RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C INP53Q12271 1107 aa2.89□□□□□ -1.95
VPS53YJL029C MED4Q12343 284 aa2.89□□□□□ -1.95
VPS53YJL029C YPR108W-AQ3E7B3 70 aa2.89□□□□□ -1.95
VPS53YJL029C ODC2Q99297 307 aa2.89□□□□□ -1.95
VPS53YJL029C RPS18AP0CX55 146 aaKnown RBP2.88□□□□□ -1.95
VPS53YJL029C RPS18BP0CX56 146 aaPredicted RBP2.88□□□□□ -1.95
VPS53YJL029C YBL010CP32788 280 aa2.88□□□□□ -1.95
VPS53YJL029C ICS2P38284 255 aa2.88□□□□□ -1.95
VPS53YJL029C POP2P39008 433 aa2.88□□□□□ -1.95
VPS53YJL029C YGR042WP53227 271 aa2.88□□□□□ -1.95
VPS53YJL029C ERV29P53337 310 aa2.88□□□□□ -1.95
VPS53YJL029C SPG4Q04438 115 aa2.88□□□□□ -1.95
VPS53YJL029C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
VPS53YJL029C YOR283WQ12040 230 aaKnown RBP2.88□□□□□ -1.95
VPS53YJL029C DCP1Q12517 231 aaPredicted RBP2.88□□□□□ -1.95
VPS53YJL029C FRS1P15624 595 aaKnown RBP2.88□□□□□ -1.95
VPS53YJL029C INO2P26798 304 aa2.88□□□□□ -1.95
VPS53YJL029C TRR1P29509 319 aaKnown RBP2.88□□□□□ -1.95
VPS53YJL029C UTP11P34247 250 aaPredicted RBP2.88□□□□□ -1.95
VPS53YJL029C PRS4P38063 326 aaPredicted RBP2.88□□□□□ -1.95
VPS53YJL029C LAG1P38703 411 aa2.88□□□□□ -1.95
VPS53YJL029C YIL060WP40519 144 aa2.88□□□□□ -1.95
VPS53YJL029C YDL186WP48568 277 aa2.88□□□□□ -1.95
VPS53YJL029C APJ1P53940 528 aa2.88□□□□□ -1.95
VPS53YJL029C LPP1Q04396 274 aa2.88□□□□□ -1.95
VPS53YJL029C DPB4Q04603 196 aaKnown RBP2.88□□□□□ -1.95
VPS53YJL029C CKA1P15790 372 aa2.87□□□□□ -1.95
VPS53YJL029C CDC23P16522 626 aa2.87□□□□□ -1.95
VPS53YJL029C MIR1P23641 311 aaKnown RBP2.87□□□□□ -1.95
VPS53YJL029C YCR061WP25639 631 aa2.87□□□□□ -1.95
VPS53YJL029C FMT1P32785 401 aa2.87□□□□□ -1.95
VPS53YJL029C HTD2P38790 280 aaKnown RBP2.87□□□□□ -1.95
VPS53YJL029C OTU1P43558 301 aa2.87□□□□□ -1.95
VPS53YJL029C YJR011CP47086 261 aaPredicted RBP2.87□□□□□ -1.95
VPS53YJL029C SRB7P47822 140 aa2.87□□□□□ -1.95
VPS53YJL029C TPN1P53099 579 aa2.87□□□□□ -1.95
VPS53YJL029C BOL1Q3E793 110 aa2.87□□□□□ -1.95
VPS53YJL029C UBA3Q99344 299 aa2.87□□□□□ -1.95
VPS53YJL029C CYC1P00044 109 aaPredicted RBP2.87□□□□□ -1.95
VPS53YJL029C RPS8AP0CX39 200 aaKnown RBP2.87□□□□□ -1.95
VPS53YJL029C RPS8BP0CX40 200 aaKnown RBP2.87□□□□□ -1.95
VPS53YJL029C BUD23P25627 275 aaPredicted RBP2.87□□□□□ -1.95
VPS53YJL029C RAD23P32628 398 aaKnown RBP2.87□□□□□ -1.95
VPS53YJL029C YHK8P38776 514 aa2.87□□□□□ -1.95
VPS53YJL029C SLX9P53251 210 aaPredicted RBP2.87□□□□□ -1.95
VPS53YJL029C MGR3Q04472 501 aa2.87□□□□□ -1.95
VPS53YJL029C TRI1Q05024 226 aa2.87□□□□□ -1.95
VPS53YJL029C SYM1Q06563 197 aa2.87□□□□□ -1.95
VPS53YJL029C PET20Q99373 253 aa2.87□□□□□ -1.95
VPS53YJL029C VPS63O13549 108 aa2.86□□□□□ -1.95
VPS53YJL029C RPL9AP05738 191 aaKnown RBP2.86□□□□□ -1.95
VPS53YJL029C ROX3P25046 220 aa2.86□□□□□ -1.95
VPS53YJL029C PHM8P40025 321 aa2.86□□□□□ -1.95
VPS53YJL029C GET2P40056 285 aa2.86□□□□□ -1.95
VPS53YJL029C YJL163CP46996 555 aa2.86□□□□□ -1.95
VPS53YJL029C YJR056CP47115 236 aa2.86□□□□□ -1.95
VPS53YJL029C RPL9BP51401 191 aaKnown RBP2.86□□□□□ -1.95
VPS53YJL029C FMP48P53233 369 aa2.86□□□□□ -1.95
VPS53YJL029C ALG9P53868 555 aaKnown RBP2.86□□□□□ -1.95
VPS53YJL029C BUD25P85052 153 aa2.86□□□□□ -1.95
VPS53YJL029C YDL086WQ07505 273 aa2.86□□□□□ -1.95
VPS53YJL029C SCP1Q08873 200 aa2.86□□□□□ -1.95
VPS53YJL029C MRPL23Q12487 163 aaPredicted RBP2.86□□□□□ -1.95
VPS53YJL029C YHR138CP38841 114 aaPredicted RBP2.86□□□□□ -1.95
VPS53YJL029C IRC18P47056 224 aa2.86□□□□□ -1.95
VPS53YJL029C YGL262WP53054 175 aa2.86□□□□□ -1.95
VPS53YJL029C MEH1Q02205 184 aa2.86□□□□□ -1.95
VPS53YJL029C MCM21Q06675 368 aa2.86□□□□□ -1.95
VPS53YJL029C YPL199CQ08954 240 aa2.86□□□□□ -1.95
VPS53YJL029C RAD28Q12021 506 aa2.86□□□□□ -1.95
VPS53YJL029C RKI1Q12189 258 aa2.86□□□□□ -1.95
VPS53YJL029C ATG31Q12421 196 aa2.86□□□□□ -1.95
VPS53YJL029C YLR415CO13578 112 aa2.85□□□□□ -1.95
VPS53YJL029C ELO2P25358 347 aa2.85□□□□□ -1.95
VPS53YJL029C MIT1P40002 666 aa2.85□□□□□ -1.95
VPS53YJL029C YJL213WP40896 331 aa2.85□□□□□ -1.95
VPS53YJL029C SER2P42941 309 aa2.85□□□□□ -1.95
VPS53YJL029C YFL015CP43578 164 aa2.85□□□□□ -1.95
VPS53YJL029C GTF1P53260 183 aaPredicted RBP2.85□□□□□ -1.95
VPS53YJL029C YML018CQ03730 393 aa2.85□□□□□ -1.95
VPS53YJL029C YOR192C-CQ3E736 78 aa2.85□□□□□ -1.95
VPS53YJL029C COX2P00410 251 aa2.85□□□□□ -1.95
VPS53YJL029C SEN2P16658 377 aa2.85□□□□□ -1.95
VPS53YJL029C RNA14P25298 677 aaKnown RBP2.85□□□□□ -1.95
VPS53YJL029C SPT14P32363 452 aa2.85□□□□□ -1.95
VPS53YJL029C UTR5P32630 166 aa2.85□□□□□ -1.95
VPS53YJL029C RTC3P38804 111 aaPredicted RBP2.85□□□□□ -1.95
VPS53YJL029C YNL194CP40169 301 aa2.85□□□□□ -1.95
VPS53YJL029C CAT5P41735 233 aa2.85□□□□□ -1.95
VPS53YJL029C VPS55P47111 140 aa2.85□□□□□ -1.95
VPS53YJL029C RSM27P53305 110 aa2.85□□□□□ -1.95
VPS53YJL029C HOR7Q05827 59 aa2.85□□□□□ -1.95
VPS53YJL029C PRM3Q08931 133 aa2.85□□□□□ -1.95
VPS53YJL029C LAS17Q12446 633 aa2.85□□□□□ -1.95
VPS53YJL029C TRP4P07285 380 aaPredicted RBP2.84□□□□□ -1.95
VPS53YJL029C YLL053CP0CD98 152 aa2.84□□□□□ -1.95
VPS53YJL029C AGA2P32781 87 aa2.84□□□□□ -1.95
VPS53YJL029C YCR041WP37265 110 aa2.84□□□□□ -1.95
VPS53YJL029C YPC1P38298 316 aa2.84□□□□□ -1.95
VPS53YJL029C RPL13BP40212 199 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms