RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	OXA1	P39952	402 aa		4.68	□□□□□ -1.66
RRN3	YKL125W	TES1	P41903	349 aa	Known RBP	4.68	□□□□□ -1.66
RRN3	YKL125W	YJL028W	P47062	111 aa		4.68	□□□□□ -1.66
RRN3	YKL125W	MTM1	P53320	366 aa		4.68	□□□□□ -1.66
RRN3	YKL125W	RTT102	P53330	157 aa		4.68	□□□□□ -1.66
RRN3	YKL125W	YPR114W	Q06107	315 aa		4.68	□□□□□ -1.66
RRN3	YKL125W	MCP1	Q12106	302 aa		4.68	□□□□□ -1.66
RRN3	YKL125W	YRA1	Q12159	226 aa	Known RBP	4.68	□□□□□ -1.66
RRN3	YKL125W	MCT1	Q12283	360 aa		4.68	□□□□□ -1.66
RRN3	YKL125W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.68	□□□□□ -1.66
RRN3	YKL125W	POR1	P04840	283 aa	Known RBP	4.67	□□□□□ -1.66
RRN3	YKL125W	HEM2	P05373	342 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	SEC4	P07560	215 aa	Known RBP	4.67	□□□□□ -1.66
RRN3	YKL125W	RPL1A	P0CX43	217 aa	Known RBP	4.67	□□□□□ -1.66
RRN3	YKL125W	RPL1B	P0CX44	217 aa	Known RBP	4.67	□□□□□ -1.66
RRN3	YKL125W	PCL1	P24867	279 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	LRE1	P25579	583 aa	Known RBP	4.67	□□□□□ -1.66
RRN3	YKL125W	SKN1	P33336	771 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	PAU16	P35994	123 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	PAU24	P38155	120 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	UMP1	P38293	148 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	PEX7	P39108	375 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	YND1	P40009	630 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	YFL065C	P43539	102 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	YFL054C	P43549	646 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	SFH5	P47008	294 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	ERG26	P53199	349 aa	Known RBP	4.67	□□□□□ -1.66
RRN3	YKL125W	SUR7	P54003	302 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	HHT1	P61830	136 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	YPR203W	Q08994	102 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	FCY22	Q12119	530 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	PER33	Q12144	273 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	ICT1	Q12385	394 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	IZH2	Q12442	317 aa		4.67	□□□□□ -1.66
RRN3	YKL125W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.67	□□□□□ -1.66
RRN3	YKL125W	YKU70	P32807	602 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	MCR1	P36060	302 aa	Known RBP	4.66	□□□□□ -1.66
RRN3	YKL125W	MIC12	P38341	106 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	RPL14B	P38754	138 aa	Known RBP	4.66	□□□□□ -1.66
RRN3	YKL125W	TRR2	P38816	342 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YER076C	P40049	302 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YJR096W	P47137	282 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	TTI2	P47168	421 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	MTC3	P53077	123 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	DUG3	P53871	357 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	TIM10	P87108	93 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YMR210W	Q03649	449 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YMR166C	Q03829	368 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	THI74	Q04083	370 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	ASM4	Q05166	528 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YOR015W	Q12169	119 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YRF1-3	P0CX14	1859 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YRF1-7	P0CX15	1859 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YRF1-6	P53819	1859 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	SOD2	P00447	233 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	CYC3	P06182	269 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	STE7	P06784	515 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	GAS1	P22146	559 aa	Known RBP	4.66	□□□□□ -1.66
RRN3	YKL125W	YMC1	P32331	307 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	RAD23	P32628	398 aa	Known RBP	4.66	□□□□□ -1.66
RRN3	YKL125W	FLO5	P38894	1075 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	UBX6	P47049	396 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	BOL2	P53082	120 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	PDR17	P53844	350 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	APS2	Q00381	147 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	SNP1	Q00916	300 aa	Predicted RBP	4.66	□□□□□ -1.66
RRN3	YKL125W	UBC7	Q02159	165 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	ELP6	Q04868	273 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	PFA4	Q12006	378 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YPL229W	Q99395	206 aa		4.66	□□□□□ -1.66
RRN3	YKL125W	YER039C-A	P0CD97	72 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	YKR104W	P0CE69	306 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	SCO1	P23833	295 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	YCR007C	P25354	239 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
RRN3	YKL125W	PPZ2	P33329	710 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	ADH5	P38113	351 aa	Known RBP	4.65	□□□□□ -1.66
RRN3	YKL125W	YER134C	P40081	178 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	MEP2	P41948	499 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	SNO3	P43544	222 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	SCS3	P53012	380 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	PAU12	P53343	120 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	TRM112	P53738	135 aa	Predicted RBP	4.65	□□□□□ -1.66
RRN3	YKL125W	SNO2	P53823	222 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	MRPL1	Q04599	285 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	BLS1	Q06071	122 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	NMA1	Q06178	401 aa	Known RBP	4.65	□□□□□ -1.66
RRN3	YKL125W	TAZ1	Q06510	381 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	MRH1	Q12117	320 aa	Predicted RBP	4.65	□□□□□ -1.66
RRN3	YKL125W	ORT1	Q12375	292 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	YLR146W-A	Q2V2P1	62 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	FLO1	P32768	1537 aa		4.65	□□□□□ -1.66
RRN3	YKL125W	LAA1	P39526	2014 aa		4.65	□□□□□ -1.67
RRN3	YKL125W	YBR121C-A	P0C5L4	52 aa		4.64	□□□□□ -1.67
RRN3	YKL125W	PPA2	P28239	310 aa		4.64	□□□□□ -1.67
RRN3	YKL125W	PRP18	P33411	251 aa	Predicted RBP	4.64	□□□□□ -1.67
RRN3	YKL125W	SDS24	P38314	527 aa		4.64	□□□□□ -1.67
RRN3	YKL125W	HSP10	P38910	106 aa		4.64	□□□□□ -1.67
RRN3	YKL125W	DLS1	P40366	167 aa		4.64	□□□□□ -1.67
RRN3	YKL125W	YOL024W	Q08172	172 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms