RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C VPS71Q03433 280 aa2.69□□□□□ -1.98
LCB4YOR171C TVP18Q04767 167 aa2.69□□□□□ -1.98
LCB4YOR171C SML1Q04964 104 aa2.69□□□□□ -1.98
LCB4YOR171C MPD1Q12404 318 aaKnown RBP2.69□□□□□ -1.98
LCB4YOR171C OCA6Q12454 224 aa2.69□□□□□ -1.98
LCB4YOR171C YGL194C-AQ2V2P6 80 aa2.69□□□□□ -1.98
LCB4YOR171C YNL277W-AQ3E7Z0 62 aa2.69□□□□□ -1.98
LCB4YOR171C YCR075W-AQ3E830 75 aa2.69□□□□□ -1.98
LCB4YOR171C YHR214C-EQ8TGK0 99 aa2.69□□□□□ -1.98
LCB4YOR171C TIP1P27654 210 aaPredicted RBP2.68□□□□□ -1.98
LCB4YOR171C ETR1P38071 380 aa2.68□□□□□ -1.98
LCB4YOR171C POP8P38208 133 aa2.68□□□□□ -1.98
LCB4YOR171C DLS1P40366 167 aa2.68□□□□□ -1.98
LCB4YOR171C SFT1P43682 97 aa2.68□□□□□ -1.98
LCB4YOR171C DIE2P50076 525 aa2.68□□□□□ -1.98
LCB4YOR171C YGL034CP53186 121 aa2.68□□□□□ -1.98
LCB4YOR171C YNL046WP53956 172 aa2.68□□□□□ -1.98
LCB4YOR171C CRZ1P53968 678 aa2.68□□□□□ -1.98
LCB4YOR171C THI74Q04083 370 aa2.68□□□□□ -1.98
LCB4YOR171C MRX8Q05473 314 aa2.68□□□□□ -1.98
LCB4YOR171C MSA1Q08471 629 aa2.68□□□□□ -1.98
LCB4YOR171C GTT2Q12390 233 aa2.68□□□□□ -1.98
LCB4YOR171C MRS3P10566 314 aa2.67□□□□□ -1.98
LCB4YOR171C SHB17P36136 271 aaKnown RBP2.67□□□□□ -1.98
LCB4YOR171C CSH1P38287 376 aa2.67□□□□□ -1.98
LCB4YOR171C YHL049CP38722 271 aa2.67□□□□□ -1.98
LCB4YOR171C PRE5P40302 234 aaKnown RBP2.67□□□□□ -1.98
LCB4YOR171C SNM1P40993 198 aa2.67□□□□□ -1.98
LCB4YOR171C MDM34P53083 459 aa2.67□□□□□ -1.98
LCB4YOR171C RNH201P53942 307 aa2.67□□□□□ -1.98
LCB4YOR171C VPS28Q02767 242 aa2.67□□□□□ -1.98
LCB4YOR171C GOT1Q03554 138 aa2.67□□□□□ -1.98
LCB4YOR171C YML018CQ03730 393 aa2.67□□□□□ -1.98
LCB4YOR171C YOR186WQ08560 144 aa2.67□□□□□ -1.98
LCB4YOR171C SLM3Q12093 417 aa2.67□□□□□ -1.98
LCB4YOR171C BOL1Q3E793 110 aa2.67□□□□□ -1.98
LCB4YOR171C MHP1P43638 1398 aa2.67□□□□□ -1.98
LCB4YOR171C YCR100CP25606 316 aa2.67□□□□□ -1.98
LCB4YOR171C ATS1P31386 333 aa2.67□□□□□ -1.98
LCB4YOR171C PTM1P32857 523 aa2.67□□□□□ -1.98
LCB4YOR171C YNK1P36010 153 aaKnown RBP2.67□□□□□ -1.98
LCB4YOR171C FMP46P36141 133 aaKnown RBP2.67□□□□□ -1.98
LCB4YOR171C YBR090CP38253 122 aa2.67□□□□□ -1.98
LCB4YOR171C NSE4P43124 402 aa2.67□□□□□ -1.98
LCB4YOR171C RRT5P43607 289 aa2.67□□□□□ -1.98
LCB4YOR171C YGL230CP53074 147 aa2.67□□□□□ -1.98
LCB4YOR171C YGR018CP53211 109 aa2.67□□□□□ -1.98
LCB4YOR171C PGA1P53896 198 aa2.67□□□□□ -1.98
LCB4YOR171C APJ1P53940 528 aa2.67□□□□□ -1.98
LCB4YOR171C YCL001W-AP87012 153 aa2.67□□□□□ -1.98
LCB4YOR171C COA4Q05809 96 aa2.67□□□□□ -1.98
LCB4YOR171C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
LCB4YOR171C SPC3Q12133 184 aa2.67□□□□□ -1.98
LCB4YOR171C YDL180WQ12301 547 aa2.67□□□□□ -1.98
LCB4YOR171C KTI11Q3E840 82 aa2.67□□□□□ -1.98
LCB4YOR171C YHR139C-AO13536 103 aa2.66□□□□□ -1.98
LCB4YOR171C MBF1O14467 151 aaKnown RBP2.66□□□□□ -1.98
LCB4YOR171C REP2P03872 296 aa2.66□□□□□ -1.98
LCB4YOR171C YAR066WP0CX18 203 aa2.66□□□□□ -1.98
LCB4YOR171C YHR214WP0CX19 203 aa2.66□□□□□ -1.98
LCB4YOR171C TIR1P10863 254 aa2.66□□□□□ -1.98
LCB4YOR171C CPR1P14832 162 aaKnown RBP2.66□□□□□ -1.98
LCB4YOR171C ANB1P19211 157 aa2.66□□□□□ -1.98
LCB4YOR171C AVT5P38176 459 aa2.66□□□□□ -1.98
LCB4YOR171C PAN6P40459 309 aa2.66□□□□□ -1.98
LCB4YOR171C OST1P41543 476 aaKnown RBP2.66□□□□□ -1.98
LCB4YOR171C DIM1P41819 318 aaKnown RBP2.66□□□□□ -1.98
LCB4YOR171C YGL082WP53155 381 aa2.66□□□□□ -1.98
LCB4YOR171C MRH4P53166 561 aa2.66□□□□□ -1.98
LCB4YOR171C YMR099CQ03161 297 aaKnown RBP2.66□□□□□ -1.98
LCB4YOR171C RNH202Q05635 350 aa2.66□□□□□ -1.98
LCB4YOR171C HRI1Q05905 244 aaKnown RBP2.66□□□□□ -1.98
LCB4YOR171C YLR042CQ07990 161 aa2.66□□□□□ -1.98
LCB4YOR171C YPS3Q12303 508 aa2.66□□□□□ -1.98
LCB4YOR171C EAF3Q12432 401 aa2.66□□□□□ -1.98
LCB4YOR171C YLR412C-AQ3E742 68 aa2.66□□□□□ -1.98
LCB4YOR171C YIL177CP40434 1758 aa2.66□□□□□ -1.98
LCB4YOR171C YJL225CP40889 1758 aa2.66□□□□□ -1.98
LCB4YOR171C KRE5P22023 1365 aa2.65□□□□□ -1.98
LCB4YOR171C CKS1P20486 150 aaKnown RBP2.65□□□□□ -1.98
LCB4YOR171C YCR022CP25620 114 aa2.65□□□□□ -1.98
LCB4YOR171C ATG15P25641 520 aa2.65□□□□□ -1.98
LCB4YOR171C SRP21P32342 167 aa2.65□□□□□ -1.98
LCB4YOR171C SPT14P32363 452 aa2.65□□□□□ -1.98
LCB4YOR171C YBL081WP38180 368 aaKnown RBP2.65□□□□□ -1.98
LCB4YOR171C YEL075CP39972 122 aa2.65□□□□□ -1.98
LCB4YOR171C SNU13P39990 126 aaKnown RBP2.65□□□□□ -1.98
LCB4YOR171C YER189WP40104 122 aa2.65□□□□□ -1.98
LCB4YOR171C FIP1P45976 327 aa2.65□□□□□ -1.98
LCB4YOR171C ARP3P47117 449 aaKnown RBP2.65□□□□□ -1.98
LCB4YOR171C SBH1P52870 82 aa2.65□□□□□ -1.98
LCB4YOR171C YGR050CP53231 118 aa2.65□□□□□ -1.98
LCB4YOR171C NRM1P53718 249 aa2.65□□□□□ -1.98
LCB4YOR171C YNL033WP53964 284 aa2.65□□□□□ -1.98
LCB4YOR171C YNL019CP53975 284 aa2.65□□□□□ -1.98
LCB4YOR171C ELC1Q03071 99 aa2.65□□□□□ -1.98
LCB4YOR171C NAT3Q06504 195 aa2.65□□□□□ -1.98
LCB4YOR171C TIM18Q08749 192 aa2.65□□□□□ -1.98
LCB4YOR171C DGK1Q12382 290 aa2.65□□□□□ -1.98
LCB4YOR171C TSC3Q3E790 80 aa2.65□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms