RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W MCP1Q12106 302 aa2.3□□□□□ -2.04
TRM112YNR046W RIO1Q12196 484 aaKnown RBP2.3□□□□□ -2.04
TRM112YNR046W MRS1P07266 363 aa2.29□□□□□ -2.04
TRM112YNR046W FBA1P14540 359 aaKnown RBP2.29□□□□□ -2.04
TRM112YNR046W PEX4P29340 183 aa2.29□□□□□ -2.04
TRM112YNR046W MEI4P29467 408 aa2.29□□□□□ -2.04
TRM112YNR046W YHR180WP38868 163 aa2.29□□□□□ -2.04
TRM112YNR046W ICE2P40499 491 aa2.29□□□□□ -2.04
TRM112YNR046W PRM10P42946 383 aa2.29□□□□□ -2.04
TRM112YNR046W YDR249CQ03787 373 aa2.29□□□□□ -2.04
TRM112YNR046W YET3Q07451 203 aa2.29□□□□□ -2.04
TRM112YNR046W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
TRM112YNR046W USB1Q12208 290 aaKnown RBP2.29□□□□□ -2.04
TRM112YNR046W YFR032C-BQ8TGU2 87 aa2.29□□□□□ -2.04
TRM112YNR046W TIM9O74700 87 aa2.28□□□□□ -2.04
TRM112YNR046W RPB3P16370 318 aaKnown RBP2.28□□□□□ -2.04
TRM112YNR046W CKS1P20486 150 aaKnown RBP2.28□□□□□ -2.04
TRM112YNR046W SNC2P33328 115 aa2.28□□□□□ -2.04
TRM112YNR046W MRPL17P36528 281 aa2.28□□□□□ -2.04
TRM112YNR046W FES1P38260 290 aa2.28□□□□□ -2.04
TRM112YNR046W PHO88P38264 188 aaPredicted RBP2.28□□□□□ -2.04
TRM112YNR046W UMP1P38293 148 aa2.28□□□□□ -2.04
TRM112YNR046W GLE2P40066 365 aa2.28□□□□□ -2.04
TRM112YNR046W RPL33BP41056 107 aaKnown RBP2.28□□□□□ -2.04
TRM112YNR046W ERG25P53045 309 aa2.28□□□□□ -2.04
TRM112YNR046W SCL1P21243 252 aaKnown RBP2.27□□□□□ -2.05
TRM112YNR046W PDS1P40316 373 aaPredicted RBP2.27□□□□□ -2.05
TRM112YNR046W AGE2P40529 298 aa2.27□□□□□ -2.05
TRM112YNR046W GVP36P40531 326 aaKnown RBP2.27□□□□□ -2.05
TRM112YNR046W LSM1P47017 172 aaKnown RBP2.27□□□□□ -2.05
TRM112YNR046W YNR062CP53748 327 aa2.27□□□□□ -2.05
TRM112YNR046W GRE1Q08969 168 aa2.27□□□□□ -2.05
TRM112YNR046W IGO2Q9P305 131 aa2.27□□□□□ -2.05
TRM112YNR046W CNB1P25296 175 aa2.26□□□□□ -2.05
TRM112YNR046W TAH1P25638 111 aaPredicted RBP2.26□□□□□ -2.05
TRM112YNR046W NUF2P33895 451 aa2.26□□□□□ -2.05
TRM112YNR046W YET1P35723 206 aa2.26□□□□□ -2.05
TRM112YNR046W FIG1P38224 298 aa2.26□□□□□ -2.05
TRM112YNR046W AME1P38313 324 aa2.26□□□□□ -2.05
TRM112YNR046W AIM2P39721 246 aa2.26□□□□□ -2.05
TRM112YNR046W YER121WP40076 114 aa2.26□□□□□ -2.05
TRM112YNR046W POG1P40473 351 aa2.26□□□□□ -2.05
TRM112YNR046W TIR3P40552 269 aa2.26□□□□□ -2.05
TRM112YNR046W DAN1P47178 298 aa2.26□□□□□ -2.05
TRM112YNR046W YIP3P53633 176 aa2.26□□□□□ -2.05
TRM112YNR046W HNT1Q04344 158 aaKnown RBP2.26□□□□□ -2.05
TRM112YNR046W SPG3Q04398 127 aaPredicted RBP2.26□□□□□ -2.05
TRM112YNR046W YLR036CQ07986 203 aa2.26□□□□□ -2.05
TRM112YNR046W YDL085C-AQ3E7B7 68 aaKnown RBP2.26□□□□□ -2.05
TRM112YNR046W MBF1O14467 151 aaKnown RBP2.25□□□□□ -2.05
TRM112YNR046W SNF4P12904 322 aa2.25□□□□□ -2.05
TRM112YNR046W PET9P18239 318 aaKnown RBP2.25□□□□□ -2.05
TRM112YNR046W GIM4P40005 111 aaKnown RBP2.25□□□□□ -2.05
TRM112YNR046W YDC1Q02896 317 aa2.25□□□□□ -2.05
TRM112YNR046W NOC4Q06512 552 aaPredicted RBP2.25□□□□□ -2.05
TRM112YNR046W YOL024WQ08172 172 aa2.25□□□□□ -2.05
TRM112YNR046W QCR2P07257 368 aa2.24□□□□□ -2.05
TRM112YNR046W RPS24AP0CX31 135 aaKnown RBP2.24□□□□□ -2.05
TRM112YNR046W RPS24BP0CX32 135 aaKnown RBP2.24□□□□□ -2.05
TRM112YNR046W TRX3P25372 127 aa2.24□□□□□ -2.05
TRM112YNR046W YCR090CP25654 182 aaKnown RBP2.24□□□□□ -2.05
TRM112YNR046W SRP102P36057 244 aaPredicted RBP2.24□□□□□ -2.05
TRM112YNR046W NRG2P38082 220 aa2.24□□□□□ -2.05
TRM112YNR046W YHR022CP38763 256 aa2.24□□□□□ -2.05
TRM112YNR046W SVP26P38869 228 aa2.24□□□□□ -2.05
TRM112YNR046W SOK1P40317 901 aa2.24□□□□□ -2.05
TRM112YNR046W VMA10P48836 114 aaKnown RBP2.24□□□□□ -2.05
TRM112YNR046W DOC1P53068 250 aa2.24□□□□□ -2.05
TRM112YNR046W YNL184CP53876 108 aa2.24□□□□□ -2.05
TRM112YNR046W YNL140CP53910 189 aa2.24□□□□□ -2.05
TRM112YNR046W ARO80Q04052 950 aa2.24□□□□□ -2.05
TRM112YNR046W BOL1Q3E793 110 aa2.24□□□□□ -2.05
TRM112YNR046W ATP15P21306 62 aa2.23□□□□□ -2.05
TRM112YNR046W YBR285WP38354 144 aa2.23□□□□□ -2.05
TRM112YNR046W NRK1P53915 240 aa2.23□□□□□ -2.05
TRM112YNR046W YDR274CP87283 123 aa2.23□□□□□ -2.05
TRM112YNR046W CYT2Q00873 224 aa2.23□□□□□ -2.05
TRM112YNR046W SPC24Q04477 213 aa2.23□□□□□ -2.05
TRM112YNR046W GRX8Q05926 109 aa2.23□□□□□ -2.05
TRM112YNR046W YLR031WQ07978 186 aa2.23□□□□□ -2.05
TRM112YNR046W SKI3P17883 1432 aaKnown RBP2.23□□□□□ -2.05
TRM112YNR046W ECM5Q03214 1411 aa2.23□□□□□ -2.05
TRM112YNR046W VMA22P38784 181 aa2.22□□□□□ -2.05
TRM112YNR046W SRP14P38985 146 aa2.22□□□□□ -2.05
TRM112YNR046W YNL217WP40152 326 aa2.22□□□□□ -2.05
TRM112YNR046W YJL027CP47063 138 aaPredicted RBP2.22□□□□□ -2.05
TRM112YNR046W EAF6P47128 113 aa2.22□□□□□ -2.05
TRM112YNR046W YGR042WP53227 271 aa2.22□□□□□ -2.05
TRM112YNR046W SNO1Q03144 224 aa2.22□□□□□ -2.05
TRM112YNR046W FSF1Q12029 327 aaKnown RBP2.22□□□□□ -2.05
TRM112YNR046W DER1P38307 211 aa2.21□□□□□ -2.06
TRM112YNR046W DSE2P38844 325 aa2.21□□□□□ -2.06
TRM112YNR046W VTC1P40046 129 aaRIP-Chip data2.21□□□□□ -2.06not detected
TRM112YNR046W ARP3P47117 449 aaKnown RBP2.21□□□□□ -2.06
TRM112YNR046W UBC12P52491 188 aa2.21□□□□□ -2.06
TRM112YNR046W IGO1P53897 168 aa2.21□□□□□ -2.06
TRM112YNR046W YLR460CP54007 376 aa2.21□□□□□ -2.06
TRM112YNR046W DGA1Q08650 418 aa2.21□□□□□ -2.06
TRM112YNR046W PET20Q99373 253 aa2.21□□□□□ -2.06
TRM112YNR046W YIL177CP40434 1758 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms