RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C PAU9Q3E770 120 aa6.44□□□□□ -1.38
RUP1YOR138C RPS16AP0CX51 143 aaKnown RBP6.43□□□□□ -1.38
RUP1YOR138C RPS16BP0CX52 143 aaKnown RBP6.43□□□□□ -1.38
RUP1YOR138C PDX1P16451 410 aa6.43□□□□□ -1.38
RUP1YOR138C SEC62P21825 274 aa6.43□□□□□ -1.38
RUP1YOR138C MDH2P22133 377 aa6.43□□□□□ -1.38
RUP1YOR138C ERV1P27882 189 aa6.43□□□□□ -1.38
RUP1YOR138C PEX4P29340 183 aa6.43□□□□□ -1.38
RUP1YOR138C CYT2Q00873 224 aa6.43□□□□□ -1.38
RUP1YOR138C CUE4Q04201 117 aaPredicted RBP6.43□□□□□ -1.38
RUP1YOR138C YFH1Q07540 174 aa6.43□□□□□ -1.38
RUP1YOR138C THI72Q08579 599 aa6.43□□□□□ -1.38
RUP1YOR138C ALG6Q12001 544 aaKnown RBP6.43□□□□□ -1.38
RUP1YOR138C DAP1Q12091 152 aa6.43□□□□□ -1.38
RUP1YOR138C YPR108W-AQ3E7B3 70 aa6.43□□□□□ -1.38
RUP1YOR138C MAK32P23060 363 aa6.43□□□□□ -1.38
RUP1YOR138C PGU1P47180 361 aa6.43□□□□□ -1.38
RUP1YOR138C PDR17P53844 350 aa6.43□□□□□ -1.38
RUP1YOR138C CGI121Q03705 181 aaKnown RBP6.43□□□□□ -1.38
RUP1YOR138C PAM18Q07914 168 aa6.43□□□□□ -1.38
RUP1YOR138C USB1Q12208 290 aaKnown RBP6.43□□□□□ -1.38
RUP1YOR138C YIL134C-AQ45U18 67 aa6.43□□□□□ -1.38
RUP1YOR138C BEM2P39960 2167 aaKnown RBP6.43□□□□□ -1.38
RUP1YOR138C POL2P21951 2222 aaKnown RBP6.42□□□□□ -1.38
RUP1YOR138C SWD3P38123 315 aa6.42□□□□□ -1.38
RUP1YOR138C SDC1Q03323 175 aa6.42□□□□□ -1.38
RUP1YOR138C YOL029CQ08187 201 aa6.42□□□□□ -1.38
RUP1YOR138C FRE8Q12209 686 aa6.42□□□□□ -1.38
RUP1YOR138C RAX2Q12465 1220 aa6.42□□□□□ -1.38
RUP1YOR138C TMA17Q12513 150 aa6.42□□□□□ -1.38
RUP1YOR138C YOR192C-CQ3E736 78 aa6.42□□□□□ -1.38
RUP1YOR138C YDR034W-BQ6Q5X2 51 aa6.42□□□□□ -1.38
RUP1YOR138C BGL2P15703 313 aaKnown RBP6.42□□□□□ -1.38
RUP1YOR138C MRPL44P19956 98 aa6.42□□□□□ -1.38
RUP1YOR138C AHT1P29589 182 aa6.42□□□□□ -1.38
RUP1YOR138C MRPL11P36521 249 aaPredicted RBP6.42□□□□□ -1.38
RUP1YOR138C PAU5P43575 122 aa6.42□□□□□ -1.38
RUP1YOR138C HNT2P49775 206 aa6.42□□□□□ -1.38
RUP1YOR138C HHT1P61830 136 aa6.42□□□□□ -1.38
RUP1YOR138C TRS23Q03784 219 aa6.42□□□□□ -1.38
RUP1YOR138C YOL118CQ08259 102 aa6.42□□□□□ -1.38
RUP1YOR138C SWT1Q12104 458 aa6.42□□□□□ -1.38
RUP1YOR138C LAS17Q12446 633 aa6.42□□□□□ -1.38
RUP1YOR138C YIL046W-AQ3E7Z4 54 aa6.42□□□□□ -1.38
RUP1YOR138C PAU19P0CE85 124 aa6.41□□□□□ -1.38
RUP1YOR138C PAU21P0CE86 164 aa6.41□□□□□ -1.38
RUP1YOR138C PAU22P0CE87 164 aa6.41□□□□□ -1.38
RUP1YOR138C FUN14P18411 198 aa6.41□□□□□ -1.38
RUP1YOR138C PAU3P25610 124 aa6.41□□□□□ -1.38
RUP1YOR138C SUR2P38992 349 aa6.41□□□□□ -1.38
