RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C WSC2P53832 503 aa7.7□□□□□ -1.18
SEC61YLR378C APJ1P53940 528 aa7.7□□□□□ -1.18
SEC61YLR378C HOF1Q05080 669 aa7.7□□□□□ -1.18
SEC61YLR378C ROX3P25046 220 aa7.69□□□□□ -1.18
SEC61YLR378C LDS1P31379 325 aa7.69□□□□□ -1.18
SEC61YLR378C TCA17P32613 152 aa7.69□□□□□ -1.18
SEC61YLR378C REC104P33323 182 aa7.69□□□□□ -1.18
SEC61YLR378C RFC2P40348 353 aa7.69□□□□□ -1.18
SEC61YLR378C SGN1P40561 250 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
SEC61YLR378C ODC1Q03028 310 aa7.69□□□□□ -1.18
SEC61YLR378C YMR082CQ04276 118 aa7.69□□□□□ -1.18
SEC61YLR378C WSC3Q12215 556 aa7.69□□□□□ -1.18
SEC61YLR378C ATG5Q12380 294 aa7.69□□□□□ -1.18
SEC61YLR378C SPS100P13130 326 aa7.69□□□□□ -1.18
SEC61YLR378C ATP10P18496 279 aa7.69□□□□□ -1.18
SEC61YLR378C YMR31P19955 123 aa7.69□□□□□ -1.18
SEC61YLR378C QRI1P43123 477 aaKnown RBP7.69□□□□□ -1.18
SEC61YLR378C PIR5P46999 287 aa7.69□□□□□ -1.18
SEC61YLR378C ERG25P53045 309 aa7.69□□□□□ -1.18
SEC61YLR378C YGL262WP53054 175 aa7.69□□□□□ -1.18
SEC61YLR378C GEP7P53171 287 aa7.69□□□□□ -1.18
SEC61YLR378C YNR066CP53752 436 aa7.69□□□□□ -1.18
SEC61YLR378C FMP41P53889 259 aaKnown RBP7.69□□□□□ -1.18
SEC61YLR378C PML1Q07930 204 aaPredicted RBP7.69□□□□□ -1.18
SEC61YLR378C YPL264CQ08980 353 aa7.69□□□□□ -1.18
SEC61YLR378C COA2Q3E823 68 aa7.69□□□□□ -1.18
SEC61YLR378C MRS4P23500 304 aa7.68□□□□□ -1.18
SEC61YLR378C MSK1P32048 576 aa7.68□□□□□ -1.18
SEC61YLR378C RTC3P38804 111 aaPredicted RBP7.68□□□□□ -1.18
SEC61YLR378C CAF16P43569 289 aa7.68□□□□□ -1.18
SEC61YLR378C MCM22P47167 239 aa7.68□□□□□ -1.18
SEC61YLR378C TEX1P53851 422 aaKnown RBP7.68□□□□□ -1.18
SEC61YLR378C YNL092WP53934 400 aa7.68□□□□□ -1.18
SEC61YLR378C ERV25P54837 211 aaKnown RBP7.68□□□□□ -1.18
SEC61YLR378C YML108WQ03759 105 aa7.68□□□□□ -1.18
SEC61YLR378C YPD1Q07688 167 aa7.68□□□□□ -1.18
SEC61YLR378C BOL1Q3E793 110 aa7.68□□□□□ -1.18
SEC61YLR378C YMR105W-AQ8TGS8 64 aa7.68□□□□□ -1.18
SEC61YLR378C MTR2P34232 184 aaKnown RBP7.67□□□□□ -1.18
SEC61YLR378C SOR1P35497 357 aaKnown RBP7.67□□□□□ -1.18
SEC61YLR378C CBT1P36038 271 aaPredicted RBP7.67□□□□□ -1.18
SEC61YLR378C YBR292CP38357 123 aa7.67□□□□□ -1.18
SEC61YLR378C SPC25P40014 221 aa7.67□□□□□ -1.18
SEC61YLR378C YJR056CP47115 236 aa7.67□□□□□ -1.18
SEC61YLR378C PDR17P53844 350 aa7.67□□□□□ -1.18
SEC61YLR378C SOR2Q07786 357 aa7.67□□□□□ -1.18
SEC61YLR378C YBR255C-AQ3E776 120 aa7.67□□□□□ -1.18
SEC61YLR378C YOS1Q3E834 85 aa7.67□□□□□ -1.18
SEC61YLR378C GCN1P33892 2672 aaKnown RBP7.66□□□□□ -1.18
SEC61YLR378C VPS63O13549 108 aa7.66□□□□□ -1.18
SEC61YLR378C UPS2P35200 230 aa7.66□□□□□ -1.18
SEC61YLR378C CUE1P38428 203 aa7.66□□□□□ -1.18
SEC61YLR378C CTR2P38865 189 aa7.66□□□□□ -1.18
SEC61YLR378C SMM1P53720 384 aaKnown RBP7.66□□□□□ -1.18
SEC61YLR378C YNR064CP53750 290 aa7.66□□□□□ -1.18
SEC61YLR378C TIM11P81449 96 aaPredicted RBP7.66□□□□□ -1.18
SEC61YLR378C TIM10P87108 93 aa7.66□□□□□ -1.18
SEC61YLR378C FSH2Q05015 223 aa7.66□□□□□ -1.18
SEC61YLR378C YLR179CQ06252 201 aaKnown RBP7.66□□□□□ -1.18
SEC61YLR378C RPL9AP05738 191 aaKnown RBP7.65□□□□□ -1.18
SEC61YLR378C YKL187CP34231 750 aa7.65□□□□□ -1.18
SEC61YLR378C PEX7P39108 375 aa7.65□□□□□ -1.18
SEC61YLR378C SBH2P52871 88 aa7.65□□□□□ -1.18
SEC61YLR378C ADD37Q03233 198 aa7.65□□□□□ -1.18
SEC61YLR378C IRC25Q07951 179 aa7.65□□□□□ -1.18
SEC61YLR378C SDO1Q07953 250 aaKnown RBP7.65□□□□□ -1.18
SEC61YLR378C YDL009CQ12210 107 aa7.65□□□□□ -1.18
SEC61YLR378C VMA9Q3E7B6 73 aa7.65□□□□□ -1.18
SEC61YLR378C HBN1Q96VH4 193 aa7.65□□□□□ -1.18
SEC61YLR378C APA2P22108 325 aa7.64□□□□□ -1.19
SEC61YLR378C ARP3P47117 449 aaKnown RBP7.64□□□□□ -1.19
SEC61YLR378C RPL9BP51401 191 aaKnown RBP7.64□□□□□ -1.19
SEC61YLR378C YGR050CP53231 118 aa7.64□□□□□ -1.19
SEC61YLR378C PEF1P53238 335 aa7.64□□□□□ -1.19
SEC61YLR378C TMA23Q03525 211 aa7.64□□□□□ -1.19
SEC61YLR378C YDL242WQ07746 117 aa7.64□□□□□ -1.19
SEC61YLR378C PRR2Q12310 699 aa7.64□□□□□ -1.19
SEC61YLR378C YDR157WA0A023PZE8 133 aa7.63□□□□□ -1.19
SEC61YLR378C URA5P13298 226 aaKnown RBP7.63□□□□□ -1.19
SEC61YLR378C RIB5P38145 238 aa7.63□□□□□ -1.19
SEC61YLR378C YHL044WP38727 235 aa7.63□□□□□ -1.19
SEC61YLR378C DCS1Q06151 350 aa7.63□□□□□ -1.19
SEC61YLR378C TDA6Q06466 467 aa7.63□□□□□ -1.19
SEC61YLR378C COX19Q3E731 98 aa7.63□□□□□ -1.19
SEC61YLR378C IES6P32617 166 aa7.62□□□□□ -1.19
SEC61YLR378C PUS4P48567 403 aaKnown RBP7.62□□□□□ -1.19
SEC61YLR378C ARR2Q06597 130 aa7.62□□□□□ -1.19
SEC61YLR378C YOR015WQ12169 119 aa7.62□□□□□ -1.19
SEC61YLR378C YOR029WQ12243 111 aa7.62□□□□□ -1.19
SEC61YLR378C YGL258W-AQ3E740 77 aa7.62□□□□□ -1.19
SEC61YLR378C PCC1Q3E833 88 aa7.62□□□□□ -1.19
SEC61YLR378C YCR025CP25352 136 aa7.61□□□□□ -1.19
SEC61YLR378C SPS18P32572 300 aa7.61□□□□□ -1.19
SEC61YLR378C SIP1P32578 815 aa7.61□□□□□ -1.19
SEC61YLR378C GPI18P38211 433 aa7.61□□□□□ -1.19
SEC61YLR378C COX15P40086 486 aa7.61□□□□□ -1.19
SEC61YLR378C GAT2P40209 560 aa7.61□□□□□ -1.19
SEC61YLR378C YJL118WP47022 219 aa7.61□□□□□ -1.19
SEC61YLR378C YGL114WP53134 725 aa7.61□□□□□ -1.19
SEC61YLR378C YCL048W-AQ2V2Q2 79 aa7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms