RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 DRS2P39524 1355 aa-1.23□□□□□ -2.61
snR48snR48 ARO7P32178 256 aa-1.24□□□□□ -2.61
snR48snR48 MPC3P53311 146 aa-1.24□□□□□ -2.61
snR48snR48 KEI1Q06346 221 aa-1.24□□□□□ -2.61
snR48snR48 UTP30P36144 274 aaKnown RBP-1.25□□□□□ -2.61
snR48snR48 UBC12P52491 188 aa-1.25□□□□□ -2.61
snR48snR48 SBH2P52871 88 aa-1.25□□□□□ -2.61
snR48snR48 YDR286CQ05530 114 aa-1.25□□□□□ -2.61
snR48snR48 RNH202Q05635 350 aa-1.25□□□□□ -2.61
snR48snR48 YLR173WQ06247 608 aa-1.25□□□□□ -2.61
snR48snR48 COX2P00410 251 aa-1.26□□□□□ -2.61
snR48snR48 URA5P13298 226 aaKnown RBP-1.26□□□□□ -2.61
snR48snR48 BET1P22804 142 aa-1.26□□□□□ -2.61
snR48snR48 SEC17P32602 292 aa-1.26□□□□□ -2.61
snR48snR48 YKL075CP36083 450 aa-1.26□□□□□ -2.61
snR48snR48 MOB1P40484 314 aa-1.26□□□□□ -2.61
snR48snR48 AIM25P47140 327 aa-1.26□□□□□ -2.61
snR48snR48 THG1P53215 237 aaKnown RBP-1.26□□□□□ -2.61
snR48snR48 IRC23Q08416 157 aa-1.26□□□□□ -2.61
snR48snR48 POR1P04840 283 aaKnown RBP-1.27□□□□□ -2.61
snR48snR48 YKR070WP36151 352 aaKnown RBP-1.27□□□□□ -2.61
snR48snR48 COX20Q04935 205 aa-1.27□□□□□ -2.61
snR48snR48 ATP15P21306 62 aa-1.28□□□□□ -2.61
snR48snR48 IDH1P28834 360 aaKnown RBP RIP-Chip data-1.28□□□□□ -2.61not detected
snR48snR48 GSP2P32836 220 aaKnown RBP-1.28□□□□□ -2.61
snR48snR48 SFK1P35735 353 aa-1.28□□□□□ -2.61
snR48snR48 AST2P39945 430 aaKnown RBP-1.28□□□□□ -2.61
snR48snR48 PRM8P53174 237 aa-1.28□□□□□ -2.61
snR48snR48 GET1P53192 235 aa-1.28□□□□□ -2.61
snR48snR48 PGC1Q08959 321 aa-1.28□□□□□ -2.61
snR48snR48 ROM2P51862 1356 aaKnown RBP-1.29□□□□□ -2.62
snR48snR48 MSN4P33749 630 aa-1.29□□□□□ -2.62
snR48snR48 BLM10P43583 2143 aa-1.29□□□□□ -2.62
snR48snR48 YJR149WP47177 404 aa-1.29□□□□□ -2.62
snR48snR48 NSA1P53136 463 aaPredicted RBP-1.29□□□□□ -2.62
snR48snR48 MGR2Q02889 113 aa-1.29□□□□□ -2.62
snR48snR48 STF1P01098 86 aa-1.3□□□□□ -2.62
snR48snR48 TCP1P12612 559 aaKnown RBP-1.3□□□□□ -2.62
snR48snR48 KSS1P14681 368 aa-1.3□□□□□ -2.62
snR48snR48 PTM1P32857 523 aa-1.3□□□□□ -2.62
snR48snR48 UBC6P33296 250 aaPredicted RBP-1.3□□□□□ -2.62
snR48snR48 MCM22P47167 239 aa-1.3□□□□□ -2.62
snR48snR48 TRM9P49957 279 aa-1.3□□□□□ -2.62
snR48snR48 YDR249CQ03787 373 aa-1.3□□□□□ -2.62
snR48snR48 CSM4Q08955 156 aa-1.3□□□□□ -2.62
snR48snR48 REX3Q12090 404 aa-1.3□□□□□ -2.62
snR48snR48 GET4Q12125 312 aa-1.3□□□□□ -2.62
snR48snR48 SEY1Q99287 776 aa-1.3□□□□□ -2.62
snR48snR48 RPL24AP04449 155 aaKnown RBP-1.31□□□□□ -2.62
snR48snR48 POL30P15873 258 aaKnown RBP-1.31□□□□□ -2.62
snR48snR48 STF2P16965 84 aa-1.31□□□□□ -2.62
snR48snR48 ETR1P38071 380 aa-1.31□□□□□ -2.62
snR48snR48 YGL235WP53071 178 aa-1.31□□□□□ -2.62
snR48snR48 RRN5Q02983 363 aa-1.31□□□□□ -2.62
snR48snR48 SEN15Q04675 128 aa-1.31□□□□□ -2.62
snR48snR48 FCY1Q12178 158 aa-1.31□□□□□ -2.62
snR48snR48 YIL177CP40434 1758 aa-1.31□□□□□ -2.62
snR48snR48 YJL225CP40889 1758 aa-1.31□□□□□ -2.62
snR48snR48 RPB3P16370 318 aaKnown RBP-1.32□□□□□ -2.62
snR48snR48 DDR48P18899 430 aaKnown RBP-1.32□□□□□ -2.62
snR48snR48 PPA2P28239 310 aa-1.32□□□□□ -2.62
snR48snR48 RMD6P39975 231 aa-1.32□□□□□ -2.62
snR48snR48 ARP3P47117 449 aaKnown RBP-1.32□□□□□ -2.62
snR48snR48 EMC2P47133 292 aaKnown RBP-1.32□□□□□ -2.62
snR48snR48 PDR17P53844 350 aa-1.32□□□□□ -2.62
snR48snR48 YNL122CP53921 115 aaPredicted RBP-1.32□□□□□ -2.62
snR48snR48 SDO1Q07953 250 aaKnown RBP-1.32□□□□□ -2.62
snR48snR48 PST2Q12335 198 aaKnown RBP-1.32□□□□□ -2.62
snR48snR48 YIL002W-AQ3E7Z5 69 aa-1.32□□□□□ -2.62
snR48snR48 SNF2P22082 1703 aa-1.32□□□□□ -2.62
snR48snR48 CFT1Q06632 1357 aaKnown RBP-1.33□□□□□ -2.62
snR48snR48 IKI3Q06706 1349 aaKnown RBP-1.33□□□□□ -2.62
snR48snR48 CKS1P20486 150 aaKnown RBP-1.33□□□□□ -2.62
snR48snR48 CLG1P35190 452 aa-1.33□□□□□ -2.62
snR48snR48 HTD2P38790 280 aaKnown RBP-1.33□□□□□ -2.62
snR48snR48 CIN5P40917 295 aa-1.33□□□□□ -2.62
snR48snR48 YAR1P46683 200 aa-1.33□□□□□ -2.62
snR48snR48 RRP17Q04031 235 aaPredicted RBP-1.33□□□□□ -2.62
snR48snR48 CDC123Q05791 360 aa-1.33□□□□□ -2.62
snR48snR48 RPS22AP0C0W1 130 aaKnown RBP-1.34□□□□□ -2.62
snR48snR48 YMR295CQ03559 197 aa-1.34□□□□□ -2.62
snR48snR48 RNH1Q04740 348 aa-1.34□□□□□ -2.62
snR48snR48 YOR072WQ08486 104 aa-1.34□□□□□ -2.62
snR48snR48 RPS22BQ3E7Y3 130 aaKnown RBP-1.34□□□□□ -2.62
snR48snR48 DUR1,2P32528 1835 aaKnown RBP-1.34□□□□□ -2.62
snR48snR48 CDC28P00546 298 aaKnown RBP-1.35□□□□□ -2.63
snR48snR48 KIN28P06242 306 aa-1.35□□□□□ -2.63
snR48snR48 PRE1P22141 198 aaKnown RBP-1.35□□□□□ -2.63
snR48snR48 YCR023CP25351 611 aa-1.35□□□□□ -2.63
snR48snR48 ASF2P32448 525 aaPredicted RBP-1.35□□□□□ -2.63
snR48snR48 YBL010CP32788 280 aa-1.35□□□□□ -2.63
snR48snR48 SHB17P36136 271 aaKnown RBP-1.35□□□□□ -2.63
snR48snR48 PAM17P36147 197 aa-1.35□□□□□ -2.63
snR48snR48 CUE1P38428 203 aa-1.35□□□□□ -2.63
snR48snR48 ERG28P40030 148 aa-1.35□□□□□ -2.63
snR48snR48 POG1P40473 351 aa-1.35□□□□□ -2.63
snR48snR48 YOR034C-AQ3E735 80 aa-1.35□□□□□ -2.63
snR48snR48 YHR214C-EQ8TGK0 99 aa-1.35□□□□□ -2.63
snR48snR48 YPK2P18961 677 aa-1.36□□□□□ -2.63
snR48snR48 TCA17P32613 152 aa-1.36□□□□□ -2.63
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms