RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ALKAL1Q6UXT8 129 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 Q6ZS52 159 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 MCPH1Q8NEM0 835 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 SNX29Q8TEQ0 813 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 HDAC7Q8WUI4 952 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 RSPH1Q8WYR4 309 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 RUBCNQ92622 972 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 C8orf76Q96K31 380 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 LRRC3BQ96PB8 259 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 ADPGKQ9BRR6 497 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 TCHPQ9BT92 498 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 MMTAG2Q9BU76 263 aaKnown RBP7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 DDX23Q9BUQ8 820 aaKnown RBP7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 BCO2Q9BYV7 579 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 NCDNQ9UBB6 729 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 TFIP11Q9UBB9 837 aaKnown RBP7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 LRWD1Q9UFC0 647 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 FBXL5Q9UKA1 691 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 CEP295Q9C0D2 2601 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 CACNA1GO43497 2377 aa7.49□□□□□ -1.21
PRPF40B-214ENST00000551320 ATG2BQ96BY7 2078 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 ANTXRLA6NF34 631 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 SLC38A8A6NNN8 435 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 SIAH2O43255 324 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 GDF9O60383 454 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 KINO60870 393 aaKnown RBP7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 PAPLNO95428 1278 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 LRG1P02750 347 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 CXCL8P10145 99 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 CCNE1P24864 410 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 ATXN1P54253 815 aaKnown RBP7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 SPEM2Q0P670 501 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 SLC10A6Q3KNW5 377 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 CTXN3Q4LDR2 81 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 NAIF1Q69YI7 327 aaPredicted RBP7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 ELMSAN1Q6PJG2 1045 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 TXNDC11Q6PKC3 985 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 VITQ6UXI7 678 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 PRR23BQ6ZRT6 265 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 VASH1Q7L8A9 365 aaPredicted RBP7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 PHTF2Q8N3S3 785 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 TTC16Q8NEE8 873 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 IFT74Q96LB3 600 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 PRIMPOLQ96LW4 560 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 TBC1D32Q96NH3 1257 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 PNMA5Q96PV4 448 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 KCTD15Q96SI1 283 aaPredicted RBP7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 C2orf40Q9H1Z8 148 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 SMOC1Q9H4F8 434 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 BRD9Q9H8M2 597 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 LMAN1LQ9HAT1 526 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 ZNF334Q9HCZ1 680 aaPredicted RBP7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 PTPRHQ9HD43 1115 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 KMT5AQ9NQR1 393 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 STK39Q9UEW8 545 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 DPP7Q9UHL4 492 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 CDV3Q9UKY7 258 aaKnown RBP7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 USP18Q9UMW8 372 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 SMG5Q9UPR3 1016 aaKnown RBP7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 MAP4K5Q9Y4K4 846 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 NUB1Q9Y5A7 615 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 INSL5Q9Y5Q6 135 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 ZFHX4Q86UP3 3567 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 CHD6Q8TD26 2715 aa7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 KMT2BQ9UMN6 2715 aaPredicted RBP7.48□□□□□ -1.21
PRPF40B-214ENST00000551320 FANCMQ8IYD8 2048 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 TICRRQ7Z2Z1 1910 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 USP24Q9UPU5 2620 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 A0A1W2PRU2 124 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 CARNS1A5YM72 827 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 CHURC1-FNTBB4DL54 471 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ATP9BO43861 1147 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 TBC1D4O60343 1298 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ABLIM3O94929 683 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 XRCC6P12956 609 aaKnown RBP eCLIP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 CPB1P15086 417 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 PTPN2P17706 415 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 TGM1P22735 817 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 U2AF2P26368 475 aaKnown RBP eCLIP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ELF1P32519 619 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 MCM4P33991 863 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 GRM5P41594 1212 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 MATR3P43243 847 aaKnown RBP eCLIP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 FNTBP49356 437 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 CYP4F8P98187 520 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 CREMQ03060 361 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 GRIN1Q05586 938 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 TNK2Q07912 1038 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 DUSP4Q13115 394 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 GNL2Q13823 731 aaKnown RBP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 ANKRD1Q15327 319 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 PCBP1Q15365 356 aaKnown RBP eCLIP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 SAFBQ15424 915 aaKnown RBP eCLIP7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 CCDC142Q17RM4 750 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 DCAF4L1Q3SXM0 396 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 MCTP1Q6DN14 999 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 RINT1Q6NUQ1 792 aa7.47□□□□□ -1.21
PRPF40B-214ENST00000551320 PKN3Q6P5Z2 889 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms