RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W TVP15Q03860 143 aa1.7□□□□□ -2.14
SSF1YHR066W EMI1Q04406 187 aa1.7□□□□□ -2.14
SSF1YHR066W YPR011CQ12251 326 aa1.7□□□□□ -2.14
SSF1YHR066W EMP46Q12396 444 aa1.7□□□□□ -2.14
SSF1YHR066W AGC1Q12482 902 aa1.7□□□□□ -2.14
SSF1YHR066W SWI1P09547 1314 aa1.7□□□□□ -2.14
SSF1YHR066W PUT1P09368 476 aa1.69□□□□□ -2.14
SSF1YHR066W GCY1P14065 312 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
SSF1YHR066W APS1P35181 156 aa1.69□□□□□ -2.14
SSF1YHR066W CAF4P36130 643 aa1.69□□□□□ -2.14
SSF1YHR066W TRM7P38238 310 aaKnown RBP1.69□□□□□ -2.14
SSF1YHR066W SSH1P38353 490 aaKnown RBP1.69□□□□□ -2.14
SSF1YHR066W YER188WP40103 239 aa1.69□□□□□ -2.14
SSF1YHR066W CAT5P41735 233 aa1.69□□□□□ -2.14
SSF1YHR066W PIR5P46999 287 aa1.69□□□□□ -2.14
SSF1YHR066W GTR2P53290 341 aa1.69□□□□□ -2.14
SSF1YHR066W SSU72P53538 206 aaPredicted RBP1.69□□□□□ -2.14
SSF1YHR066W ALG9P53868 555 aaKnown RBP1.69□□□□□ -2.14
SSF1YHR066W YLR460CP54007 376 aa1.69□□□□□ -2.14
SSF1YHR066W ARO80Q04052 950 aa1.69□□□□□ -2.14
SSF1YHR066W YML096WQ04489 525 aa1.69□□□□□ -2.14
SSF1YHR066W GRX8Q05926 109 aa1.69□□□□□ -2.14
SSF1YHR066W NOC4Q06512 552 aaPredicted RBP1.69□□□□□ -2.14
SSF1YHR066W TEL1P38110 2787 aa1.69□□□□□ -2.14
SSF1YHR066W ACC1Q00955 2233 aaKnown RBP1.68□□□□□ -2.14
SSF1YHR066W IPP1P00817 287 aaKnown RBP1.68□□□□□ -2.14
SSF1YHR066W HIS3P06633 220 aa1.68□□□□□ -2.14
SSF1YHR066W MRS1P07266 363 aa1.68□□□□□ -2.14
SSF1YHR066W ZWF1P11412 505 aaKnown RBP1.68□□□□□ -2.14
SSF1YHR066W TAH1P25638 111 aaPredicted RBP1.68□□□□□ -2.14
SSF1YHR066W TRR1P29509 319 aaKnown RBP1.68□□□□□ -2.14
SSF1YHR066W TCA17P32613 152 aa1.68□□□□□ -2.14
SSF1YHR066W TEM1P38987 245 aa1.68□□□□□ -2.14
SSF1YHR066W MTW1P39731 289 aa1.68□□□□□ -2.14
SSF1YHR066W YKE4P40544 346 aa1.68□□□□□ -2.14
SSF1YHR066W MRPL49P40858 161 aaPredicted RBP1.68□□□□□ -2.14
SSF1YHR066W ILM1P47155 203 aa1.68□□□□□ -2.14
SSF1YHR066W JAC1P53193 184 aa1.68□□□□□ -2.14
SSF1YHR066W ERV29P53337 310 aa1.68□□□□□ -2.14
SSF1YHR066W YLR179CQ06252 201 aaKnown RBP1.68□□□□□ -2.14
SSF1YHR066W GGA1Q06336 557 aa1.68□□□□□ -2.14
SSF1YHR066W SMT3Q12306 101 aaKnown RBP1.68□□□□□ -2.14
SSF1YHR066W YPL247CQ12523 523 aa1.68□□□□□ -2.14
SSF1YHR066W LSO2Q3E772 92 aaKnown RBP1.68□□□□□ -2.14
SSF1YHR066W YLR462WO13556 202 aa1.67□□□□□ -2.14
SSF1YHR066W QCR2P07257 368 aa1.67□□□□□ -2.14
SSF1YHR066W YKR041WP36134 250 aa1.67□□□□□ -2.14
SSF1YHR066W AME1P38313 324 aa1.67□□□□□ -2.14
SSF1YHR066W SPL2P38839 148 aa1.67□□□□□ -2.14
SSF1YHR066W YEL075CP39972 122 aa1.67□□□□□ -2.14
SSF1YHR066W MDM34P53083 459 aa1.67□□□□□ -2.14
SSF1YHR066W RSM27P53305 110 aa1.67□□□□□ -2.14
SSF1YHR066W RTC4P53850 401 aa1.67□□□□□ -2.14
SSF1YHR066W YNL247WP53852 767 aaKnown RBP1.67□□□□□ -2.14
SSF1YHR066W LSM7P53905 115 aaKnown RBP1.67□□□□□ -2.14
SSF1YHR066W DID2P69771 204 aa1.67□□□□□ -2.14
SSF1YHR066W RGM1Q00453 211 aa1.67□□□□□ -2.14
SSF1YHR066W INM2Q05533 292 aa1.67□□□□□ -2.14
SSF1YHR066W YLR030WQ07967 263 aa1.67□□□□□ -2.14
SSF1YHR066W YOL019WQ08157 551 aa1.67□□□□□ -2.14
SSF1YHR066W GRX2P17695 143 aaKnown RBP1.66□□□□□ -2.14
SSF1YHR066W SEC22P22214 214 aa1.66□□□□□ -2.14
SSF1YHR066W TOM40P23644 387 aaKnown RBP1.66□□□□□ -2.14
SSF1YHR066W BMH1P29311 267 aaKnown RBP1.66□□□□□ -2.14
SSF1YHR066W ACP1P32463 125 aa1.66□□□□□ -2.14
SSF1YHR066W SFC1P33303 322 aa1.66□□□□□ -2.14
SSF1YHR066W CLG1P35190 452 aa1.66□□□□□ -2.14
SSF1YHR066W YPT52P36018 234 aaKnown RBP1.66□□□□□ -2.14
SSF1YHR066W MSA2P36157 363 aa1.66□□□□□ -2.14
SSF1YHR066W MAK5P38112 773 aaPredicted RBP1.66□□□□□ -2.14
SSF1YHR066W DOG1P38774 246 aa1.66□□□□□ -2.14
SSF1YHR066W RPF1P38805 295 aaKnown RBP1.66□□□□□ -2.14
SSF1YHR066W RPA43P46669 326 aa1.66□□□□□ -2.14
SSF1YHR066W TMA22P47089 198 aaPredicted RBP1.66□□□□□ -2.14
SSF1YHR066W AIM25P47140 327 aa1.66□□□□□ -2.14
SSF1YHR066W UBC12P52491 188 aa1.66□□□□□ -2.14
SSF1YHR066W PRM8P53174 237 aa1.66□□□□□ -2.14
SSF1YHR066W YGR050CP53231 118 aa1.66□□□□□ -2.14
SSF1YHR066W YML108WQ03759 105 aa1.66□□□□□ -2.14
SSF1YHR066W YMR315WQ04869 349 aaKnown RBP1.66□□□□□ -2.14
SSF1YHR066W SLD7Q08457 257 aa1.66□□□□□ -2.14
SSF1YHR066W NIP7Q08962 181 aaKnown RBP1.66□□□□□ -2.14
SSF1YHR066W MDM32Q12171 622 aa1.66□□□□□ -2.14
SSF1YHR066W PST1Q12355 444 aa1.66□□□□□ -2.14
SSF1YHR066W NOT5Q12514 560 aaPredicted RBP1.66□□□□□ -2.14
SSF1YHR066W ISD11Q6Q560 94 aa1.66□□□□□ -2.14
SSF1YHR066W HTL1Q9URQ5 78 aa1.66□□□□□ -2.14
SSF1YHR066W RPO41P13433 1351 aaKnown RBP1.66□□□□□ -2.14
SSF1YHR066W RIF1P29539 1916 aa1.65□□□□□ -2.14
SSF1YHR066W DUR1,2P32528 1835 aaKnown RBP1.65□□□□□ -2.14
SSF1YHR066W YEL009C-AA0A023PZF2 135 aa1.65□□□□□ -2.15
SSF1YHR066W CDC7P06243 507 aa1.65□□□□□ -2.15
SSF1YHR066W MGT1P26188 188 aa1.65□□□□□ -2.15
SSF1YHR066W MEI4P29467 408 aa1.65□□□□□ -2.15
SSF1YHR066W RNP1P32385 249 aa1.65□□□□□ -2.15
SSF1YHR066W ERG24P32462 438 aaKnown RBP1.65□□□□□ -2.15
SSF1YHR066W PTM1P32857 523 aa1.65□□□□□ -2.15
SSF1YHR066W DOG2P38773 246 aa1.65□□□□□ -2.15
SSF1YHR066W YER076CP40049 302 aa1.65□□□□□ -2.15
SSF1YHR066W PDS1P40316 373 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 94.2 ms