.77□□□□□ -2.29
YAR009CYAR009C LSM4P40070 187 aaKnown RBP0.77□□□□□ -2.29
YAR009CYAR009C CCC1P47818 322 aa0.77□□□□□ -2.29
YAR009CYAR009C MPC1P53157 130 aaKnown RBP0.77□□□□□ -2.29
YAR009CYAR009C HOR7Q05827 59 aa0.77□□□□□ -2.29
YAR009CYAR009C YPL119C-AQ3E751 87 aa0.77□□□□□ -2.29
YAR009CYAR009C TIM12P32830 109 aa0.77□□□□□ -2.29
YAR009CYAR009C FMP33P46998 180 aa0.77□□□□□ -2.29
YAR009CYAR009C TAD2P47058 250 aa0.77□□□□□ -2.29
YAR009CYAR009C YNR062CP53748 327 aa0.77□□□□□ -2.29
YAR009CYAR009C ERV25P54837 211 aaKnown RBP0.77□□□□□ -2.29
YAR009CYAR009C FCF1Q05498 189 aaPredicted RBP0.77□□□□□ -2.29
YAR009CYAR009C LOA1Q06508 300 aa0.77□□□□□ -2.29
YAR009CYAR009C SPC3Q12133 184 aa0.77□□□□□ -2.29
YAR009CYAR009C YBL112CQ3E7Y4 105 aa0.77□□□□□ -2.29
YAR009CYAR009C SAS5Q99314 248 aa0.77□□□□□ -2.29
YAR009CYAR009C RFC2P40348 353 aa0.77□□□□□ -2.29
YAR009CYAR009C LIA1P47120 325 aaKnown RBP0.77□□□□□ -2.29
YAR009CYAR009C DSK2P48510 373 aa0.77□□□□□ -2.29
YAR009CYAR009C NIF3P53081 288 aa0.77□□□□□ -2.29
YAR009CYAR009C YGL101WP53144 215 aa0.77□□□□□ -2.29
YAR009CYAR009C GRH1Q04410 372 aaKnown RBP0.77□□□□□ -2.29
YAR009CYAR009C UPS1Q05776 175 aa0.77□□□□□ -2.29
YAR009CYAR009C AGC1Q12482 902 aa0.77□□□□□ -2.29
YAR009CYAR009C BOL1Q3E793 110 aa0.77□□□□□ -2.29
YAR009CYAR009C POF1P25576 258 aa0.76□□□□□ -2.29
YAR009CYAR009C IDH1P28834 360 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
YAR009CYAR009C TRR1P29509 319 aaKnown RBP0.76□□□□□ -2.29
YAR009CYAR009C SEC17P32602 292 aa0.76□□□□□ -2.29
YAR009CYAR009C RPL10P41805 221 aaKnown RBP0.76□□□□□ -2.29
YAR009CYAR009C PAC10P48363 199 aa0.76□□□□□ -2.29
YAR009CYAR009C SLX9P53251 210 aaPredicted RBP0.76□□□□□ -2.29
YAR009CYAR009C SPO77Q06134 477 aa0.76□□□□□ -2.29
YAR009CYAR009C GMC2Q06201 188 aa0.76□□□□□ -2.29
YAR009CYAR009C CTR3Q06686 241 aa0.76□□□□□ -2.29
YAR009CYAR009C PRM3Q08931 133 aa0.76□□□□□ -2.29
YAR009CYAR009C SMT3Q12306 101 aaKnown RBP0.76□□□□□ -2.29
YAR009CYAR009C YMR105W-AQ8TGS8 64 aa0.76□□□□□ -2.29
YAR009CYAR009C GRE3P38715 327 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
YAR009CYAR009C TEM1P38987 245 aa0.76□□□□□ -2.29
YAR009CYAR009C SMX2P40204 77 aaKnown RBP0.76□□□□□ -2.29
YAR009CYAR009C AGE2P40529 298 aa0.76□□□□□ -2.29
YAR009CYAR009C YGL204CP53089 101 aa0.76□□□□□ -2.29
YAR009CYAR009C KRE28Q04431 385 aa0.76□□□□□ -2.29
YAR009CYAR009C ARV1Q06541 321 aa0.76□□□□□ -2.29
YAR009CYAR009C YHR214C-EQ8TGK0 99 aa0.76□□□□□ -2.29
YAR009CYAR009C URA2P07259 2214 aaKnown RBP0.76□□□□□ -2.29
YAR009CYAR009C RPL26AP05743 127 aaKnown RBP0.76□□□□□ -2.29
YAR009CYAR009C BUB2P26448 306 aaPredicted RBP0.76□□□□□ -2.29
YAR009CYAR009C PRS4P38063 326 aaPredicted RBP0.76□□□□□ -2.29
YAR009CYAR009C NUP57P48837 541 aa0.76□□□□□ -2.29
YAR009CYAR009C RPL26BP53221 127 aaKnown RBP0.76□□□□□ -2.29
YAR009CYAR009C RPL24AP04449 155 aaKnown RBP0.75□□□□□ -2.29
YAR009CYAR009C MATALPHA1P0CY06 175 aa0.75□□□□□ -2.29
YAR009CYAR009C HMLALPHA1P0CY07 175 aa0.75□□□□□ -2.29
YAR009CYAR009C RPC19P28000 142 aaKnown RBP0.75□□□□□ -2.29
YAR009CYAR009C RNP1P32385 249 aa0.75□□□□□ -2.29
YAR009CYAR009C YJL218WP40892 196 aaKnown RBP0.75□□□□□ -2.29
YAR009CYAR009C AGX1P43567 385 aa0.75□□□□□ -2.29
YAR009CYAR009C ATC1Q04005 294 aa0.75□□□□□ -2.29
YAR009CYAR009C CTS2Q06350 511 aa0.75□□□□□ -2.29
YAR009CYAR009C VAM10Q08474 114 aa0.75□□□□□ -2.29
YAR009CYAR009C FIT3Q08907 204 aa0.75□□□□□ -2.29
YAR009CYAR009C SME1Q12330 94 aaPredicted RBP0.75□□□□□ -2.29
YAR009CYAR009C ATO3Q12359 275 aa0.75□□□□□ -2.29
YAR009CYAR009C PSF1Q12488 208 aa0.75□□□□□ -2.29
YAR009CYAR009C YCR101CP25607 182 aa0.75□□□□□ -2.29
YAR009CYAR009C SSO1P32867 290 aa0.75□□□□□ -2.29
YAR009CYAR009C YGR201CP42936 225 aa0.75□□□□□ -2.29
YAR009CYAR009C YFR054CP43622 192 aa0.75□□□□□ -2.29
YAR009CYAR009C YJL028WP47062 111 aa0.75□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 141.8 ms