RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 ZNF560Q96MR9 790 aa14.3□□□□□ -0.12
PRDM2-213ENST00000503842 UROC1Q96N76 676 aa14.3□□□□□ -0.12
PRDM2-213ENST00000503842 MRPL9Q9BYD2 267 aaKnown RBP14.3□□□□□ -0.12
PRDM2-213ENST00000503842 STK33Q9BYT3 514 aa14.3□□□□□ -0.12
PRDM2-213ENST00000503842 GPR88Q9GZN0 384 aa14.3□□□□□ -0.12
PRDM2-213ENST00000503842 UBE2TQ9NPD8 197 aaPredicted RBP14.3□□□□□ -0.12
PRDM2-213ENST00000503842 CACNG4Q9UBN1 327 aa14.3□□□□□ -0.12
PRDM2-213ENST00000503842 MYO6Q9UM54 1294 aa14.3□□□□□ -0.12
PRDM2-213ENST00000503842 LUC7L2Q9Y383 392 aaKnown RBP14.3□□□□□ -0.12
PRDM2-213ENST00000503842 R3HCC1Q9Y3T6 440 aaKnown RBP14.3□□□□□ -0.12
PRDM2-213ENST00000503842 SPTLC1O15269 473 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 FECHP22830 423 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 TBXAS1P24557 533 aaPredicted RBP14.29□□□□□ -0.12
PRDM2-213ENST00000503842 KRT9P35527 623 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 ASPAP45381 313 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 TAF6P49848 677 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 CLCNKBP51801 687 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 ADKP55263 362 aaKnown RBP14.29□□□□□ -0.12
PRDM2-213ENST00000503842 MYO1EQ12965 1108 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 CUL2Q13617 745 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 DRAP1Q14919 205 aaPredicted RBP14.29□□□□□ -0.12
PRDM2-213ENST00000503842 RASIP1Q5U651 963 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 CD300LGQ6UXG3 332 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 CACNA2D4Q7Z3S7 1137 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 LRRC43Q8N309 656 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 UBR7Q8N806 425 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 SHC3Q92529 594 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 JAKMIP2Q96AA8 810 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 DNAJC7Q99615 494 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 ARID3AQ99856 593 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 PAAF1Q9BRP4 392 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 BCO2Q9BYV7 579 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 NRDE2Q9H7Z3 1164 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 CXXC1Q9P0U4 656 aaPredicted RBP14.29□□□□□ -0.12
PRDM2-213ENST00000503842 POLIQ9UNA4 740 aa14.29□□□□□ -0.12
PRDM2-213ENST00000503842 LRRC53A6NM62 1247 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 GOLGA8CPA6NN73 597 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 ZBBXA8MT70 800 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 F8VZ95 297 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 ACO1P21399 889 aaKnown RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 IGFBP6P24592 240 aaPredicted RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 HNRNPH3P31942 346 aaKnown RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 MAGEA10P43363 369 aaPredicted RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 AARSP49588 968 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■■■■ 61.8
PRDM2-213ENST00000503842 MFAP3P55082 362 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 LILRA4P59901 499 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 RNASELQ05823 741 aaKnown RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 RAPGEF1Q13905 1077 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 ARHGAP44Q17R89 818 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 WDR72Q3MJ13 1102 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 SV2CQ496J9 727 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 E4F1Q66K89 784 aaPredicted RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 LIMS2Q7Z4I7 341 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 TMCO2Q7Z6W1 182 aaPredicted RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 CMTR2Q8IYT2 770 aaKnown RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 C3orf58Q8NDZ4 430 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 ZNF397Q8NF99 534 aaPredicted RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 OR8K1Q8NGG5 319 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 FAM193BQ96PV7 902 aaPredicted RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 SPAG5Q96R06 1193 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 PANX2Q96RD6 677 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 NUCKS1Q9H1E3 243 aaKnown RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 CYP3A43Q9HB55 503 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 ABHD10Q9NUJ1 306 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 GDAP2Q9NXN4 497 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 HCSTQ9UBK5 93 aa14.28□□□□□ -0.12
PRDM2-213ENST00000503842 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
PRDM2-213ENST00000503842 TMEM189-UBE2V1I3L0A0 370 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 PTMAP06454 111 aaKnown RBP14.27□□□□□ -0.13
PRDM2-213ENST00000503842 P4HA1P13674 534 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 PAX3P23760 479 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 SOX5P35711 763 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 TNNC1P63316 161 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 HTRA4P83105 476 aaPredicted RBP14.27□□□□□ -0.13
PRDM2-213ENST00000503842 PAN2Q504Q3 1202 aaKnown RBP14.27□□□□□ -0.13
PRDM2-213ENST00000503842 DCLRE1AQ6PJP8 1040 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 NUDT18Q6ZVK8 323 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 PHOSPHO2Q8TCD6 241 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 RABGGTAQ92696 567 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 SYN2Q92777 582 aaPredicted RBP14.27□□□□□ -0.13
PRDM2-213ENST00000503842 SLC9A7Q96T83 725 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 TMEM175Q9BSA9 504 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 SDCBP2Q9H190 292 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 MTIF3Q9H2K0 278 aaKnown RBP14.27□□□□□ -0.13
PRDM2-213ENST00000503842 FAM124BQ9H5Z6 455 aaPredicted RBP14.27□□□□□ -0.13
PRDM2-213ENST00000503842 CWH43Q9H720 699 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 SMYD3Q9H7B4 428 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 AIPL1Q9NZN9 384 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 DNAJB4Q9UDY4 337 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 CNTN6Q9UQ52 1028 aa14.27□□□□□ -0.13
PRDM2-213ENST00000503842 KPNA7A9QM74 516 aa14.26□□□□□ -0.13
PRDM2-213ENST00000503842 SMAPO00193 183 aa14.26□□□□□ -0.13
PRDM2-213ENST00000503842 FOXN3O00409 490 aaPredicted RBP14.26□□□□□ -0.13
PRDM2-213ENST00000503842 ZMYND10O75800 440 aa14.26□□□□□ -0.13
PRDM2-213ENST00000503842 B3GAT3O94766 335 aa14.26□□□□□ -0.13
PRDM2-213ENST00000503842 CLSTN1O94985 981 aa14.26□□□□□ -0.13
PRDM2-213ENST00000503842 KIF4AO95239 1232 aa14.26□□□□□ -0.13
PRDM2-213ENST00000503842 GJB5O95377 273 aa14.26□□□□□ -0.13
PRDM2-213ENST00000503842 PNMA6AP0CW24 399 aaPredicted RBP14.26□□□□□ -0.13
PRDM2-213ENST00000503842 STAT1P42224 750 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms