RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C GVP36P40531 326 aaKnown RBP1.09□□□□□ -2.24
SGD1YLR336C AIM25P47140 327 aa1.09□□□□□ -2.24
SGD1YLR336C CPA1P07258 411 aaKnown RBP1.08□□□□□ -2.24
SGD1YLR336C RPB3P16370 318 aaKnown RBP1.08□□□□□ -2.24
SGD1YLR336C ATP15P21306 62 aa1.08□□□□□ -2.24
SGD1YLR336C BET1P22804 142 aa1.08□□□□□ -2.24
SGD1YLR336C YDR274CP87283 123 aa1.08□□□□□ -2.24
SGD1YLR336C MRPS17Q03246 237 aaPredicted RBP1.08□□□□□ -2.24
SGD1YLR336C YMR226CQ05016 267 aaKnown RBP1.08□□□□□ -2.24
SGD1YLR336C GET4Q12125 312 aa1.08□□□□□ -2.24
SGD1YLR336C RPL25P04456 142 aaKnown RBP1.08□□□□□ -2.24
SGD1YLR336C FZF1P32805 299 aa1.08□□□□□ -2.24
SGD1YLR336C YET1P35723 206 aa1.08□□□□□ -2.24
SGD1YLR336C TRM5P38793 499 aa1.08□□□□□ -2.24
SGD1YLR336C GAA1P39012 614 aa1.08□□□□□ -2.24
SGD1YLR336C VTC1P40046 129 aaRIP-Chip data1.08□□□□□ -2.24not detected
SGD1YLR336C ABP140Q08641 628 aaKnown RBP1.08□□□□□ -2.24
SGD1YLR336C QCR7P00128 127 aa1.07□□□□□ -2.24
SGD1YLR336C URA5P13298 226 aaKnown RBP1.07□□□□□ -2.24
SGD1YLR336C AVT2P39981 480 aa1.07□□□□□ -2.24
SGD1YLR336C BUD25P85052 153 aa1.07□□□□□ -2.24
SGD1YLR336C CSI2Q08054 341 aa1.07□□□□□ -2.24
SGD1YLR336C FSF1Q12029 327 aaKnown RBP1.07□□□□□ -2.24
SGD1YLR336C FLO9P39712 1322 aa1.07□□□□□ -2.24
SGD1YLR336C APA2P22108 325 aa1.07□□□□□ -2.24
SGD1YLR336C CGR1P53188 120 aa1.07□□□□□ -2.24
SGD1YLR336C MDM32Q12171 622 aa1.07□□□□□ -2.24
SGD1YLR336C MAG1P22134 296 aaKnown RBP1.06□□□□□ -2.24
SGD1YLR336C SNC2P33328 115 aa1.06□□□□□ -2.24
SGD1YLR336C HMF1P40037 129 aaKnown RBP1.06□□□□□ -2.24
SGD1YLR336C YER135CP40082 130 aa1.06□□□□□ -2.24
SGD1YLR336C ERG10P41338 398 aaKnown RBP1.06□□□□□ -2.24
SGD1YLR336C GPM2Q12008 311 aa1.06□□□□□ -2.24
SGD1YLR336C RAD9P14737 1309 aa1.06□□□□□ -2.24
SGD1YLR336C IKI3Q06706 1349 aaKnown RBP1.06□□□□□ -2.24
SGD1YLR336C MRS1P07266 363 aa1.06□□□□□ -2.24
SGD1YLR336C YKR045CP36138 183 aa1.06□□□□□ -2.24
SGD1YLR336C GLE2P40066 365 aa1.06□□□□□ -2.24
SGD1YLR336C MMS2P53152 137 aa1.06□□□□□ -2.24
SGD1YLR336C GET1P53192 235 aa1.06□□□□□ -2.24
SGD1YLR336C YLR162WQ06235 118 aa1.06□□□□□ -2.24
SGD1YLR336C CYR1P08678 2026 aaKnown RBP1.05□□□□□ -2.24
SGD1YLR336C YPK2P18961 677 aa1.05□□□□□ -2.24
SGD1YLR336C YBR285WP38354 144 aa1.05□□□□□ -2.24
SGD1YLR336C SIR2P06700 562 aa1.04□□□□□ -2.24
SGD1YLR336C RPL27AP0C2H6 136 aaKnown RBP1.04□□□□□ -2.24
SGD1YLR336C CNB1P25296 175 aa1.04□□□□□ -2.24
SGD1YLR336C ASF2P32448 525 aaPredicted RBP1.04□□□□□ -2.24
SGD1YLR336C YOL162WP0CF19 215 aa1.04□□□□□ -2.24
SGD1YLR336C MPC3P53311 146 aa1.04□□□□□ -2.24
SGD1YLR336C POP3P53833 195 aaPredicted RBP1.04□□□□□ -2.24
SGD1YLR336C NUM1Q00402 2748 aa1.04□□□□□ -2.24
SGD1YLR336C CKS1P20486 150 aaKnown RBP1.03□□□□□ -2.24
SGD1YLR336C ADE1P27616 306 aa1.03□□□□□ -2.24
SGD1YLR336C OPY1P38271 328 aa1.03□□□□□ -2.24
SGD1YLR336C VMA22P38784 181 aa1.03□□□□□ -2.24
SGD1YLR336C ARO80Q04052 950 aa1.03□□□□□ -2.24
SGD1YLR336C HNT1Q04344 158 aaKnown RBP1.03□□□□□ -2.24
SGD1YLR336C ATG40Q99325 256 aa1.03□□□□□ -2.24
SGD1YLR336C YLR236CA0A023PZG4 107 aa1.03□□□□□ -2.24
SGD1YLR336C RPL2AP0CX45 254 aaKnown RBP1.03□□□□□ -2.24
SGD1YLR336C RPL2BP0CX46 254 aaKnown RBP1.03□□□□□ -2.24
SGD1YLR336C OCH1P31755 480 aa1.03□□□□□ -2.24
SGD1YLR336C KDX1P36005 433 aa1.03□□□□□ -2.24
SGD1YLR336C ARP3P47117 449 aaKnown RBP1.03□□□□□ -2.24
SGD1YLR336C KNH1P50112 268 aa1.03□□□□□ -2.24
SGD1YLR336C MET5P47169 1442 aa1.03□□□□□ -2.25
SGD1YLR336C MBF1O14467 151 aaKnown RBP1.02□□□□□ -2.25
SGD1YLR336C YGL010WP25338 174 aa1.02□□□□□ -2.25
SGD1YLR336C SHE2P36068 246 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
SGD1YLR336C YBR220CP38318 560 aa1.02□□□□□ -2.25
SGD1YLR336C ANT1Q06497 328 aa1.02□□□□□ -2.25
SGD1YLR336C YOR093CQ12275 1648 aa1.02□□□□□ -2.25
SGD1YLR336C POR1P04840 283 aaKnown RBP1.02□□□□□ -2.25
SGD1YLR336C YBR209WP38311 105 aa1.02□□□□□ -2.25
SGD1YLR336C SAY1P53324 424 aa1.02□□□□□ -2.25
SGD1YLR336C IGO2Q9P305 131 aa1.02□□□□□ -2.25
SGD1YLR336C UPS2P35200 230 aa1.02□□□□□ -2.25
SGD1YLR336C TMA19P35691 167 aaKnown RBP1.02□□□□□ -2.25
SGD1YLR336C ERJ5P43613 295 aaPredicted RBP1.02□□□□□ -2.25
SGD1YLR336C UBC12P52491 188 aa1.02□□□□□ -2.25
SGD1YLR336C YNL184CP53876 108 aa1.02□□□□□ -2.25
SGD1YLR336C ODC2Q99297 307 aa1.02□□□□□ -2.25
SGD1YLR336C FAS1P07149 2051 aaKnown RBP1.01□□□□□ -2.25
SGD1YLR336C SPO13P23624 291 aa1.01□□□□□ -2.25
SGD1YLR336C YJR111CP47148 283 aaKnown RBP1.01□□□□□ -2.25
SGD1YLR336C DGA1Q08650 418 aa1.01□□□□□ -2.25
SGD1YLR336C MYO2P19524 1574 aaKnown RBP1.01□□□□□ -2.25
SGD1YLR336C TFC1P32367 649 aa1.01□□□□□ -2.25
SGD1YLR336C YEA4P40004 342 aa1.01□□□□□ -2.25
SGD1YLR336C RPL13BP40212 199 aaKnown RBP1.01□□□□□ -2.25
SGD1YLR336C SER2P42941 309 aa1.01□□□□□ -2.25
SGD1YLR336C SKI6P46948 246 aaPredicted RBP1.01□□□□□ -2.25
SGD1YLR336C ARO8P53090 500 aaKnown RBP1.01□□□□□ -2.25
SGD1YLR336C NUP49Q02199 472 aa1.01□□□□□ -2.25
SGD1YLR336C RAD28Q12021 506 aa1.01□□□□□ -2.25
SGD1YLR336C RPL13AQ12690 199 aaPredicted RBP1.01□□□□□ -2.25
SGD1YLR336C UBR2Q07963 1872 aa1□□□□□ -2.25
SGD1YLR336C CUP1-1P0CX80 61 aa1□□□□□ -2.25
SGD1YLR336C CUP1-2P0CX81 61 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms