RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 TCERG1LQ5VWI1 586 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 PTCRAQ6ISU1 281 aaPredicted RBP16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 TAS1R1Q7RTX1 841 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 TMC7Q7Z402 723 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 MRPL43Q8N983 215 aaKnown RBP16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 HPDLQ96IR7 371 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 XYLT2Q9H1B5 865 aa16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 NSUN3Q9H649 340 aaKnown RBP16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 MRPL17Q9NRX2 175 aaKnown RBP16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 R3HCC1Q9Y3T6 440 aaKnown RBP16.07■□□□□ 0.16
CDC42SE1-203ENST00000470278 ZDBF2Q9HCK1 2354 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 FSD2A1L4K1 749 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 C2orf71A6NGG8 1288 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 I3L4J1 428 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 TULP1O00294 542 aaPredicted RBP16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 P4HA2O15460 535 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 PHACTR2O75167 634 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 CST3P01034 146 aaPredicted RBP16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 CYP11A1P05108 521 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 ODC1P11926 461 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 TYMPP19971 482 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 EEF1GP26641 437 aaKnown RBP16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 TKTP29401 623 aaKnown RBP16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 DLX2Q07687 328 aaPredicted RBP16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 TRPC3Q13507 836 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 NCOA4Q13772 614 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 CTC1Q2NKJ3 1217 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 PLPP4Q5VZY2 271 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 KIAA1841Q6NSI8 718 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 GJD3Q8N144 294 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 APPL2Q8NEU8 664 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 SPATA18Q8TC71 538 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 TAF4BQ92750 862 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 PPP2R3CQ969Q6 453 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 FAM122AQ96E09 287 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 SENP8Q96LD8 212 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 RXFP1Q9HBX9 757 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 DSEQ9UL01 958 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 COQ4Q9Y3A0 265 aa16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 ARIH1Q9Y4X5 557 aaPredicted RBP16.06■□□□□ 0.16
CDC42SE1-203ENST00000470278 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 HIDE1A8MVS5 230 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 N4BP1O75113 896 aaKnown RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 OAZ2O95190 189 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 ASS1P00966 412 aaKnown RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 GTF2F1P35269 517 aaKnown RBP eCLIP16.05■□□□□ 0.169e-8■■■□□ 17.1
CDC42SE1-203ENST00000470278 PIK3CAP42336 1068 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 ZNF165P49910 485 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 ZP2Q05996 745 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 MRPL58Q14197 206 aaKnown RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 NCAPHQ15003 741 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 CBWD6Q4V339 395 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 CBWD3Q5JTY5 395 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 CBWD5Q5RIA9 395 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 VARS2Q5ST30 1063 aaKnown RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 SCARA3Q6AZY7 606 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 DSTYKQ6XUX3 929 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 ANKS3Q6ZW76 656 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 DPH6Q7L8W6 267 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 LIMS2Q7Z4I7 341 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 TOP6BLQ8N6T0 577 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 FBXL13Q8NEE6 735 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 TAS1R2Q8TE23 839 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 PABPC5Q96DU9 382 aaKnown RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 B3GALT6Q96L58 329 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 CDCA3Q99618 268 aaPredicted RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 OXCT2Q9BYC2 517 aaPredicted RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 FNIP2Q9P278 1114 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 MTRRQ9UBK8 725 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 PCDHGC5Q9Y5F6 944 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 BACE2Q9Y5Z0 518 aa16.05■□□□□ 0.16
CDC42SE1-203ENST00000470278 KMT2EQ8IZD2 1858 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 C19orf67A6NJJ6 358 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 TBX10O75333 385 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 C1RP00736 705 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 ZNF18P17022 549 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 FMO5P49326 533 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 MYL6P60660 151 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 YWHAHQ04917 246 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 HYAL1Q12794 435 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 SGSM1Q2NKQ1 1148 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 ZNF699Q32M78 642 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 TMEM86AQ8N2M4 240 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 LNX1Q8TBB1 728 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 MICAL1Q8TDZ2 1067 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 RIN2Q8WYP3 895 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 FAXDC2Q96IV6 333 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 EMILIN2Q9BXX0 1053 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 IMPG2Q9BZV3 1241 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 MMRN2Q9H8L6 949 aa16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 MAGEC2Q9UBF1 373 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE1-203ENST00000470278 KCNJ18B7U540 433 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 H7C4K7 107 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 CYB561D2O14569 222 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms