RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	RPS28A	Q3E7X9	67 aa	Predicted RBP	1.92	□□□□□ -2.1
RSA1	YPL193W	REP1	P03871	373 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	ERD1	P16151	362 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	PHO13	P19881	312 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	INO2	P26798	304 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	HSP150	P32478	413 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	PTM1	P32857	523 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	UPS2	P35200	230 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	YBR062C	P38239	180 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	ARN2	P38724	620 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	SEN34	P39707	275 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	KRE29	P40026	464 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	COG3	P40094	801 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	YFL051C	P43552	160 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	LCB3	P47013	409 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	PGU1	P47180	361 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	BOL2	P53082	120 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	ALG13	P53178	202 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	VHT1	P53241	593 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	PDR17	P53844	350 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	YMR279C	Q03263	540 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	MAK3	Q03503	176 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	TDA1	Q03533	586 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	SEI1	Q06058	285 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	YLR446W	Q06204	433 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	MRX9	Q07349	420 aa	Known RBP	1.91	□□□□□ -2.1
RSA1	YPL193W	YPD1	Q07688	167 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	YLR036C	Q07986	203 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	FCY22	Q12119	530 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	YPL245W	Q12179	454 aa	Known RBP	1.91	□□□□□ -2.1
RSA1	YPL193W	PCL9	Q12477	304 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	YPL119C-A	Q3E751	87 aa		1.91	□□□□□ -2.1
RSA1	YPL193W	YDL085C-A	Q3E7B7	68 aa	Known RBP	1.91	□□□□□ -2.1
RSA1	YPL193W	YAL064W-B	O13512	126 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	PET54	P10834	293 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	IDP1	P21954	428 aa	Known RBP	1.9	□□□□□ -2.11
RSA1	YPL193W	SEC14	P24280	304 aa	Known RBP	1.9	□□□□□ -2.11
RSA1	YPL193W	RPL16A	P26784	199 aa	Known RBP	1.9	□□□□□ -2.11
RSA1	YPL193W	URA10	P30402	227 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	PDC2	P32896	925 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	KTI12	P34253	313 aa	Known RBP	1.9	□□□□□ -2.11
RSA1	YPL193W	MRPL3	P36516	390 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	MRPL28	P36527	147 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	YBR241C	P38142	488 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	YHL037C	P38733	133 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	EGT2	P42835	1041 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	PRM10	P42946	383 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	MOB2	P43563	287 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	ALB1	P47019	175 aa	Predicted RBP	1.9	□□□□□ -2.11
RSA1	YPL193W	CDH1	P53197	566 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	YNR066C	P53752	436 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	YML108W	Q03759	105 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	YMR166C	Q03829	368 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	PLP1	Q04004	230 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	API2	Q04413	109 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	DXO1	Q06349	442 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	NOC4	Q06512	552 aa	Predicted RBP	1.9	□□□□□ -2.11
RSA1	YPL193W	YLR031W	Q07978	186 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	DAS2	Q12084	232 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	SFM1	Q12314	213 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	BBP1	Q12365	385 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	RDI1	Q12434	202 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	AGC1	Q12482	902 aa		1.9	□□□□□ -2.11
RSA1	YPL193W	HEM4	P06174	275 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	CMD1	P06787	147 aa	Known RBP	1.89	□□□□□ -2.11
RSA1	YPL193W	MET2	P08465	486 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	COS2	P0CX12	379 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	COS3	P0CX13	379 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	NHP6A	P11632	93 aa	Known RBP	1.89	□□□□□ -2.11
RSA1	YPL193W	GCN3	P14741	305 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	CPT1	P17898	393 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	SEC22	P22214	214 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	1.89	□□□□□ -2.11	not detected
RSA1	YPL193W	CLG1	P35190	452 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	MRPL39	P36533	70 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	ECM33	P38248	429 aa	Known RBP	1.89	□□□□□ -2.11
RSA1	YPL193W	YPC1	P38298	316 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	GOS1	P38736	223 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	AST2	P39945	430 aa	Known RBP	1.89	□□□□□ -2.11
RSA1	YPL193W	PDS1	P40316	373 aa	Predicted RBP	1.89	□□□□□ -2.11
RSA1	YPL193W	COS4	P43542	379 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	SNX4	P47057	423 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	TPN1	P53099	579 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	COG5	P53951	403 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	SDC1	Q03323	175 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	YML018C	Q03730	393 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	PKR1	Q03880	122 aa	Known RBP	1.89	□□□□□ -2.11
RSA1	YPL193W	GMC1	Q04399	608 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	YMR315W	Q04869	349 aa	Known RBP	1.89	□□□□□ -2.11
RSA1	YPL193W	DPP1	Q05521	289 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	PEX30	Q06169	523 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	MCT1	Q12283	360 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	YLR126C	Q12288	251 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	RPN6	Q12377	434 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	MRX4	Q12467	430 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	MHT1	Q12525	324 aa		1.89	□□□□□ -2.11
RSA1	YPL193W	YHR214C-D	P0CX93	97 aa		1.88	□□□□□ -2.11
RSA1	YPL193W	RPB9	P27999	122 aa		1.88	□□□□□ -2.11
RSA1	YPL193W	FUN26	P31381	517 aa		1.88	□□□□□ -2.11
RSA1	YPL193W	PHA2	P32452	334 aa		1.88	□□□□□ -2.11

Retrieved 100 of 5,963 RNA–protein pairs in 122.4 ms