RUP1YOR138C YER079WP40052 210 aaKnown RBP6.41□□□□□ -1.38
RUP1YOR138C FRQ1Q06389 190 aa6.41□□□□□ -1.38
RUP1YOR138C YOR376WQ08900 122 aa6.41□□□□□ -1.38
RUP1YOR138C CDC39P25655 2108 aaKnown RBP6.41□□□□□ -1.38
RUP1YOR138C CDC26P14724 124 aa6.4□□□□□ -1.38
RUP1YOR138C COQ3P27680 312 aa6.4□□□□□ -1.38
RUP1YOR138C HIT1P46973 164 aa6.4□□□□□ -1.38
RUP1YOR138C ATG21Q02887 496 aa6.4□□□□□ -1.38
RUP1YOR138C YDR387CQ04162 555 aa6.4□□□□□ -1.38
RUP1YOR138C DAL4Q04895 635 aa6.4□□□□□ -1.38
RUP1YOR138C YLR179CQ06252 201 aaKnown RBP6.4□□□□□ -1.38
RUP1YOR138C ARR2Q06597 130 aa6.4□□□□□ -1.38
RUP1YOR138C YPL264CQ08980 353 aa6.4□□□□□ -1.38
RUP1YOR138C NCE102Q12207 173 aaRIP-Chip data6.4□□□□□ -1.38not detected
RUP1YOR138C ERV2Q12284 196 aa6.4□□□□□ -1.38
RUP1YOR138C ERG27Q12452 347 aaKnown RBP6.4□□□□□ -1.38
RUP1YOR138C SEC16P48415 2195 aaKnown RBP6.4□□□□□ -1.38
RUP1YOR138C DEG1P31115 442 aaKnown RBP6.4□□□□□ -1.39
RUP1YOR138C HSP10P38910 106 aa6.4□□□□□ -1.39
RUP1YOR138C PCL7P40186 285 aa6.4□□□□□ -1.39
RUP1YOR138C YGR149WP48236 432 aa6.4□□□□□ -1.39
RUP1YOR138C GEP7P53171 287 aa6.4□□□□□ -1.39
RUP1YOR138C DAD3P69850 94 aa6.4□□□□□ -1.39
RUP1YOR138C DPB4Q04603 196 aaKnown RBP6.4□□□□□ -1.39
RUP1YOR138C YOR352WQ08816 343 aa6.4□□□□□ -1.39
RUP1YOR138C ISU2Q12056 156 aa6.4□□□□□ -1.39
RUP1YOR138C YBR255C-AQ3E776 120 aa6.4□□□□□ -1.39
RUP1YOR138C YNR034W-AQ3E841 98 aa6.4□□□□□ -1.39
RUP1YOR138C NHP6AP11632 93 aaKnown RBP6.39□□□□□ -1.39
RUP1YOR138C MCH2P36032 473 aa6.39□□□□□ -1.39
RUP1YOR138C IRC22P40006 225 aa6.39□□□□□ -1.39
RUP1YOR138C NSA2P40078 261 aaKnown RBP6.39□□□□□ -1.39
RUP1YOR138C PIG2P40187 538 aa6.39□□□□□ -1.39
RUP1YOR138C ATG27P46989 271 aa6.39□□□□□ -1.39
RUP1YOR138C TTI2P47168 421 aa6.39□□□□□ -1.39
RUP1YOR138C HCH1P53834 153 aa6.39□□□□□ -1.39
RUP1YOR138C YNL165WP53891 406 aa6.39□□□□□ -1.39
RUP1YOR138C HED1Q03937 162 aa6.39□□□□□ -1.39
RUP1YOR138C RFU1Q08003 200 aa6.39□□□□□ -1.39
RUP1YOR138C ATG40Q99325 256 aa6.39□□□□□ -1.39
RUP1YOR138C MSI1P13712 422 aa6.38□□□□□ -1.39
RUP1YOR138C SAG1P20840 650 aa6.38□□□□□ -1.39
RUP1YOR138C ATG15P25641 520 aa6.38□□□□□ -1.39
RUP1YOR138C SHB17P36136 271 aaKnown RBP6.38□□□□□ -1.39
RUP1YOR138C YIL169CP40442 995 aa6.38□□□□□ -1.39
RUP1YOR138C TAF4P50105 388 aa6.38□□□□□ -1.39
RUP1YOR138C TNA1P53322 534 aa6.38□□□□□ -1.39
RUP1YOR138C ERF2Q06551 359 aa6.38□□□□□ -1.39
RUP1YOR138C MHR1Q06630 226 aa6.38□□□□□ -1.39
RUP1YOR138C YBL029C-AQ3E756 94 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms