RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W YOR352WQ08816 343 aa5.09□□□□□ -1.59
MDH1YKL085W YLR099W-AQ3E798 87 aa5.09□□□□□ -1.59
MDH1YKL085W AHC2P25649 128 aa5.08□□□□□ -1.6
MDH1YKL085W RAD23P32628 398 aaKnown RBP5.08□□□□□ -1.6
MDH1YKL085W YBL010CP32788 280 aa5.08□□□□□ -1.6
MDH1YKL085W YKR045CP36138 183 aa5.08□□□□□ -1.6
MDH1YKL085W NVJ1P38881 321 aa5.08□□□□□ -1.6
MDH1YKL085W GLO1P50107 326 aa5.08□□□□□ -1.6
MDH1YKL085W MGR3Q04472 501 aa5.08□□□□□ -1.6
MDH1YKL085W SCW10Q04951 389 aa5.08□□□□□ -1.6
MDH1YKL085W PRM3Q08931 133 aa5.08□□□□□ -1.6
MDH1YKL085W AEP3Q12089 606 aa5.08□□□□□ -1.6
MDH1YKL085W CYC7P00045 113 aa5.07□□□□□ -1.6
MDH1YKL085W TDH1P00360 332 aaKnown RBP5.07□□□□□ -1.6
MDH1YKL085W GCN3P14741 305 aa5.07□□□□□ -1.6
MDH1YKL085W SDH4P37298 181 aa5.07□□□□□ -1.6
MDH1YKL085W YBR137WP38276 179 aa5.07□□□□□ -1.6
MDH1YKL085W PHM8P40025 321 aa5.07□□□□□ -1.6
MDH1YKL085W FCY21P40039 528 aa5.07□□□□□ -1.6
MDH1YKL085W PRM5P40476 318 aa5.07□□□□□ -1.6
MDH1YKL085W GPI14P47088 403 aaKnown RBP5.07□□□□□ -1.6
MDH1YKL085W RPL9BP51401 191 aaKnown RBP5.07□□□□□ -1.6
MDH1YKL085W DOC1P53068 250 aa5.07□□□□□ -1.6
MDH1YKL085W ACT1P60010 375 aaKnown RBP5.07□□□□□ -1.6
MDH1YKL085W DGK1Q12382 290 aa5.07□□□□□ -1.6
MDH1YKL085W YOS1Q3E834 85 aa5.07□□□□□ -1.6
MDH1YKL085W QCR7P00128 127 aa5.06□□□□□ -1.6
MDH1YKL085W RFA3P26755 122 aaKnown RBP5.06□□□□□ -1.6
MDH1YKL085W VMA5P31412 392 aaKnown RBP5.06□□□□□ -1.6
MDH1YKL085W RPB7P34087 171 aa5.06□□□□□ -1.6
MDH1YKL085W BXI1P48558 297 aa5.06□□□□□ -1.6
MDH1YKL085W DIE2P50076 525 aa5.06□□□□□ -1.6
MDH1YKL085W GRH1Q04410 372 aaKnown RBP5.06□□□□□ -1.6
MDH1YKL085W SWT1Q12104 458 aa5.06□□□□□ -1.6
MDH1YKL085W DCP1Q12517 231 aaPredicted RBP5.06□□□□□ -1.6
MDH1YKL085W YEL009C-AA0A023PZF2 135 aa5.05□□□□□ -1.6
MDH1YKL085W RPN13O13563 156 aa5.05□□□□□ -1.6
MDH1YKL085W MRS4P23500 304 aa5.05□□□□□ -1.6
MDH1YKL085W UTP30P36144 274 aaKnown RBP5.05□□□□□ -1.6
MDH1YKL085W YHK8P38776 514 aa5.05□□□□□ -1.6
MDH1YKL085W IKI1P38874 309 aa5.05□□□□□ -1.6
MDH1YKL085W IMD3P50095 523 aaKnown RBP5.05□□□□□ -1.6
MDH1YKL085W SOL1P50278 321 aa5.05□□□□□ -1.6
MDH1YKL085W TOS8P53147 276 aa5.05□□□□□ -1.6
MDH1YKL085W FMP48P53233 369 aa5.05□□□□□ -1.6
MDH1YKL085W PEX10Q05568 337 aa5.05□□□□□ -1.6
MDH1YKL085W MSC3Q05812 728 aa5.05□□□□□ -1.6
MDH1YKL085W RXT3Q07458 294 aa5.05□□□□□ -1.6
MDH1YKL085W TIR4Q12218 487 aaPredicted RBP5.05□□□□□ -1.6
MDH1YKL085W RBD2Q12270 262 aa5.05□□□□□ -1.6
MDH1YKL085W FUS3P16892 353 aaKnown RBP5.04□□□□□ -1.6
MDH1YKL085W ERV1P27882 189 aa5.04□□□□□ -1.6
MDH1YKL085W MSS1P32559 526 aaPredicted RBP5.04□□□□□ -1.6
MDH1YKL085W YKL075CP36083 450 aa5.04□□□□□ -1.6
MDH1YKL085W POP2P39008 433 aa5.04□□□□□ -1.6
MDH1YKL085W SSO2P39926 295 aa5.04□□□□□ -1.6
MDH1YKL085W YIL060WP40519 144 aa5.04□□□□□ -1.6
MDH1YKL085W IMO32P53219 342 aa5.04□□□□□ -1.6
MDH1YKL085W CAB4P53332 305 aa5.04□□□□□ -1.6
MDH1YKL085W CWC25P53854 179 aaKnown RBP5.04□□□□□ -1.6
MDH1YKL085W CTF19Q02732 369 aa5.04□□□□□ -1.6
MDH1YKL085W YOL029CQ08187 201 aa5.04□□□□□ -1.6
MDH1YKL085W AAC1P04710 309 aa5.03□□□□□ -1.6
MDH1YKL085W LSB5P25369 354 aa5.03□□□□□ -1.6
MDH1YKL085W SYS1P41544 203 aa5.03□□□□□ -1.6
MDH1YKL085W YJL163CP46996 555 aa5.03□□□□□ -1.6
MDH1YKL085W YAE1P47118 141 aaPredicted RBP5.03□□□□□ -1.6
MDH1YKL085W ARO8P53090 500 aaKnown RBP5.03□□□□□ -1.6
MDH1YKL085W HNT1Q04344 158 aaKnown RBP5.03□□□□□ -1.6
MDH1YKL085W NDE2Q07500 545 aa5.03□□□□□ -1.6
MDH1YKL085W YOR292CQ08743 309 aa5.03□□□□□ -1.6
MDH1YKL085W YJR112W-AQ3E743 109 aa5.03□□□□□ -1.6
MDH1YKL085W HIS3P06633 220 aa5.02□□□□□ -1.61
MDH1YKL085W RPL24BP24000 155 aaKnown RBP5.02□□□□□ -1.61
MDH1YKL085W IFM1P25038 676 aa5.02□□□□□ -1.61
MDH1YKL085W GPX2P38143 162 aa5.02□□□□□ -1.61
MDH1YKL085W RTT105P40063 208 aa5.02□□□□□ -1.61
MDH1YKL085W COX15P40086 486 aa5.02□□□□□ -1.61
MDH1YKL085W MRPL49P40858 161 aaPredicted RBP5.02□□□□□ -1.61
MDH1YKL085W BNA6P43619 295 aa5.02□□□□□ -1.61
MDH1YKL085W ECM27P47144 725 aa5.02□□□□□ -1.61
MDH1YKL085W SLX9P53251 210 aaPredicted RBP5.02□□□□□ -1.61
MDH1YKL085W ALG9P53868 555 aaKnown RBP5.02□□□□□ -1.61
MDH1YKL085W MRPL22P53881 309 aa5.02□□□□□ -1.61
MDH1YKL085W MAK3Q03503 176 aa5.02□□□□□ -1.61
MDH1YKL085W LPP1Q04396 274 aa5.02□□□□□ -1.61
MDH1YKL085W DPB4Q04603 196 aaKnown RBP5.02□□□□□ -1.61
MDH1YKL085W YLR224WQ05947 369 aa5.02□□□□□ -1.61
MDH1YKL085W PBP4Q07362 185 aaKnown RBP5.02□□□□□ -1.61
MDH1YKL085W IZH3Q07959 543 aa5.02□□□□□ -1.61
MDH1YKL085W YPL199CQ08954 240 aa5.02□□□□□ -1.61
MDH1YKL085W YPR053CQ6Q5F3 151 aa5.02□□□□□ -1.61
MDH1YKL085W ODC2Q99297 307 aa5.02□□□□□ -1.61
MDH1YKL085W CAP2P13517 287 aa5.01□□□□□ -1.61
MDH1YKL085W SHE2P36068 246 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
MDH1YKL085W MBA1P38300 278 aa5.01□□□□□ -1.61
MDH1YKL085W SMB1P40018 196 aaKnown RBP5.01□□□□□ -1.61
MDH1YKL085W YJL218WP40892 196 aaKnown RBP5.01□□□□□ -1.61
MDH1YKL085W CPR8P53728 308 aa5.01□□□□□ -1.61
MDH1YKL085W YPR108W-AQ3E7B3 70 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms