RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LCHNA4D1U4 455 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 PPEF2O14830 753 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 ZNF263O14978 683 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 RPL9P32969 192 aaKnown RBP17.74■□□□□ 0.43
TPM1-219ENST00000559397 KIF11P52732 1056 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 UROC1Q96N76 676 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 TMEM175Q9BSA9 504 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 BZW2Q9Y6E2 419 aaKnown RBP17.74■□□□□ 0.43
TPM1-219ENST00000559397 SCN1AP35498 2009 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 KIAA1671Q9BY89 1806 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 PODXLO00592 558 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 LRRN2O75325 713 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 HLA-DRAP01903 254 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 GALTP07902 379 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 LINC00271P0C7V0 271 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 IGFBP6P24592 240 aaPredicted RBP17.74■□□□□ 0.43
TPM1-219ENST00000559397 POLR2BP30876 1174 aaKnown RBP17.74■□□□□ 0.43
TPM1-219ENST00000559397 RBP5P82980 135 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 NCOA4Q13772 614 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 FBXL13Q8NEE6 735 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 RABGGTAQ92696 567 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 SEMA4DQ92854 862 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 DDX27Q96GQ7 796 aaKnown RBP17.74■□□□□ 0.43
TPM1-219ENST00000559397 GPR88Q9GZN0 384 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 AGAP1Q9UPQ3 857 aa17.74■□□□□ 0.43
TPM1-219ENST00000559397 F8VZ95 297 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 ZC3H11AO75152 810 aaKnown RBP eCLIP17.73■□□□□ 0.43
TPM1-219ENST00000559397 PHACTR2O75167 634 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 KRT19P08727 400 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 STAT1P42224 750 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 BCAR1P56945 870 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 DRAP1Q14919 205 aaPredicted RBP17.73■□□□□ 0.43
TPM1-219ENST00000559397 CD300LGQ6UXG3 332 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 FIBCD1Q8N539 461 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 KIF18AQ8NI77 898 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 XYLT2Q9H1B5 865 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 RAB20Q9NX57 234 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 R3HCC1Q9Y3T6 440 aaKnown RBP17.73■□□□□ 0.43
TPM1-219ENST00000559397 PAXBP1Q9Y5B6 917 aa17.73■□□□□ 0.43
TPM1-219ENST00000559397 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.72■□□□□ 0.43
TPM1-219ENST00000559397 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.72■□□□□ 0.43
TPM1-219ENST00000559397 NRP1O14786 923 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 AKR1B10O60218 316 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 IPO7O95373 1038 aaKnown RBP17.72■□□□□ 0.43
TPM1-219ENST00000559397 ALDH2P05091 517 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 MYOGP15173 224 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 FERP16591 822 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 ANXA13P27216 316 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 SOX5P35711 763 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 OR1G1P47890 313 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 SLC11A1P49279 550 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 MYL6P60660 151 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 KLHL30Q0D2K2 578 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 SYT10Q6XYQ8 523 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 FMNL3Q8IVF7 1028 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 LRRC52Q8N7C0 313 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 C3orf58Q8NDZ4 430 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 CLP1Q92989 425 aaKnown RBP17.72■□□□□ 0.43
TPM1-219ENST00000559397 LZTFL1Q9NQ48 299 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 PCDHA11Q9Y5I1 949 aa17.72■□□□□ 0.43
TPM1-219ENST00000559397 STAU1O95793 577 aaKnown RBP17.71■□□□□ 0.43
TPM1-219ENST00000559397 PIK3CAP42336 1068 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 TRPC3Q13507 836 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 SPA17Q15506 151 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 TDRD12Q587J7 1177 aaKnown RBP17.71■□□□□ 0.43
TPM1-219ENST00000559397 DCLRE1AQ6PJP8 1040 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 GPIHBP1Q8IV16 184 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 ARHGEF19Q8IW93 802 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 DEF6Q9H4E7 631 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 HAUS4Q9H6D7 363 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 VRTNQ9H8Y1 702 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 MARCH5Q9NX47 278 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 FAN1Q9Y2M0 1017 aa17.71■□□□□ 0.43
TPM1-219ENST00000559397 F8W810 466 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 TMEM189-UBE2V1I3L0A0 370 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 SPTLC1O15269 473 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 FANCGO15287 622 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 ARHGEF15O94989 841 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 KIF4AO95239 1232 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 ABL1P00519 1130 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 ASS1P00966 412 aaKnown RBP17.71■□□□□ 0.42
TPM1-219ENST00000559397 ITGB1P05556 798 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 ATICP31939 592 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 PBX2P40425 430 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 PBX3P40426 434 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 VAV2P52735 878 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 TERF1P54274 439 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 CYP27A1Q02318 531 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 ARHGAP29Q52LW3 1261 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 ELMO3Q96BJ8 720 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 HPDLQ96IR7 371 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 PI4K2AQ9BTU6 479 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 PBX4Q9BYU1 374 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 UBE2TQ9NPD8 197 aaPredicted RBP17.71■□□□□ 0.42
TPM1-219ENST00000559397 YBX2Q9Y2T7 364 aaKnown RBP17.71■□□□□ 0.42
TPM1-219ENST00000559397 PRG3Q9Y2Y8 225 aaPredicted RBP17.71■□□□□ 0.42
TPM1-219ENST00000559397 PCDHA13Q9Y5I0 950 aa17.71■□□□□ 0.42
TPM1-219ENST00000559397 LINC01553A4QN01 128 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 RCCD1A6NED2 376 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 B3GAT3O94766 335 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms