RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W SRX1P36077 127 aa2.52□□□□□ -2.01
PTI1YGR156W YCR087C-AP37263 153 aa2.52□□□□□ -2.01
PTI1YGR156W MED6P38782 295 aa2.52□□□□□ -2.01
PTI1YGR156W RPF1P38805 295 aaKnown RBP2.52□□□□□ -2.01
PTI1YGR156W BMT5P40493 336 aa2.52□□□□□ -2.01
PTI1YGR156W YGL159WP53110 370 aa2.52□□□□□ -2.01
PTI1YGR156W GTR2P53290 341 aa2.52□□□□□ -2.01
PTI1YGR156W ERV29P53337 310 aa2.52□□□□□ -2.01
PTI1YGR156W NKP2Q06162 153 aa2.52□□□□□ -2.01
PTI1YGR156W YLR179CQ06252 201 aaKnown RBP2.52□□□□□ -2.01
PTI1YGR156W OAC1P32332 324 aa2.51□□□□□ -2.01
PTI1YGR156W ERG24P32462 438 aaKnown RBP2.51□□□□□ -2.01
PTI1YGR156W RCN1P36054 211 aa2.51□□□□□ -2.01
PTI1YGR156W MSA2P36157 363 aa2.51□□□□□ -2.01
PTI1YGR156W COS8P38723 381 aa2.51□□□□□ -2.01
PTI1YGR156W ILM1P47155 203 aa2.51□□□□□ -2.01
PTI1YGR156W BXI1P48558 297 aa2.51□□□□□ -2.01
PTI1YGR156W RMR1P53060 241 aa2.51□□□□□ -2.01
PTI1YGR156W YMR279CQ03263 540 aa2.51□□□□□ -2.01
PTI1YGR156W SMD2Q06217 110 aaKnown RBP2.51□□□□□ -2.01
PTI1YGR156W LSO2Q3E772 92 aaKnown RBP2.51□□□□□ -2.01
PTI1YGR156W HTL1Q9URQ5 78 aa2.51□□□□□ -2.01
PTI1YGR156W BEM2P39960 2167 aaKnown RBP2.5□□□□□ -2.01
PTI1YGR156W COX5AP00424 153 aa2.5□□□□□ -2.01
PTI1YGR156W IPP1P00817 287 aaKnown RBP2.5□□□□□ -2.01
PTI1YGR156W RAD10P06838 210 aa2.5□□□□□ -2.01
PTI1YGR156W DPM1P14020 267 aaKnown RBP2.5□□□□□ -2.01
PTI1YGR156W GCN3P14741 305 aa2.5□□□□□ -2.01
PTI1YGR156W APS1P35181 156 aa2.5□□□□□ -2.01
PTI1YGR156W YPT52P36018 234 aaKnown RBP2.5□□□□□ -2.01
PTI1YGR156W TIF34P40217 347 aaKnown RBP2.5□□□□□ -2.01
PTI1YGR156W RSM25P40496 264 aa2.5□□□□□ -2.01
PTI1YGR156W YIL059CP40520 121 aa2.5□□□□□ -2.01
PTI1YGR156W BUD13P46947 266 aaPredicted RBP2.5□□□□□ -2.01
PTI1YGR156W OST2P46964 130 aa2.5□□□□□ -2.01
PTI1YGR156W CAB4P53332 305 aa2.5□□□□□ -2.01
PTI1YGR156W ABF2Q02486 183 aa2.5□□□□□ -2.01
PTI1YGR156W PET191Q02772 108 aa2.5□□□□□ -2.01
PTI1YGR156W YDR248CQ03786 193 aa2.5□□□□□ -2.01
PTI1YGR156W GRH1Q04410 372 aaKnown RBP2.5□□□□□ -2.01
PTI1YGR156W YOL024WQ08172 172 aa2.5□□□□□ -2.01
PTI1YGR156W SLD7Q08457 257 aa2.5□□□□□ -2.01
PTI1YGR156W NIP7Q08962 181 aaKnown RBP2.5□□□□□ -2.01
PTI1YGR156W RPL22AP05749 121 aaKnown RBP2.49□□□□□ -2.01
PTI1YGR156W ATP7P30902 174 aa2.49□□□□□ -2.01
PTI1YGR156W IRC22P40006 225 aa2.49□□□□□ -2.01
PTI1YGR156W YER084WP40057 128 aa2.49□□□□□ -2.01
PTI1YGR156W ERG10P41338 398 aaKnown RBP2.49□□□□□ -2.01
PTI1YGR156W YJR056CP47115 236 aa2.49□□□□□ -2.01
PTI1YGR156W YNL010WP53981 241 aaKnown RBP2.49□□□□□ -2.01
PTI1YGR156W YML108WQ03759 105 aa2.49□□□□□ -2.01
PTI1YGR156W YML096WQ04489 525 aa2.49□□□□□ -2.01
PTI1YGR156W FEX1Q08913 375 aa2.49□□□□□ -2.01
PTI1YGR156W FEX2Q08991 375 aa2.49□□□□□ -2.01
PTI1YGR156W FMT1P32785 401 aa2.48□□□□□ -2.01
PTI1YGR156W MRPL28P36527 147 aa2.48□□□□□ -2.01
PTI1YGR156W ECM33P38248 429 aaKnown RBP2.48□□□□□ -2.01
PTI1YGR156W GRE3P38715 327 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
PTI1YGR156W YER034WP40022 185 aaKnown RBP2.48□□□□□ -2.01
PTI1YGR156W SPO73P40031 143 aa2.48□□□□□ -2.01
PTI1YGR156W SMD3P43321 101 aaKnown RBP2.48□□□□□ -2.01
PTI1YGR156W PIR5P46999 287 aa2.48□□□□□ -2.01
PTI1YGR156W PRM8P53174 237 aa2.48□□□□□ -2.01
PTI1YGR156W DIA1P54005 336 aa2.48□□□□□ -2.01
PTI1YGR156W GGA1Q06336 557 aa2.48□□□□□ -2.01
PTI1YGR156W YPL257WQ08974 193 aa2.48□□□□□ -2.01
PTI1YGR156W YOR020W-AQ3E824 90 aa2.48□□□□□ -2.01
PTI1YGR156W Q0255P03881 472 aa2.47□□□□□ -2.01
PTI1YGR156W SPS18P32572 300 aa2.47□□□□□ -2.01
PTI1YGR156W CTR2P38865 189 aa2.47□□□□□ -2.01
PTI1YGR156W EGD2P38879 174 aaKnown RBP2.47□□□□□ -2.01
PTI1YGR156W AVT2P39981 480 aa2.47□□□□□ -2.01
PTI1YGR156W COG3P40094 801 aa2.47□□□□□ -2.01
PTI1YGR156W YJR141WP47172 347 aaPredicted RBP2.47□□□□□ -2.01
PTI1YGR156W YGR050CP53231 118 aa2.47□□□□□ -2.01
PTI1YGR156W PEX12Q04370 399 aa2.47□□□□□ -2.01
PTI1YGR156W YIL046W-AQ3E7Z4 54 aa2.47□□□□□ -2.01
PTI1YGR156W LAA1P39526 2014 aa2.47□□□□□ -2.01
PTI1YGR156W DSF1P0CX08 502 aa2.46□□□□□ -2.02
PTI1YGR156W YNR073CP0CX09 502 aa2.46□□□□□ -2.02
PTI1YGR156W KRE1P17260 313 aa2.46□□□□□ -2.02
PTI1YGR156W CCA1P21269 546 aa2.46□□□□□ -2.02
PTI1YGR156W SDH4P37298 181 aa2.46□□□□□ -2.02
PTI1YGR156W YBR063CP38083 404 aa2.46□□□□□ -2.02
PTI1YGR156W DOG2P38773 246 aa2.46□□□□□ -2.02
PTI1YGR156W DOG1P38774 246 aa2.46□□□□□ -2.02
PTI1YGR156W TRM5P38793 499 aa2.46□□□□□ -2.02
PTI1YGR156W GON7P46984 123 aa2.46□□□□□ -2.02
PTI1YGR156W YJL016WP47072 561 aa2.46□□□□□ -2.02
PTI1YGR156W SSU72P53538 206 aaPredicted RBP2.46□□□□□ -2.02
PTI1YGR156W MZM1Q03429 123 aaPredicted RBP2.46□□□□□ -2.02
PTI1YGR156W YPR195CQ06594 109 aa2.46□□□□□ -2.02
PTI1YGR156W YNG1Q08465 219 aa2.46□□□□□ -2.02
PTI1YGR156W USB1Q12208 290 aaKnown RBP2.46□□□□□ -2.02
PTI1YGR156W BBP1Q12365 385 aa2.46□□□□□ -2.02
PTI1YGR156W CDC7P06243 507 aa2.45□□□□□ -2.02
PTI1YGR156W SEC17P32602 292 aa2.45□□□□□ -2.02
PTI1YGR156W YHR125WP38831 101 aa2.45□□□□□ -2.02
PTI1YGR156W ARC15P40518 154 aaRIP-Chip data2.45□□□□□ -2.02not detected
PTI1YGR156W YIL001WP40560 513 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 907 ms