RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W USB1Q12208 290 aaKnown RBP1.76□□□□□ -2.13
UBP16YPL072W ATG2P53855 1592 aa1.75□□□□□ -2.13
UBP16YPL072W RKR1Q04781 1562 aa1.75□□□□□ -2.13
UBP16YPL072W GEA1P47102 1408 aaPredicted RBP1.75□□□□□ -2.13
UBP16YPL072W RPL35AP0CX84 120 aaKnown RBP1.75□□□□□ -2.13
UBP16YPL072W RPL35BP0CX85 120 aaKnown RBP1.75□□□□□ -2.13
UBP16YPL072W DPM1P14020 267 aaKnown RBP1.75□□□□□ -2.13
UBP16YPL072W MRPS28P21771 286 aa1.75□□□□□ -2.13
UBP16YPL072W MTW1P39731 289 aa1.75□□□□□ -2.13
UBP16YPL072W SNX4P47057 423 aa1.75□□□□□ -2.13
UBP16YPL072W TSC3Q3E790 80 aa1.75□□□□□ -2.13
UBP16YPL072W PEP1P32319 1579 aa1.75□□□□□ -2.13
UBP16YPL072W SPP41P38904 1435 aa1.74□□□□□ -2.13
UBP16YPL072W TSC11P40061 1430 aa1.74□□□□□ -2.13
UBP16YPL072W MYO4P32492 1471 aa1.74□□□□□ -2.13
UBP16YPL072W SNQ2P32568 1501 aaKnown RBP1.74□□□□□ -2.13
UBP16YPL072W MBF1O14467 151 aaKnown RBP1.74□□□□□ -2.13
UBP16YPL072W RPL26AP05743 127 aaKnown RBP1.74□□□□□ -2.13
UBP16YPL072W MGT1P26188 188 aa1.74□□□□□ -2.13
UBP16YPL072W RME1P32338 300 aaKnown RBP1.74□□□□□ -2.13
UBP16YPL072W MNN5P46982 586 aa1.74□□□□□ -2.13
UBP16YPL072W AIF1P52923 378 aa1.74□□□□□ -2.13
UBP16YPL072W RPL26BP53221 127 aaKnown RBP1.74□□□□□ -2.13
UBP16YPL072W YIP3P53633 176 aa1.74□□□□□ -2.13
UBP16YPL072W YNL184CP53876 108 aa1.74□□□□□ -2.13
UBP16YPL072W YLR460CP54007 376 aa1.74□□□□□ -2.13
UBP16YPL072W SUE1Q06524 206 aa1.74□□□□□ -2.13
UBP16YPL072W YLR031WQ07978 186 aa1.74□□□□□ -2.13
UBP16YPL072W RIO1Q12196 484 aaKnown RBP1.74□□□□□ -2.13
UBP16YPL072W PSF1Q12488 208 aa1.74□□□□□ -2.13
UBP16YPL072W YCF1P39109 1515 aaKnown RBP1.73□□□□□ -2.13
UBP16YPL072W REP2P03872 296 aa1.73□□□□□ -2.13
UBP16YPL072W QCR2P07257 368 aa1.73□□□□□ -2.13
UBP16YPL072W RPS24AP0CX31 135 aaKnown RBP1.73□□□□□ -2.13
UBP16YPL072W RPS24BP0CX32 135 aaKnown RBP1.73□□□□□ -2.13
UBP16YPL072W SEC14P24280 304 aaKnown RBP1.73□□□□□ -2.13
UBP16YPL072W UTP30P36144 274 aaKnown RBP1.73□□□□□ -2.13
UBP16YPL072W MED6P38782 295 aa1.73□□□□□ -2.13
UBP16YPL072W MRPL49P40858 161 aaPredicted RBP1.73□□□□□ -2.13
UBP16YPL072W TMA22P47089 198 aaPredicted RBP1.73□□□□□ -2.13
UBP16YPL072W YGR219WP53307 113 aa1.73□□□□□ -2.13
UBP16YPL072W ARO80Q04052 950 aa1.73□□□□□ -2.13
UBP16YPL072W RDS3Q06835 107 aaPredicted RBP1.73□□□□□ -2.13
UBP16YPL072W YPR014CQ6B0W2 109 aa1.73□□□□□ -2.13
UBP16YPL072W YFR032C-BQ8TGU2 87 aa1.73□□□□□ -2.13
UBP16YPL072W RPB3P16370 318 aaKnown RBP1.72□□□□□ -2.13
UBP16YPL072W GRX2P17695 143 aaKnown RBP1.72□□□□□ -2.13
UBP16YPL072W SEC17P32602 292 aa1.72□□□□□ -2.13
UBP16YPL072W PGD1P40356 397 aa1.72□□□□□ -2.13
UBP16YPL072W FMP32P43557 207 aa1.72□□□□□ -2.13
UBP16YPL072W CIS3P47001 227 aa1.72□□□□□ -2.13
UBP16YPL072W JAC1P53193 184 aa1.72□□□□□ -2.13
UBP16YPL072W SLM2P53955 656 aa1.72□□□□□ -2.13
UBP16YPL072W SWP1Q02795 286 aa1.72□□□□□ -2.13
UBP16YPL072W AIM34Q03673 198 aa1.72□□□□□ -2.13
UBP16YPL072W YDR249CQ03787 373 aa1.72□□□□□ -2.13
UBP16YPL072W PLP1Q04004 230 aa1.72□□□□□ -2.13
UBP16YPL072W TRM12Q04235 462 aa1.72□□□□□ -2.13
UBP16YPL072W HNT1Q04344 158 aaKnown RBP1.72□□□□□ -2.13
UBP16YPL072W ATO3Q12359 275 aa1.72□□□□□ -2.13
UBP16YPL072W SNT2P53127 1403 aa1.72□□□□□ -2.13
UBP16YPL072W VPS15P22219 1454 aa1.72□□□□□ -2.13
UBP16YPL072W CNB1P25296 175 aa1.71□□□□□ -2.14
UBP16YPL072W YCR090CP25654 182 aaKnown RBP1.71□□□□□ -2.14
UBP16YPL072W SNC2P33328 115 aa1.71□□□□□ -2.14
UBP16YPL072W KDX1P36005 433 aa1.71□□□□□ -2.14
UBP16YPL072W LSM4P40070 187 aaKnown RBP1.71□□□□□ -2.14
UBP16YPL072W CAB4P53332 305 aa1.71□□□□□ -2.14
UBP16YPL072W NEJ1Q06148 342 aa1.71□□□□□ -2.14
UBP16YPL072W DGA1Q08650 418 aa1.71□□□□□ -2.14
UBP16YPL072W MCP1Q12106 302 aa1.71□□□□□ -2.14
UBP16YPL072W PEX11Q12462 236 aa1.71□□□□□ -2.14
UBP16YPL072W TIM9O74700 87 aa1.71□□□□□ -2.14
UBP16YPL072W FES1P38260 290 aa1.71□□□□□ -2.14
UBP16YPL072W CTR2P38865 189 aa1.71□□□□□ -2.14
UBP16YPL072W AVT2P39981 480 aa1.71□□□□□ -2.14
UBP16YPL072W YER076CP40049 302 aa1.71□□□□□ -2.14
UBP16YPL072W SMD3P43321 101 aaKnown RBP1.71□□□□□ -2.14
UBP16YPL072W ARP3P47117 449 aaKnown RBP1.71□□□□□ -2.14
UBP16YPL072W UBC12P52491 188 aa1.71□□□□□ -2.14
UBP16YPL072W ARO8P53090 500 aaKnown RBP1.71□□□□□ -2.14
UBP16YPL072W RRP17Q04031 235 aaPredicted RBP1.71□□□□□ -2.14
UBP16YPL072W PDR15Q04182 1529 aaKnown RBP1.71□□□□□ -2.14
UBP16YPL072W SHH4Q06236 168 aa1.71□□□□□ -2.14
UBP16YPL072W ARR2Q06597 130 aa1.71□□□□□ -2.14
UBP16YPL072W BRX1Q08235 291 aaKnown RBP1.71□□□□□ -2.14
UBP16YPL072W SRB8P25648 1427 aa1.7□□□□□ -2.14
UBP16YPL072W CAT8P39113 1433 aa1.7□□□□□ -2.14
UBP16YPL072W SCO1P23833 295 aa1.7□□□□□ -2.14
UBP16YPL072W MDH3P32419 343 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
UBP16YPL072W CLB6P32943 380 aa1.7□□□□□ -2.14
UBP16YPL072W MRPL17P36528 281 aa1.7□□□□□ -2.14
UBP16YPL072W GVP36P40531 326 aaKnown RBP1.7□□□□□ -2.14
UBP16YPL072W COS6P53344 381 aa1.7□□□□□ -2.14
UBP16YPL072W YNL140CP53910 189 aa1.7□□□□□ -2.14
UBP16YPL072W MIX17Q03667 156 aa1.7□□□□□ -2.14
UBP16YPL072W YOR283WQ12040 230 aaKnown RBP1.7□□□□□ -2.14
UBP16YPL072W YLR050CQ12155 161 aaKnown RBP1.7□□□□□ -2.14
UBP16YPL072W EMC6Q12431 108 aa1.7□□□□□ -2.14
UBP16YPL072W VTH1P40438 1549 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms