RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W SUE1Q06524 206 aa2.67□□□□□ -1.98
CTK1YKL139W MHT1Q12525 324 aa2.67□□□□□ -1.98
CTK1YKL139W YDL085C-AQ3E7B7 68 aaKnown RBP2.67□□□□□ -1.98
CTK1YKL139W PRM10P42946 383 aa2.66□□□□□ -1.98
CTK1YKL139W ARP3P47117 449 aaKnown RBP2.66□□□□□ -1.98
CTK1YKL139W ARO8P53090 500 aaKnown RBP2.66□□□□□ -1.98
CTK1YKL139W JAC1P53193 184 aa2.66□□□□□ -1.98
CTK1YKL139W YNL247WP53852 767 aaKnown RBP2.66□□□□□ -1.98
CTK1YKL139W YMR315WQ04869 349 aaKnown RBP2.66□□□□□ -1.98
CTK1YKL139W RIO1Q12196 484 aaKnown RBP2.66□□□□□ -1.98
CTK1YKL139W FKS1P38631 1876 aaKnown RBP2.66□□□□□ -1.98
CTK1YKL139W YIL177CP40434 1758 aa2.66□□□□□ -1.98
CTK1YKL139W YJL225CP40889 1758 aa2.66□□□□□ -1.98
CTK1YKL139W TIM9O74700 87 aa2.66□□□□□ -1.98
CTK1YKL139W PET9P18239 318 aaKnown RBP2.66□□□□□ -1.98
CTK1YKL139W CLG1P35190 452 aa2.66□□□□□ -1.98
CTK1YKL139W MED6P38782 295 aa2.66□□□□□ -1.98
CTK1YKL139W YHR180WP38868 163 aa2.66□□□□□ -1.98
CTK1YKL139W NEJ1Q06148 342 aa2.66□□□□□ -1.98
CTK1YKL139W VPS68Q12016 184 aa2.66□□□□□ -1.98
CTK1YKL139W YOR283WQ12040 230 aaKnown RBP2.66□□□□□ -1.98
CTK1YKL139W TSC3Q3E790 80 aa2.66□□□□□ -1.98
CTK1YKL139W FAB1P34756 2278 aa2.65□□□□□ -1.98
CTK1YKL139W CKS1P20486 150 aaKnown RBP2.65□□□□□ -1.99
CTK1YKL139W ATP15P21306 62 aa2.65□□□□□ -1.99
CTK1YKL139W MGT1P26188 188 aa2.65□□□□□ -1.99
CTK1YKL139W MRPL17P36528 281 aa2.65□□□□□ -1.99
CTK1YKL139W MAK5P38112 773 aaPredicted RBP2.65□□□□□ -1.99
CTK1YKL139W YKE4P40544 346 aa2.65□□□□□ -1.99
CTK1YKL139W COS6P53344 381 aa2.65□□□□□ -1.99
CTK1YKL139W HNT1Q04344 158 aaKnown RBP2.65□□□□□ -1.99
CTK1YKL139W ATO3Q12359 275 aa2.65□□□□□ -1.99
CTK1YKL139W RPS24AP0CX31 135 aaKnown RBP2.64□□□□□ -1.99
CTK1YKL139W RPS24BP0CX32 135 aaKnown RBP2.64□□□□□ -1.99
CTK1YKL139W YJR111CP47148 283 aaKnown RBP2.64□□□□□ -1.99
CTK1YKL139W EFM5P53200 248 aaKnown RBP2.64□□□□□ -1.99
CTK1YKL139W MIX17Q03667 156 aa2.64□□□□□ -1.99
CTK1YKL139W HRT1Q08273 121 aa2.64□□□□□ -1.99
CTK1YKL139W DGA1Q08650 418 aa2.64□□□□□ -1.99
CTK1YKL139W FES1P38260 290 aa2.63□□□□□ -1.99
CTK1YKL139W PGD1P40356 397 aa2.63□□□□□ -1.99
CTK1YKL139W AIM34Q03673 198 aa2.63□□□□□ -1.99
CTK1YKL139W MRPS28P21771 286 aa2.62□□□□□ -1.99
CTK1YKL139W AHC2P25649 128 aa2.62□□□□□ -1.99
CTK1YKL139W ARO7P32178 256 aa2.62□□□□□ -1.99
CTK1YKL139W NVJ1P38881 321 aa2.62□□□□□ -1.99
CTK1YKL139W LSM4P40070 187 aaKnown RBP2.62□□□□□ -1.99
CTK1YKL139W FMP32P43557 207 aa2.62□□□□□ -1.99
CTK1YKL139W SKI6P46948 246 aaPredicted RBP2.62□□□□□ -1.99
CTK1YKL139W YGR219WP53307 113 aa2.62□□□□□ -1.99
CTK1YKL139W YDR274CP87283 123 aa2.62□□□□□ -1.99
CTK1YKL139W YLR031WQ07978 186 aa2.62□□□□□ -1.99
CTK1YKL139W QCR2P07257 368 aa2.61□□□□□ -1.99
CTK1YKL139W MEI4P29467 408 aa2.61□□□□□ -1.99
CTK1YKL139W CLB6P32943 380 aa2.61□□□□□ -1.99
CTK1YKL139W AME1P38313 324 aa2.61□□□□□ -1.99
CTK1YKL139W GVP36P40531 326 aaKnown RBP2.61□□□□□ -1.99
CTK1YKL139W SHH4Q06236 168 aa2.61□□□□□ -1.99
CTK1YKL139W YLR050CQ12155 161 aaKnown RBP2.61□□□□□ -1.99
CTK1YKL139W PEX11Q12462 236 aa2.61□□□□□ -1.99
CTK1YKL139W OCH1P31755 480 aa2.61□□□□□ -1.99
CTK1YKL139W FMP23P38231 175 aa2.61□□□□□ -1.99
CTK1YKL139W AIM2P39721 246 aa2.61□□□□□ -1.99
CTK1YKL139W CIS3P47001 227 aa2.61□□□□□ -1.99
CTK1YKL139W SEC14P24280 304 aaKnown RBP2.6□□□□□ -1.99
CTK1YKL139W MDH3P32419 343 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
CTK1YKL139W OPY1P38271 328 aa2.6□□□□□ -1.99
CTK1YKL139W MRPS8Q03799 155 aa2.6□□□□□ -1.99
CTK1YKL139W UMP1P38293 148 aa2.59□□□□□ -1.99
CTK1YKL139W SER2P42941 309 aa2.59□□□□□ -1.99
CTK1YKL139W EAF6P47128 113 aa2.59□□□□□ -1.99
CTK1YKL139W PGA1P53896 198 aa2.59□□□□□ -1.99
CTK1YKL139W YOL014WQ08110 124 aa2.59□□□□□ -1.99
CTK1YKL139W EMC6Q12431 108 aa2.59□□□□□ -1.99
CTK1YKL139W UBC6P33296 250 aaPredicted RBP2.58□□□□□ -2
CTK1YKL139W YKL102CP34249 101 aa2.58□□□□□ -2
CTK1YKL139W YOR062CP36025 268 aa2.58□□□□□ -2
CTK1YKL139W YEA4P40004 342 aa2.58□□□□□ -2
CTK1YKL139W RPL33BP41056 107 aaKnown RBP2.58□□□□□ -2
CTK1YKL139W DOC1P53068 250 aa2.58□□□□□ -2
CTK1YKL139W YNR062CP53748 327 aa2.58□□□□□ -2
CTK1YKL139W GPI17Q04080 534 aa2.58□□□□□ -2
CTK1YKL139W MPD1Q12404 318 aaKnown RBP2.58□□□□□ -2
CTK1YKL139W YPR014CQ6B0W2 109 aa2.58□□□□□ -2
CTK1YKL139W MON2P48563 1636 aaPredicted RBP2.58□□□□□ -2
CTK1YKL139W PEX4P29340 183 aa2.57□□□□□ -2
CTK1YKL139W SNC2P33328 115 aa2.57□□□□□ -2
CTK1YKL139W ERV15P38312 142 aa2.57□□□□□ -2
CTK1YKL139W HPT1Q04178 221 aaKnown RBP2.57□□□□□ -2
CTK1YKL139W YML100W-AQ8TGT0 57 aa2.57□□□□□ -2
CTK1YKL139W UTR5P32630 166 aa2.57□□□□□ -2
CTK1YKL139W PAN3P36102 679 aaPredicted RBP2.57□□□□□ -2
CTK1YKL139W YBR285WP38354 144 aa2.57□□□□□ -2
CTK1YKL139W AVT2P39981 480 aa2.57□□□□□ -2
CTK1YKL139W YJL027CP47063 138 aaPredicted RBP2.57□□□□□ -2
CTK1YKL139W TDA4P47153 279 aa2.57□□□□□ -2
CTK1YKL139W YGL235WP53071 178 aa2.57□□□□□ -2
CTK1YKL139W YNR077CP53758 84 aa2.57□□□□□ -2
CTK1YKL139W NUP49Q02199 472 aa2.57□□□□□ -2
CTK1YKL139W YET1P35723 206 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms