RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C TAD2P47058 250 aa8.62□□□□□ -1.03
SHM2YLR058C PNC1P53184 216 aaKnown RBP8.62□□□□□ -1.03
SHM2YLR058C ARR2Q06597 130 aa8.62□□□□□ -1.03
SHM2YLR058C YPD1Q07688 167 aa8.62□□□□□ -1.03
SHM2YLR058C PAM18Q07914 168 aa8.62□□□□□ -1.03
SHM2YLR058C YLR146W-AQ2V2P1 62 aa8.62□□□□□ -1.03
SHM2YLR058C YBR255C-AQ3E776 120 aa8.62□□□□□ -1.03
SHM2YLR058C YOS1Q3E834 85 aa8.62□□□□□ -1.03
SHM2YLR058C YBR298C-AQ8TGK4 73 aa8.62□□□□□ -1.03
SHM2YLR058C ISN1Q99312 450 aa8.62□□□□□ -1.03
SHM2YLR058C YMR31P19955 123 aa8.61□□□□□ -1.03
SHM2YLR058C SPS18P32572 300 aa8.61□□□□□ -1.03
SHM2YLR058C VMA11P32842 164 aa8.61□□□□□ -1.03
SHM2YLR058C PHM8P40025 321 aa8.61□□□□□ -1.03
SHM2YLR058C YJL118WP47022 219 aa8.61□□□□□ -1.03
SHM2YLR058C JAC1P53193 184 aa8.61□□□□□ -1.03
SHM2YLR058C GPI15P53961 229 aa8.61□□□□□ -1.03
SHM2YLR058C ATG5Q12380 294 aa8.61□□□□□ -1.03
SHM2YLR058C DBP2P24783 546 aaKnown RBP8.6□□□□□ -1.03
SHM2YLR058C CBT1P36038 271 aaPredicted RBP8.6□□□□□ -1.03
SHM2YLR058C MSO1P53604 210 aaKnown RBP8.6□□□□□ -1.03
SHM2YLR058C YIF1P53845 314 aaKnown RBP8.6□□□□□ -1.03
SHM2YLR058C ANT1Q06497 328 aa8.6□□□□□ -1.03
SHM2YLR058C RPL9AP05738 191 aaKnown RBP8.59□□□□□ -1.03
SHM2YLR058C LSM12P38828 187 aaKnown RBP8.59□□□□□ -1.03
SHM2YLR058C YHR138CP38841 114 aaPredicted RBP8.59□□□□□ -1.03
SHM2YLR058C PKP2P53170 491 aa8.59□□□□□ -1.03
SHM2YLR058C DID2P69771 204 aa8.59□□□□□ -1.03
SHM2YLR058C HED1Q03937 162 aa8.59□□□□□ -1.03
SHM2YLR058C ERP1Q05359 219 aaKnown RBP8.59□□□□□ -1.03
SHM2YLR058C YEA6P39953 335 aa8.58□□□□□ -1.04
SHM2YLR058C RFC2P40348 353 aa8.58□□□□□ -1.04
SHM2YLR058C RPL9BP51401 191 aaKnown RBP8.58□□□□□ -1.04
SHM2YLR058C APJ1P53940 528 aa8.58□□□□□ -1.04
SHM2YLR058C YKL162CP36052 402 aa8.57□□□□□ -1.04
SHM2YLR058C AGX1P43567 385 aa8.57□□□□□ -1.04
SHM2YLR058C YGL117WP53133 265 aa8.57□□□□□ -1.04
SHM2YLR058C YGR045CP53229 120 aa8.57□□□□□ -1.04
SHM2YLR058C MIX17Q03667 156 aa8.57□□□□□ -1.04
SHM2YLR058C ADH6Q04894 360 aaKnown RBP8.57□□□□□ -1.04
SHM2YLR058C YPR071WQ12346 211 aa8.57□□□□□ -1.04
SHM2YLR058C VPS63O13549 108 aa8.56□□□□□ -1.04
SHM2YLR058C ERV1P27882 189 aa8.56□□□□□ -1.04
SHM2YLR058C PMU1P36069 295 aa8.56□□□□□ -1.04
SHM2YLR058C LSM4P40070 187 aaKnown RBP8.56□□□□□ -1.04
SHM2YLR058C AIR1P40507 360 aaKnown RBP8.56□□□□□ -1.04
SHM2YLR058C ARP3P47117 449 aaKnown RBP8.56□□□□□ -1.04
SHM2YLR058C EST3Q03096 181 aa8.56□□□□□ -1.04
SHM2YLR058C AIM45Q12480 344 aaKnown RBP8.56□□□□□ -1.04
SHM2YLR058C COA2Q3E823 68 aa8.56□□□□□ -1.04
SHM2YLR058C ORM1P53224 222 aa8.55□□□□□ -1.04
SHM2YLR058C FSH2Q05015 223 aa8.55□□□□□ -1.04
SHM2YLR058C HOF1Q05080 669 aa8.55□□□□□ -1.04
SHM2YLR058C EMP24P32803 203 aaKnown RBP8.54□□□□□ -1.04
SHM2YLR058C ASP1P38986 381 aaPredicted RBP8.54□□□□□ -1.04
SHM2YLR058C GCV3P39726 170 aaPredicted RBP8.54□□□□□ -1.04
SHM2YLR058C STD1Q02794 444 aa8.54□□□□□ -1.04
SHM2YLR058C YMR090WQ04304 227 aaKnown RBP8.54□□□□□ -1.04
SHM2YLR058C YMR317WQ04893 1140 aa8.54□□□□□ -1.04
SHM2YLR058C BER1Q06688 274 aaKnown RBP8.54□□□□□ -1.04
SHM2YLR058C AEP3Q12089 606 aa8.54□□□□□ -1.04
SHM2YLR058C ATO3Q12359 275 aa8.54□□□□□ -1.04
SHM2YLR058C FMP16Q12497 93 aa8.54□□□□□ -1.04
SHM2YLR058C SRY1P36007 326 aa8.54□□□□□ -1.04
SHM2YLR058C SLM6P38343 150 aa8.54□□□□□ -1.04
SHM2YLR058C SNX4P47057 423 aa8.54□□□□□ -1.04
SHM2YLR058C YJR056CP47115 236 aa8.54□□□□□ -1.04
SHM2YLR058C YGR050CP53231 118 aa8.54□□□□□ -1.04
SHM2YLR058C YNL234WP53857 426 aa8.54□□□□□ -1.04
SHM2YLR058C TIM44Q01852 431 aa8.54□□□□□ -1.04
SHM2YLR058C FCF2Q12035 217 aaPredicted RBP8.54□□□□□ -1.04
SHM2YLR058C ATG31Q12421 196 aa8.54□□□□□ -1.04
SHM2YLR058C BGL2P15703 313 aaKnown RBP8.53□□□□□ -1.04
SHM2YLR058C RPD3P32561 433 aa8.53□□□□□ -1.04
SHM2YLR058C CRH1P53301 507 aa8.53□□□□□ -1.04
SHM2YLR058C YMR082CQ04276 118 aa8.53□□□□□ -1.04
SHM2YLR058C TMA10Q06177 86 aa8.53□□□□□ -1.04
SHM2YLR058C YPL264CQ08980 353 aa8.53□□□□□ -1.04
SHM2YLR058C HBN1Q96VH4 193 aa8.53□□□□□ -1.04
SHM2YLR058C ADE8P04161 214 aa8.52□□□□□ -1.05
SHM2YLR058C HEM13P11353 328 aaKnown RBP8.52□□□□□ -1.05
SHM2YLR058C VMA7P39111 118 aa8.52□□□□□ -1.05
SHM2YLR058C FCY1Q12178 158 aa8.52□□□□□ -1.05
SHM2YLR058C URA5P13298 226 aaKnown RBP8.51□□□□□ -1.05
SHM2YLR058C MIA40P36046 403 aa8.51□□□□□ -1.05
SHM2YLR058C ATP3P38077 311 aaKnown RBP8.51□□□□□ -1.05
SHM2YLR058C ECM31P38122 312 aa8.51□□□□□ -1.05
SHM2YLR058C YEA4P40004 342 aa8.51□□□□□ -1.05
SHM2YLR058C DFG10P40526 253 aa8.51□□□□□ -1.05
SHM2YLR058C UBI4P0CG63 381 aaKnown RBP8.5□□□□□ -1.05
SHM2YLR058C SRB7P47822 140 aa8.5□□□□□ -1.05
SHM2YLR058C BUL1P48524 976 aa8.5□□□□□ -1.05
SHM2YLR058C YIP1P53039 248 aa8.5□□□□□ -1.05
SHM2YLR058C YGR151CP53287 111 aa8.5□□□□□ -1.05
SHM2YLR058C PDR17P53844 350 aa8.5□□□□□ -1.05
SHM2YLR058C RAX2Q12465 1220 aa8.5□□□□□ -1.05
SHM2YLR058C YHR213W-AQ8TGT4 77 aa8.5□□□□□ -1.05
SHM2YLR058C HTB1P02293 131 aaKnown RBP8.49□□□□□ -1.05
SHM2YLR058C NOP1P15646 327 aaKnown RBP8.49□□□□□ -1.05
SHM2YLR058C RPB9P27999 122 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms