RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W MCP1Q12106 302 aa2.3□□□□□ -2.04
TRM112YNR046W RIO1Q12196 484 aaKnown RBP2.3□□□□□ -2.04
TRM112YNR046W MRS1P07266 363 aa2.29□□□□□ -2.04
TRM112YNR046W FBA1P14540 359 aaKnown RBP2.29□□□□□ -2.04
TRM112YNR046W PEX4P29340 183 aa2.29□□□□□ -2.04
TRM112YNR046W MEI4P29467 408 aa2.29□□□□□ -2.04
TRM112YNR046W YHR180WP38868 163 aa2.29□□□□□ -2.04
TRM112YNR046W ICE2P40499 491 aa2.29□□□□□ -2.04
TRM112YNR046W PRM10P42946 383 aa2.29□□□□□ -2.04
TRM112YNR046W YDR249CQ03787 373 aa2.29□□□□□ -2.04
TRM112YNR046W YET3Q07451 203 aa2.29□□□□□ -2.04
TRM112YNR046W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
TRM112YNR046W USB1Q12208 290 aaKnown RBP2.29□□□□□ -2.04
TRM112YNR046W YFR032C-BQ8TGU2 87 aa2.29□□□□□ -2.04
TRM112YNR046W TIM9O74700 87 aa2.28□□□□□ -2.04
TRM112YNR046W RPB3P16370 318 aaKnown RBP2.28□□□□□ -2.04
TRM112YNR046W CKS1P20486 150 aaKnown RBP2.28□□□□□ -2.04
TRM112YNR046W SNC2P33328 115 aa2.28□□□□□ -2.04
TRM112YNR046W MRPL17P36528 281 aa2.28□□□□□ -2.04
TRM112YNR046W FES1P38260 290 aa2.28□□□□□ -2.04
TRM112YNR046W PHO88P38264 188 aaPredicted RBP2.28□□□□□ -2.04
TRM112YNR046W UMP1P38293 148 aa2.28□□□□□ -2.04
TRM112YNR046W GLE2P40066 365 aa2.28□□□□□ -2.04
TRM112YNR046W RPL33BP41056 107 aaKnown RBP2.28□□□□□ -2.04
TRM112YNR046W ERG25P53045 309 aa2.28□□□□□ -2.04
TRM112YNR046W SCL1P21243 252 aaKnown RBP2.27□□□□□ -2.05
TRM112YNR046W PDS1P40316 373 aaPredicted RBP2.27□□□□□ -2.05
TRM112YNR046W AGE2P40529 298 aa2.27□□□□□ -2.05
TRM112YNR046W GVP36P40531 326 aaKnown RBP2.27□□□□□ -2.05
TRM112YNR046W LSM1P47017 172 aaKnown RBP2.27□□□□□ -2.05
TRM112YNR046W YNR062CP53748 327 aa2.27□□□□□ -2.05
TRM112YNR046W GRE1Q08969 168 aa2.27□□□□□ -2.05
TRM112YNR046W IGO2Q9P305 131 aa2.27□□□□□ -2.05
TRM112YNR046W CNB1P25296 175 aa2.26□□□□□ -2.05
TRM112YNR046W TAH1P25638 111 aaPredicted RBP2.26□□□□□ -2.05
TRM112YNR046W NUF2P33895 451 aa2.26□□□□□ -2.05
TRM112YNR046W YET1P35723 206 aa2.26□□□□□ -2.05
TRM112YNR046W FIG1P38224 298 aa2.26□□□□□ -2.05
TRM112YNR046W AME1P38313 324 aa2.26□□□□□ -2.05
TRM112YNR046W AIM2P39721 246 aa2.26□□□□□ -2.05
TRM112YNR046W YER121WP40076 114 aa2.26□□□□□ -2.05
TRM112YNR046W POG1P40473 351 aa2.26□□□□□ -2.05
TRM112YNR046W TIR3P40552 269 aa2.26□□□□□ -2.05
TRM112YNR046W DAN1P47178 298 aa2.26□□□□□ -2.05
TRM112YNR046W YIP3P53633 176 aa2.26□□□□□ -2.05
TRM112YNR046W HNT1Q04344 158 aaKnown RBP2.26□□□□□ -2.05
TRM112YNR046W SPG3Q04398 127 aaPredicted RBP2.26□□□□□ -2.05
TRM112YNR046W YLR036CQ07986 203 aa2.26□□□□□ -2.05
TRM112YNR046W YDL085C-AQ3E7B7 68 aaKnown RBP2.26□□□□□ -2.05
TRM112YNR046W MBF1O14467 151 aaKnown RBP2.25□□□□□ -2.05
TRM112YNR046W SNF4P12904 322 aa2.25□□□□□ -2.05
TRM112YNR046W PET9P18239 318 aaKnown RBP2.25□□□□□ -2.05
TRM112YNR046W GIM4P40005 111 aaKnown RBP2.25□□□□□ -2.05
TRM112YNR046W YDC1Q02896 317 aa2.25□□□□□ -2.05
TRM112YNR046W NOC4Q06512 552 aaPredicted RBP2.25□□□□□ -2.05
TRM112YNR046W YOL024WQ08172 172 aa2.25□□□□□ -2.05
TRM112YNR046W QCR2P07257 368 aa2.24□□□□□ -2.05
TRM112YNR046W RPS24AP0CX31 135 aaKnown RBP2.24□□□□□ -2.05
TRM112YNR046W RPS24BP0CX32 135 aaKnown RBP2.24□□□□□ -2.05
TRM112YNR046W TRX3P25372 127 aa2.24□□□□□ -2.05
TRM112YNR046W YCR090CP25654 182 aaKnown RBP2.24□□□□□ -2.05
TRM112YNR046W SRP102P36057 244 aaPredicted RBP2.24□□□□□ -2.05
TRM112YNR046W NRG2P38082 220 aa2.24□□□□□ -2.05
TRM112YNR046W YHR022CP38763 256 aa2.24□□□□□ -2.05
TRM112YNR046W SVP26P38869 228 aa2.24□□□□□ -2.05
TRM112YNR046W SOK1P40317 901 aa2.24□□□□□ -2.05
TRM112YNR046W VMA10P48836 114 aaKnown RBP2.24□□□□□ -2.05
TRM112YNR046W DOC1P53068 250 aa2.24□□□□□ -2.05
TRM112YNR046W YNL184CP53876 108 aa2.24□□□□□ -2.05
TRM112YNR046W YNL140CP53910 189 aa2.24□□□□□ -2.05
TRM112YNR046W ARO80Q04052 950 aa2.24□□□□□ -2.05
TRM112YNR046W BOL1Q3E793 110 aa2.24□□□□□ -2.05
TRM112YNR046W ATP15P21306 62 aa2.23□□□□□ -2.05
TRM112YNR046W YBR285WP38354 144 aa2.23□□□□□ -2.05
TRM112YNR046W NRK1P53915 240 aa2.23□□□□□ -2.05
TRM112YNR046W YDR274CP87283 123 aa2.23□□□□□ -2.05
TRM112YNR046W CYT2Q00873 224 aa2.23□□□□□ -2.05
TRM112YNR046W SPC24Q04477 213 aa2.23□□□□□ -2.05
TRM112YNR046W GRX8Q05926 109 aa2.23□□□□□ -2.05
TRM112YNR046W YLR031WQ07978 186 aa2.23□□□□□ -2.05
TRM112YNR046W SKI3P17883 1432 aaKnown RBP2.23□□□□□ -2.05
TRM112YNR046W ECM5Q03214 1411 aa2.23□□□□□ -2.05
TRM112YNR046W VMA22P38784 181 aa2.22□□□□□ -2.05
TRM112YNR046W SRP14P38985 146 aa2.22□□□□□ -2.05
TRM112YNR046W YNL217WP40152 326 aa2.22□□□□□ -2.05
TRM112YNR046W YJL027CP47063 138 aaPredicted RBP2.22□□□□□ -2.05
TRM112YNR046W EAF6P47128 113 aa2.22□□□□□ -2.05
TRM112YNR046W YGR042WP53227 271 aa2.22□□□□□ -2.05
TRM112YNR046W SNO1Q03144 224 aa2.22□□□□□ -2.05
TRM112YNR046W FSF1Q12029 327 aaKnown RBP2.22□□□□□ -2.05
TRM112YNR046W DER1P38307 211 aa2.21□□□□□ -2.06
TRM112YNR046W DSE2P38844 325 aa2.21□□□□□ -2.06
TRM112YNR046W VTC1P40046 129 aaRIP-Chip data2.21□□□□□ -2.06not detected
TRM112YNR046W ARP3P47117 449 aaKnown RBP2.21□□□□□ -2.06
TRM112YNR046W UBC12P52491 188 aa2.21□□□□□ -2.06
TRM112YNR046W IGO1P53897 168 aa2.21□□□□□ -2.06
TRM112YNR046W YLR460CP54007 376 aa2.21□□□□□ -2.06
TRM112YNR046W DGA1Q08650 418 aa2.21□□□□□ -2.06
TRM112YNR046W PET20Q99373 253 aa2.21□□□□□ -2.06
TRM112YNR046W YIL177CP40434 1758 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms