RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 C15orf39Q6ZRI6 1047 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 LRRIQ3A6PVS8 624 aaPredicted RBP11.5□□□□□ -0.57
UBR4-208ENST00000459947 HIDE1A8MVS5 230 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 TACC1O75410 805 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 FGF19O95750 216 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 CAVIN2O95810 425 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 MXI1P50539 228 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 CLCN4P51793 760 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 KCNC3Q14003 757 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 KLHL40Q2TBA0 621 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 TJAP1Q5JTD0 557 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 RTP2Q5QGT7 225 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 ANKRD40Q6AI12 368 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 ADGRD2Q7Z7M1 963 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 ELMOD1Q8N336 334 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 ANKRD20A12PQ8NF67 263 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 VN1R2Q8NFZ6 395 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 HASPINQ8TF76 798 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 IKZF4Q9H2S9 585 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 THAP9Q9H5L6 903 aa11.5□□□□□ -0.57
UBR4-208ENST00000459947 BIN1O00499 593 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 PIK3CAP42336 1068 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 ZNF699Q32M78 642 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 WDR44Q5JSH3 913 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 KLHL10Q6JEL2 608 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
UBR4-208ENST00000459947 C3orf58Q8NDZ4 430 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 HCFC2Q9Y5Z7 792 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 TBC1D4O60343 1298 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 AKAP3O75969 853 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 WARSP23381 471 aaKnown RBP11.49□□□□□ -0.57
UBR4-208ENST00000459947 NCOA4Q13772 614 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 KREMEN2Q8NCW0 462 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 SNX25Q9H3E2 840 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 FBXL5Q9UKA1 691 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 C2CD2LO14523 706 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 ZMYND10O75800 440 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 C4BPAP04003 597 aaKnown RBP11.49□□□□□ -0.57
UBR4-208ENST00000459947 CPB1P15086 417 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 PPM1LQ5SGD2 360 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 ATAT1Q5SQI0 421 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 LILRA6Q6PI73 481 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 ZNF461Q8TAF7 563 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 SPPL2BQ8TCT7 592 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 MSLNLQ96KJ4 702 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 ACBD6Q9BR61 282 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 CXCL16Q9H2A7 254 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 ABCB6Q9NP58 842 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 ASB3Q9Y575 518 aa11.49□□□□□ -0.57
UBR4-208ENST00000459947 GPR17Q13304 367 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 EP400NLQ6ZTU2 488 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.48□□□□□ -0.57
UBR4-208ENST00000459947 TCEAL8Q8IYN2 117 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 ADAM7Q9H2U9 754 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 EHD2Q9NZN4 543 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 SIX4Q9UIU6 781 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 ZMYM5Q9UJ78 669 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 CDH9Q9ULB4 789 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 DAAM1Q9Y4D1 1078 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 TULP1O00294 542 aaPredicted RBP11.48□□□□□ -0.57
UBR4-208ENST00000459947 TUFMP49411 452 aaKnown RBP11.48□□□□□ -0.57
UBR4-208ENST00000459947 GUCY2FP51841 1108 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 C4orf50Q6ZRC1 276 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 TAS1R1Q7RTX1 841 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 RBM23Q86U06 439 aaKnown RBP11.48□□□□□ -0.57
UBR4-208ENST00000459947 ADGRF2Q8IZF7 708 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 OR5B17Q8NGF7 314 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 GPT2Q8TD30 523 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 CLSTN3Q9BQT9 956 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 MAN1C1Q9NR34 630 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 NR2E1Q9Y466 385 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 ZFP37Q9Y6Q3 630 aaPredicted RBP11.48□□□□□ -0.57
UBR4-208ENST00000459947 KCNA5P22460 613 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 OR1D2P34982 312 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 CASP4P49662 377 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 TCERG1LQ5VWI1 586 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 PRSS55Q6UWB4 352 aaPredicted RBP11.48□□□□□ -0.57
UBR4-208ENST00000459947 UNC93AQ86WB7 457 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 FBXL13Q8NEE6 735 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 ASB2Q96Q27 587 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 CDY1Q9Y6F8 540 aa11.48□□□□□ -0.57
UBR4-208ENST00000459947 ABLIM3O94929 683 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 CLSTN1O94985 981 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 LIMS2Q7Z4I7 341 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 BORCS6Q96GS4 357 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 FUBP3Q96I24 572 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBR4-208ENST00000459947 TNIP3Q96KP6 325 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 ZCWPW1Q9H0M4 648 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 HLA-DRAP01903 254 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 LRG1P02750 347 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 TBXAS1P24557 533 aaPredicted RBP11.47□□□□□ -0.57
UBR4-208ENST00000459947 ROR1Q01973 937 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 ITIH5Q86UX2 942 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 SMRP1Q8NCR6 262 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 ZSWIM2Q8NEG5 633 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
UBR4-208ENST00000459947 ENOX1Q8TC92 643 aaKnown RBP11.47□□□□□ -0.57
UBR4-208ENST00000459947 AUTS2Q8WXX7 1259 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms