RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W ARR2Q06597 130 aa2.61□□□□□ -1.99
HSH49YOR319W YFR032C-BQ8TGU2 87 aa2.61□□□□□ -1.99
HSH49YOR319W PET9P18239 318 aaKnown RBP2.6□□□□□ -1.99
HSH49YOR319W CKS1P20486 150 aaKnown RBP2.6□□□□□ -1.99
HSH49YOR319W CLG1P35190 452 aa2.6□□□□□ -1.99
HSH49YOR319W FMP32P43557 207 aa2.6□□□□□ -1.99
HSH49YOR319W SKI6P46948 246 aaPredicted RBP2.6□□□□□ -1.99
HSH49YOR319W DSK2P48510 373 aa2.6□□□□□ -1.99
HSH49YOR319W YMR315WQ04869 349 aaKnown RBP2.6□□□□□ -1.99
HSH49YOR319W MHT1Q12525 324 aa2.6□□□□□ -1.99
HSH49YOR319W PRM10P42946 383 aa2.59□□□□□ -1.99
HSH49YOR319W ARP3P47117 449 aaKnown RBP2.59□□□□□ -1.99
HSH49YOR319W YJR146WP47174 117 aa2.59□□□□□ -1.99
HSH49YOR319W NEJ1Q06148 342 aa2.59□□□□□ -1.99
HSH49YOR319W YLR031WQ07978 186 aa2.59□□□□□ -1.99
HSH49YOR319W YOR283WQ12040 230 aaKnown RBP2.59□□□□□ -1.99
HSH49YOR319W YLR050CQ12155 161 aaKnown RBP2.59□□□□□ -1.99
HSH49YOR319W MEI4P29467 408 aa2.58□□□□□ -2
HSH49YOR319W ARO7P32178 256 aa2.58□□□□□ -2
HSH49YOR319W YKR041WP36134 250 aa2.58□□□□□ -2
HSH49YOR319W MRPL17P36528 281 aa2.58□□□□□ -2
HSH49YOR319W FMP23P38231 175 aa2.58□□□□□ -2
HSH49YOR319W YHR180WP38868 163 aa2.58□□□□□ -2
HSH49YOR319W YER076CP40049 302 aa2.58□□□□□ -2
HSH49YOR319W LSM4P40070 187 aaKnown RBP2.58□□□□□ -2
HSH49YOR319W YER121WP40076 114 aa2.58□□□□□ -2
HSH49YOR319W ICE2P40499 491 aa2.58□□□□□ -2
HSH49YOR319W ARO8P53090 500 aaKnown RBP2.58□□□□□ -2
HSH49YOR319W SLM2P53955 656 aa2.58□□□□□ -2
HSH49YOR319W HNT1Q04344 158 aaKnown RBP2.58□□□□□ -2
HSH49YOR319W VPS68Q12016 184 aa2.58□□□□□ -2
HSH49YOR319W QCR2P07257 368 aa2.57□□□□□ -2
HSH49YOR319W MRPS28P21771 286 aa2.57□□□□□ -2
HSH49YOR319W OCH1P31755 480 aa2.57□□□□□ -2
HSH49YOR319W CLB6P32943 380 aa2.57□□□□□ -2
HSH49YOR319W NVJ1P38881 321 aa2.57□□□□□ -2
HSH49YOR319W PGD1P40356 397 aa2.57□□□□□ -2
HSH49YOR319W COS6P53344 381 aa2.57□□□□□ -2
HSH49YOR319W HPT1Q04178 221 aaKnown RBP2.57□□□□□ -2
HSH49YOR319W SUE1Q06524 206 aa2.57□□□□□ -2
HSH49YOR319W BRX1Q08235 291 aaKnown RBP2.57□□□□□ -2
HSH49YOR319W TIM9O74700 87 aa2.56□□□□□ -2
HSH49YOR319W RPS24AP0CX31 135 aaKnown RBP2.56□□□□□ -2
HSH49YOR319W RPS24BP0CX32 135 aaKnown RBP2.56□□□□□ -2
HSH49YOR319W ATP15P21306 62 aa2.56□□□□□ -2
HSH49YOR319W SEC14P24280 304 aaKnown RBP2.56□□□□□ -2
HSH49YOR319W AHC2P25649 128 aa2.56□□□□□ -2
HSH49YOR319W YCR090CP25654 182 aaKnown RBP2.56□□□□□ -2
HSH49YOR319W MDH3P32419 343 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
HSH49YOR319W AIM2P39721 246 aa2.56□□□□□ -2
HSH49YOR319W TMA22P47089 198 aaPredicted RBP2.56□□□□□ -2
HSH49YOR319W YGR219WP53307 113 aa2.56□□□□□ -2
HSH49YOR319W AIM34Q03673 198 aa2.56□□□□□ -2
HSH49YOR319W SPG3Q04398 127 aaPredicted RBP2.56□□□□□ -2
HSH49YOR319W RDS3Q06835 107 aaPredicted RBP2.56□□□□□ -2
HSH49YOR319W YPR014CQ6B0W2 109 aa2.56□□□□□ -2
HSH49YOR319W UMP1P38293 148 aa2.55□□□□□ -2
HSH49YOR319W AME1P38313 324 aa2.55□□□□□ -2
HSH49YOR319W GVP36P40531 326 aaKnown RBP2.55□□□□□ -2
HSH49YOR319W YKE4P40544 346 aa2.55□□□□□ -2
HSH49YOR319W NUP49Q02199 472 aa2.55□□□□□ -2
HSH49YOR319W SHH4Q06236 168 aa2.55□□□□□ -2
HSH49YOR319W HRT1Q08273 121 aa2.55□□□□□ -2
HSH49YOR319W DGA1Q08650 418 aa2.55□□□□□ -2
HSH49YOR319W EMC6Q12431 108 aa2.55□□□□□ -2
HSH49YOR319W UBC6P33296 250 aaPredicted RBP2.54□□□□□ -2
HSH49YOR319W SNC2P33328 115 aa2.54□□□□□ -2
HSH49YOR319W OPY1P38271 328 aa2.54□□□□□ -2
HSH49YOR319W YJR111CP47148 283 aaKnown RBP2.54□□□□□ -2
HSH49YOR319W PGA1P53896 198 aa2.54□□□□□ -2
HSH49YOR319W DAD3P69850 94 aa2.54□□□□□ -2
HSH49YOR319W DYN3Q04949 312 aa2.54□□□□□ -2
HSH49YOR319W ATO3Q12359 275 aa2.54□□□□□ -2
HSH49YOR319W PEX11Q12462 236 aa2.54□□□□□ -2
HSH49YOR319W PEX4P29340 183 aa2.53□□□□□ -2
HSH49YOR319W YOR062CP36025 268 aa2.53□□□□□ -2
HSH49YOR319W YBR285WP38354 144 aa2.53□□□□□ -2
HSH49YOR319W MTW1P39731 289 aa2.53□□□□□ -2
HSH49YOR319W RPL33BP41056 107 aaKnown RBP2.53□□□□□ -2
HSH49YOR319W SER2P42941 309 aa2.53□□□□□ -2
HSH49YOR319W CIS3P47001 227 aa2.53□□□□□ -2
HSH49YOR319W TDA4P47153 279 aa2.53□□□□□ -2
HSH49YOR319W DOC1P53068 250 aa2.53□□□□□ -2
HSH49YOR319W PLP1Q04004 230 aa2.53□□□□□ -2
HSH49YOR319W GPI17Q04080 534 aa2.53□□□□□ -2
HSH49YOR319W MPD1Q12404 318 aaKnown RBP2.53□□□□□ -2
HSH49YOR319W ODC2Q99297 307 aa2.53□□□□□ -2
HSH49YOR319W CMD1P06787 147 aaKnown RBP2.52□□□□□ -2.01
HSH49YOR319W CPA1P07258 411 aaKnown RBP2.52□□□□□ -2.01
HSH49YOR319W PAN3P36102 679 aaPredicted RBP2.52□□□□□ -2.01
HSH49YOR319W TVP38P36164 337 aa2.52□□□□□ -2.01
HSH49YOR319W AVT2P39981 480 aa2.52□□□□□ -2.01
HSH49YOR319W YER134CP40081 178 aa2.52□□□□□ -2.01
HSH49YOR319W MIX17Q03667 156 aa2.52□□□□□ -2.01
HSH49YOR319W MRPS8Q03799 155 aa2.52□□□□□ -2.01
HSH49YOR319W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
HSH49YOR319W YKL102CP34249 101 aa2.51□□□□□ -2.01
HSH49YOR319W YEA4P40004 342 aa2.51□□□□□ -2.01
HSH49YOR319W YDR274CP87283 123 aa2.51□□□□□ -2.01
HSH49YOR319W YLR053CQ12026 108 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms