RNA–Protein interactions for RNA: YKR004C

ECM9, Transcript of Non-essential protein of unknown function, yeast

Gene ECM9, Length 1,134 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM9	YKR004C	KDX1	P36005	433 aa		0.92	□□□□□ -2.26
ECM9	YKR004C	SOK1	P40317	901 aa		0.92	□□□□□ -2.26
ECM9	YKR004C	FLX1	P40464	311 aa		0.92	□□□□□ -2.26
ECM9	YKR004C	MGA1	P53050	456 aa		0.92	□□□□□ -2.26
ECM9	YKR004C	ARO8	P53090	500 aa	Known RBP	0.92	□□□□□ -2.26
ECM9	YKR004C	PET191	Q02772	108 aa		0.92	□□□□□ -2.26
ECM9	YKR004C	RCE1	Q03530	315 aa		0.92	□□□□□ -2.26
ECM9	YKR004C	YHR007C-A	Q07074	71 aa		0.92	□□□□□ -2.26
ECM9	YKR004C	SEY1	Q99287	776 aa		0.92	□□□□□ -2.26
ECM9	YKR004C	YIL177C	P40434	1758 aa		0.91	□□□□□ -2.26
ECM9	YKR004C	YJL225C	P40889	1758 aa		0.91	□□□□□ -2.26
ECM9	YKR004C	YHR212W-A	P0CX91	67 aa		0.91	□□□□□ -2.26
ECM9	YKR004C	PRX1	P34227	261 aa	Known RBP	0.91	□□□□□ -2.26
ECM9	YKR004C	ERG28	P40030	148 aa		0.91	□□□□□ -2.26
ECM9	YKR004C	ADO1	P47143	340 aa	Known RBP	0.91	□□□□□ -2.26
ECM9	YKR004C	RPL37B	P51402	88 aa	Known RBP	0.91	□□□□□ -2.26
ECM9	YKR004C	JLP1	Q12358	412 aa		0.91	□□□□□ -2.26
ECM9	YKR004C	YER188C-A	P0C0V2	99 aa		0.9	□□□□□ -2.27
ECM9	YKR004C	YBR121C-A	P0C5L4	52 aa		0.9	□□□□□ -2.27
ECM9	YKR004C	EDC3	P39998	551 aa	Known RBP	0.9	□□□□□ -2.27
ECM9	YKR004C	RTR1	P40084	226 aa	Predicted RBP	0.9	□□□□□ -2.27
ECM9	YKR004C	YFL065C	P43539	102 aa		0.9	□□□□□ -2.27
ECM9	YKR004C	PDR17	P53844	350 aa		0.9	□□□□□ -2.27
ECM9	YKR004C	YMR007W	Q03675	126 aa		0.9	□□□□□ -2.27
ECM9	YKR004C	YER034W	P40022	185 aa	Known RBP	0.89	□□□□□ -2.27
ECM9	YKR004C	YNL194C	P40169	301 aa		0.89	□□□□□ -2.27
ECM9	YKR004C	YPL073C	P40323	161 aa		0.89	□□□□□ -2.27
ECM9	YKR004C	YNL247W	P53852	767 aa	Known RBP	0.89	□□□□□ -2.27
ECM9	YKR004C	CWC27	Q02770	301 aa		0.89	□□□□□ -2.27
ECM9	YKR004C	YOL160W	Q08321	113 aa		0.89	□□□□□ -2.27
ECM9	YKR004C	NHP6B	P11633	99 aa	Known RBP	0.88	□□□□□ -2.27
ECM9	YKR004C	CKS1	P20486	150 aa	Known RBP	0.88	□□□□□ -2.27
ECM9	YKR004C	BMH2	P34730	273 aa	Known RBP	0.88	□□□□□ -2.27
ECM9	YKR004C	CBT1	P36038	271 aa	Predicted RBP	0.88	□□□□□ -2.27
ECM9	YKR004C	YHL042W	P38729	150 aa		0.88	□□□□□ -2.27
ECM9	YKR004C	TVP23	P38962	199 aa		0.88	□□□□□ -2.27
ECM9	YKR004C	OTU1	P43558	301 aa		0.88	□□□□□ -2.27
ECM9	YKR004C	IRC18	P47056	224 aa		0.88	□□□□□ -2.27
ECM9	YKR004C	MPC3	P53311	146 aa		0.88	□□□□□ -2.27
ECM9	YKR004C	LSM7	P53905	115 aa	Known RBP	0.88	□□□□□ -2.27
ECM9	YKR004C	COG5	P53951	403 aa		0.88	□□□□□ -2.27
ECM9	YKR004C	FAS1	P07149	2051 aa	Known RBP	0.88	□□□□□ -2.27
ECM9	YKR004C	SLH1	P53327	1967 aa	Known RBP	0.87	□□□□□ -2.27
ECM9	YKR004C	YDR157W	A0A023PZE8	133 aa		0.87	□□□□□ -2.27
ECM9	YKR004C	RPL25	P04456	142 aa	Known RBP	0.87	□□□□□ -2.27
ECM9	YKR004C	SPO13	P23624	291 aa		0.87	□□□□□ -2.27
ECM9	YKR004C	HYR1	P40581	163 aa	Known RBP	0.87	□□□□□ -2.27
ECM9	YKR004C	YRB1	P41920	201 aa	Known RBP	0.87	□□□□□ -2.27
ECM9	YKR004C	YPR174C	Q06616	221 aa	Predicted RBP	0.87	□□□□□ -2.27
ECM9	YKR004C	YNG1	Q08465	219 aa		0.87	□□□□□ -2.27
ECM9	YKR004C	MDM35	O60200	86 aa		0.86	□□□□□ -2.27
ECM9	YKR004C	MER1	P16523	270 aa		0.86	□□□□□ -2.27
ECM9	YKR004C	MAG1	P22134	296 aa	Known RBP	0.86	□□□□□ -2.27
ECM9	YKR004C	SPS18	P32572	300 aa		0.86	□□□□□ -2.27
ECM9	YKR004C	RAD17	P48581	401 aa		0.86	□□□□□ -2.27
ECM9	YKR004C	YRA1	Q12159	226 aa	Known RBP	0.86	□□□□□ -2.27
ECM9	YKR004C	POR1	P04840	283 aa	Known RBP	0.85	□□□□□ -2.27
ECM9	YKR004C	STE18	P18852	110 aa		0.85	□□□□□ -2.27
ECM9	YKR004C	YFH7	P43591	353 aa		0.85	□□□□□ -2.27
ECM9	YKR004C	IKI3	Q06706	1349 aa	Known RBP	0.85	□□□□□ -2.27
ECM9	YKR004C	COQ1	P18900	473 aa		0.84	□□□□□ -2.27
ECM9	YKR004C	PRP18	P33411	251 aa	Predicted RBP	0.84	□□□□□ -2.27
ECM9	YKR004C	TRM5	P38793	499 aa		0.84	□□□□□ -2.27
ECM9	YKR004C	HMF1	P40037	129 aa	Known RBP	0.84	□□□□□ -2.27
ECM9	YKR004C	CWC23	P52868	283 aa	Predicted RBP	0.84	□□□□□ -2.27
ECM9	YKR004C	HNT1	Q04344	158 aa	Known RBP	0.84	□□□□□ -2.27
ECM9	YKR004C	DGA1	Q08650	418 aa		0.84	□□□□□ -2.27
ECM9	YKR004C	MDM32	Q12171	622 aa		0.84	□□□□□ -2.27
ECM9	YKR004C	ODC2	Q99297	307 aa		0.84	□□□□□ -2.27
ECM9	YKR004C	AIM36	Q03798	255 aa		0.83	□□□□□ -2.28
ECM9	YKR004C	YMR252C	Q04814	134 aa		0.83	□□□□□ -2.28
ECM9	YKR004C	NCB2	Q92317	146 aa		0.83	□□□□□ -2.28
ECM9	YKR004C	CDC33	P07260	213 aa	Known RBP	0.82	□□□□□ -2.28
ECM9	YKR004C	YCL042W	P25572	119 aa		0.82	□□□□□ -2.28
ECM9	YKR004C	PAN3	P36102	679 aa	Predicted RBP	0.82	□□□□□ -2.28
ECM9	YKR004C	GET1	P53192	235 aa		0.82	□□□□□ -2.28
ECM9	YKR004C	OCH1	P31755	480 aa		0.81	□□□□□ -2.28
ECM9	YKR004C	ECM4	P36156	370 aa		0.81	□□□□□ -2.28
ECM9	YKR004C	YCR087C-A	P37263	153 aa		0.81	□□□□□ -2.28
ECM9	YKR004C	YHL018W	P38744	120 aa	Predicted RBP	0.81	□□□□□ -2.28
ECM9	YKR004C	YEL008W	P40001	126 aa		0.81	□□□□□ -2.28
ECM9	YKR004C	MSS2	P40990	351 aa		0.81	□□□□□ -2.28
ECM9	YKR004C	ERG10	P41338	398 aa	Known RBP	0.81	□□□□□ -2.28
ECM9	YKR004C	AIM25	P47140	327 aa		0.81	□□□□□ -2.28
ECM9	YKR004C	PRP8	P33334	2413 aa	Known RBP	0.8	□□□□□ -2.28
ECM9	YKR004C	ARG80	P07249	177 aa		0.79	□□□□□ -2.28
ECM9	YKR004C	YCR090C	P25654	182 aa	Known RBP	0.79	□□□□□ -2.28
ECM9	YKR004C	TAF14	P35189	244 aa		0.79	□□□□□ -2.28
ECM9	YKR004C	YEA4	P40004	342 aa		0.79	□□□□□ -2.28
ECM9	YKR004C	GGA1	Q06336	557 aa		0.79	□□□□□ -2.28
ECM9	YKR004C	IRC23	Q08416	157 aa		0.79	□□□□□ -2.28
ECM9	YKR004C	FIT2	Q08906	153 aa		0.79	□□□□□ -2.28
ECM9	YKR004C	HPA3	P39979	161 aa		0.78	□□□□□ -2.28
ECM9	YKR004C	DAD4	P69851	72 aa		0.78	□□□□□ -2.28
ECM9	YKR004C	YMR099C	Q03161	297 aa	Known RBP	0.78	□□□□□ -2.28
ECM9	YKR004C	RNH202	Q05635	350 aa		0.78	□□□□□ -2.28
ECM9	YKR004C	PRP11	Q07350	266 aa	Predicted RBP	0.78	□□□□□ -2.28
ECM9	YKR004C	COX8	P04039	78 aa		0.77	□□□□□ -2.29
ECM9	YKR004C	IKI1	P38874	309 aa		0.77	□□□□□ -2.29
ECM9	YKR004C	SER2	P42941	309 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms