RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CAGE1Q8TC20 777 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 ELMO3Q96BJ8 720 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 AGO3Q9H9G7 860 aaKnown RBP12.9□□□□□ -0.34
USF1-203ENST00000368021 ERVK-5Q9HDB9 667 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 DPP3Q9NY33 737 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 PCDHB2Q9Y5E7 798 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 BTNL10A8MVZ5 291 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 KRT19P08727 400 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 KRT5P13647 590 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 SELPP16109 830 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 YWHAEP62258 255 aaKnown RBP12.9□□□□□ -0.34
USF1-203ENST00000368021 RBP5P82980 135 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 SATB1Q01826 763 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 NFX1Q12986 1120 aaKnown RBP12.9□□□□□ -0.34
USF1-203ENST00000368021 PAK2Q13177 524 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 LPIN1Q14693 890 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 ZNF667Q5HYK9 610 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 SCARA3Q6AZY7 606 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 LRRC8DQ7L1W4 858 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 OTOP2Q7RTS6 562 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 RNF10Q8N5U6 811 aaKnown RBP12.9□□□□□ -0.34
USF1-203ENST00000368021 IRX2Q9BZI1 471 aaPredicted RBP12.9□□□□□ -0.34
USF1-203ENST00000368021 PRO3102Q9H379 93 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 FAM105AQ9NUU6 356 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 TRIM10Q9UDY6 481 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 DNAI1Q9UI46 699 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 PADI3Q9ULW8 664 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 LTBP2Q14767 1821 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 XPOTO43592 962 aaKnown RBP12.89□□□□□ -0.35
USF1-203ENST00000368021 GZMAP12544 262 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 P4HA1P13674 534 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
USF1-203ENST00000368021 ASPAP45381 313 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
USF1-203ENST00000368021 RAB27AP51159 221 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 ZNF132P52740 706 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 CDR2Q01850 454 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 PPIGQ13427 754 aaKnown RBP eCLIP12.89□□□□□ -0.353e-6■■■■□ 19.3
USF1-203ENST00000368021 ZNF365Q70YC5 407 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 NOP9Q86U38 636 aaKnown RBP12.89□□□□□ -0.35
USF1-203ENST00000368021 TDHQ8IZJ6 230 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 BEST2Q8NFU1 509 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 DDX1Q92499 740 aaKnown RBP12.89□□□□□ -0.35
USF1-203ENST00000368021 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 ZMAT2Q96NC0 199 aaKnown RBP12.89□□□□□ -0.35
USF1-203ENST00000368021 WDR24Q96S15 920 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.89□□□□□ -0.351e-13■■□□□ 11.9
USF1-203ENST00000368021 BCO2Q9BYV7 579 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 UBQLN1Q9UMX0 589 aaKnown RBP12.89□□□□□ -0.35
USF1-203ENST00000368021 TFR2Q9UP52 801 aa12.89□□□□□ -0.35
USF1-203ENST00000368021 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.89□□□□□ -0.35
USF1-203ENST00000368021 SMIM28A0A1B0GU29 152 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 FANCGO15287 622 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 ZNF623O75123 536 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 CLSTN1O94985 981 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 GHRP10912 638 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 CHRNB2P17787 502 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 CYP3A5P20815 502 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 AKAP5P24588 427 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 CD52P31358 61 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 BMP8BP34820 402 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 DSC3Q14574 896 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 WDR72Q3MJ13 1102 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 TRAF7Q6Q0C0 670 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 TMEM270Q6UE05 265 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 FAM43BQ6ZT52 329 aaPredicted RBP12.88□□□□□ -0.35
USF1-203ENST00000368021 RPUSD2Q8IZ73 545 aaKnown RBP12.88□□□□□ -0.35
USF1-203ENST00000368021 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 SLC20A1Q8WUM9 679 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 HPDLQ96IR7 371 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 OSBPL7Q9BZF2 842 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 RNF39Q9H2S5 420 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 IL23AQ9NPF7 189 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 PARP2Q9UGN5 583 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 PCDHB4Q9Y5E5 795 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 DUSP10Q9Y6W6 482 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 NBNO60934 754 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 H2AFZP0C0S5 128 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 FMO1Q01740 532 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 MYO1EQ12965 1108 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 MBTPS1Q14703 1052 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 GPNMBQ14956 572 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 H2AFVQ71UI9 128 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 MRPL10Q7Z7H8 261 aaKnown RBP12.88□□□□□ -0.35
USF1-203ENST00000368021 TTC39CQ8N584 583 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 RBBP8NLQ8NC74 664 aaPredicted RBP12.88□□□□□ -0.35
USF1-203ENST00000368021 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 VWCEQ96DN2 955 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 APOL6Q9BWW8 343 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 CISHQ9NSE2 258 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 SCN5AQ14524 2016 aa12.88□□□□□ -0.35
USF1-203ENST00000368021 A0A0A6YYK5 440 aaPredicted RBP12.87□□□□□ -0.35
USF1-203ENST00000368021 A0A0U1RQF3 1178 aa12.87□□□□□ -0.35
USF1-203ENST00000368021 ANO9A1A5B4 782 aa12.87□□□□□ -0.35
USF1-203ENST00000368021 MACROD2A1Z1Q3 448 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms