RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C SHE3P38272 425 aaKnown RBP2.83□□□□□ -1.96
VPS33YLR396C SYS1P41544 203 aa2.83□□□□□ -1.96
VPS33YLR396C VHT1P53241 593 aa2.83□□□□□ -1.96
VPS33YLR396C SLX9P53251 210 aaPredicted RBP2.83□□□□□ -1.96
VPS33YLR396C APJ1P53940 528 aa2.83□□□□□ -1.96
VPS33YLR396C YDR366CP87287 132 aa2.83□□□□□ -1.96
VPS33YLR396C RSM10Q03201 203 aa2.83□□□□□ -1.96
VPS33YLR396C YLR179CQ06252 201 aaKnown RBP2.83□□□□□ -1.96
VPS33YLR396C RRT7Q07829 113 aa2.83□□□□□ -1.96
VPS33YLR396C YOR385WQ08909 290 aa2.83□□□□□ -1.96
VPS33YLR396C POM33Q12164 279 aa2.83□□□□□ -1.96
VPS33YLR396C ERP3Q12403 225 aa2.83□□□□□ -1.96
VPS33YLR396C RPS25AQ3E792 108 aaPredicted RBP2.83□□□□□ -1.96
VPS33YLR396C QCR7P00128 127 aa2.82□□□□□ -1.96
VPS33YLR396C ADK1P07170 222 aaKnown RBP2.82□□□□□ -1.96
VPS33YLR396C PAU2P32612 120 aa2.82□□□□□ -1.96
VPS33YLR396C SWD3P38123 315 aa2.82□□□□□ -1.96
VPS33YLR396C YHR177WP38867 453 aa2.82□□□□□ -1.96
VPS33YLR396C PRP39P39682 629 aaKnown RBP2.82□□□□□ -1.96
VPS33YLR396C GIM4P40005 111 aaKnown RBP2.82□□□□□ -1.96
VPS33YLR396C HMF1P40037 129 aaKnown RBP2.82□□□□□ -1.96
VPS33YLR396C YER188WP40103 239 aa2.82□□□□□ -1.96
VPS33YLR396C MMF1P40185 145 aaKnown RBP2.82□□□□□ -1.96
VPS33YLR396C BNS1P50084 137 aa2.82□□□□□ -1.96
VPS33YLR396C NSA1P53136 463 aaPredicted RBP2.82□□□□□ -1.96
VPS33YLR396C YGR042WP53227 271 aa2.82□□□□□ -1.96
VPS33YLR396C PKR1Q03880 122 aaKnown RBP2.82□□□□□ -1.96
VPS33YLR396C GRX8Q05926 109 aa2.82□□□□□ -1.96
VPS33YLR396C CTR3Q06686 241 aa2.82□□□□□ -1.96
VPS33YLR396C CSI2Q08054 341 aa2.82□□□□□ -1.96
VPS33YLR396C NAT5Q08689 176 aa2.82□□□□□ -1.96
VPS33YLR396C YLR118CQ12354 227 aa2.82□□□□□ -1.96
VPS33YLR396C YOP1Q12402 180 aa2.82□□□□□ -1.96
VPS33YLR396C COX19Q3E731 98 aa2.82□□□□□ -1.96
VPS33YLR396C TFB5Q3E7C1 72 aaPredicted RBP2.82□□□□□ -1.96
VPS33YLR396C YCL012CQ8J0M4 134 aa2.82□□□□□ -1.96
VPS33YLR396C YPR096CO13587 100 aa2.81□□□□□ -1.96
VPS33YLR396C COX2P00410 251 aa2.81□□□□□ -1.96
VPS33YLR396C TPI1P00942 248 aaKnown RBP2.81□□□□□ -1.96
VPS33YLR396C HAP3P13434 144 aa2.81□□□□□ -1.96
VPS33YLR396C MIG1P27705 504 aa2.81□□□□□ -1.96
VPS33YLR396C POP8P38208 133 aa2.81□□□□□ -1.96
VPS33YLR396C MGA1P53050 456 aa2.81□□□□□ -1.96
VPS33YLR396C PGA1P53896 198 aa2.81□□□□□ -1.96
VPS33YLR396C ACT1P60010 375 aaKnown RBP2.81□□□□□ -1.96
VPS33YLR396C VPS28Q02767 242 aa2.81□□□□□ -1.96
VPS33YLR396C UPS3Q04006 179 aa2.81□□□□□ -1.96
VPS33YLR396C GMC1Q04399 608 aa2.81□□□□□ -1.96
VPS33YLR396C YMR315WQ04869 349 aaKnown RBP2.81□□□□□ -1.96
VPS33YLR396C MSC3Q05812 728 aa2.81□□□□□ -1.96
VPS33YLR396C PEX30Q06169 523 aa2.81□□□□□ -1.96
VPS33YLR396C YLR036CQ07986 203 aa2.81□□□□□ -1.96
VPS33YLR396C FCF2Q12035 217 aaPredicted RBP2.81□□□□□ -1.96
VPS33YLR396C TDH2P00358 332 aaKnown RBP2.81□□□□□ -1.96
VPS33YLR396C COX5BP00425 151 aa2.81□□□□□ -1.96
VPS33YLR396C PAU19P0CE85 124 aa2.81□□□□□ -1.96
VPS33YLR396C PAU21P0CE86 164 aa2.81□□□□□ -1.96
VPS33YLR396C PAU22P0CE87 164 aa2.81□□□□□ -1.96
VPS33YLR396C DDI2P0CH63 225 aa2.81□□□□□ -1.96
VPS33YLR396C DDI3P0CH64 225 aa2.81□□□□□ -1.96
VPS33YLR396C RPL12AP0CX53 165 aaKnown RBP2.81□□□□□ -1.96
VPS33YLR396C RPL12BP0CX54 165 aa2.81□□□□□ -1.96
VPS33YLR396C RBK1P25332 333 aa2.81□□□□□ -1.96
VPS33YLR396C PAU3P25610 124 aa2.81□□□□□ -1.96
VPS33YLR396C SUA7P29055 345 aaPredicted RBP2.81□□□□□ -1.96
VPS33YLR396C ERG24P32462 438 aaKnown RBP2.81□□□□□ -1.96
VPS33YLR396C YKL075CP36083 450 aa2.81□□□□□ -1.96
VPS33YLR396C PAN3P36102 679 aaPredicted RBP2.81□□□□□ -1.96
VPS33YLR396C DRE2P36152 348 aa2.81□□□□□ -1.96
VPS33YLR396C LDB7P38210 180 aa2.81□□□□□ -1.96
VPS33YLR396C SUR2P38992 349 aa2.81□□□□□ -1.96
VPS33YLR396C COX14P39103 70 aa2.81□□□□□ -1.96
VPS33YLR396C TOS2P50078 622 aa2.81□□□□□ -1.96
VPS33YLR396C ADD37Q03233 198 aa2.81□□□□□ -1.96
VPS33YLR396C PIN3Q06449 215 aa2.81□□□□□ -1.96
VPS33YLR396C LDB18Q07887 179 aa2.81□□□□□ -1.96
VPS33YLR396C COQ10Q08058 207 aa2.81□□□□□ -1.96
VPS33YLR396C YPL257WQ08974 193 aa2.81□□□□□ -1.96
VPS33YLR396C AIM45Q12480 344 aaKnown RBP2.81□□□□□ -1.96
VPS33YLR396C URA8P38627 578 aaPredicted RBP2.8□□□□□ -1.96
VPS33YLR396C RPS20P38701 121 aaKnown RBP2.8□□□□□ -1.96
VPS33YLR396C BDH1P39714 382 aa2.8□□□□□ -1.96
VPS33YLR396C ICE2P40499 491 aa2.8□□□□□ -1.96
VPS33YLR396C NAS2P40555 220 aa2.8□□□□□ -1.96
VPS33YLR396C YJR085CP47131 105 aaKnown RBP2.8□□□□□ -1.96
VPS33YLR396C SSU72P53538 206 aaPredicted RBP2.8□□□□□ -1.96
VPS33YLR396C YNR066CP53752 436 aa2.8□□□□□ -1.96
VPS33YLR396C YNL140CP53910 189 aa2.8□□□□□ -1.96
VPS33YLR396C BUD25P85052 153 aa2.8□□□□□ -1.96
VPS33YLR396C RHO3Q00245 231 aaKnown RBP2.8□□□□□ -1.96
VPS33YLR396C TMA23Q03525 211 aa2.8□□□□□ -1.96
VPS33YLR396C CGI121Q03705 181 aaKnown RBP2.8□□□□□ -1.96
VPS33YLR396C PST1Q12355 444 aa2.8□□□□□ -1.96
VPS33YLR396C YLR146W-AQ2V2P1 62 aa2.8□□□□□ -1.96
VPS33YLR396C OPI3P05375 206 aa2.8□□□□□ -1.96
VPS33YLR396C MKK1P32490 508 aa2.8□□□□□ -1.96
VPS33YLR396C TCA17P32613 152 aa2.8□□□□□ -1.96
VPS33YLR396C YEL045CP32616 141 aa2.8□□□□□ -1.96
VPS33YLR396C HMT1P38074 348 aa2.8□□□□□ -1.96
VPS33YLR396C YPC1P38298 316 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms