RNA–Protein interactions for RNA: YFR049W

YMR31, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene YMR31, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR31	YFR049W	NVJ1	P38881	321 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	RSM25	P40496	264 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	FMP32	P43557	207 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	ARP3	P47117	449 aa	Known RBP	1.82	□□□□□ -2.12
YMR31	YFR049W	YJR111C	P47148	283 aa	Known RBP	1.82	□□□□□ -2.12
YMR31	YFR049W	SBH2	P52871	88 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	APJ1	P53940	528 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	YDR249C	Q03787	373 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	HNT1	Q04344	158 aa	Known RBP	1.82	□□□□□ -2.12
YMR31	YFR049W	SHH4	Q06236	168 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	RDS3	Q06835	107 aa	Predicted RBP	1.82	□□□□□ -2.12
YMR31	YFR049W	YLR031W	Q07978	186 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	FEX1	Q08913	375 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	FEX2	Q08991	375 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	AKR2	Q12013	749 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	MCP1	Q12106	302 aa		1.82	□□□□□ -2.12
YMR31	YFR049W	TIM9	O74700	87 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	CMD1	P06787	147 aa	Known RBP	1.81	□□□□□ -2.12
YMR31	YFR049W	DPM1	P14020	267 aa	Known RBP	1.81	□□□□□ -2.12
YMR31	YFR049W	MRPS28	P21771	286 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	MAK5	P38112	773 aa	Predicted RBP	1.81	□□□□□ -2.12
YMR31	YFR049W	DER1	P38307	211 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	AVT2	P39981	480 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	ICE2	P40499	491 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	AIF1	P52923	378 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	YDR274C	P87283	123 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	SWP1	Q02795	286 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	PLP1	Q04004	230 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	MHT1	Q12525	324 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	TSC3	Q3E790	80 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	YPR014C	Q6B0W2	109 aa		1.81	□□□□□ -2.12
YMR31	YFR049W	CCA1	P21269	546 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	RSA4	P25382	515 aa	Known RBP	1.8	□□□□□ -2.12
YMR31	YFR049W	ARO7	P32178	256 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	YKL102C	P34249	101 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	CTR2	P38865	189 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	SMD3	P43321	101 aa	Known RBP	1.8	□□□□□ -2.12
YMR31	YFR049W	MNN5	P46982	586 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	SNX4	P47057	423 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	TMA22	P47089	198 aa	Predicted RBP	1.8	□□□□□ -2.12
YMR31	YFR049W	EAF6	P47128	113 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	YGL088W	P53151	121 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	NUP49	Q02199	472 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	MAK3	Q03503	176 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	SPG3	Q04398	127 aa	Predicted RBP	1.8	□□□□□ -2.12
YMR31	YFR049W	YOL014W	Q08110	124 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	YML100W-A	Q8TGT0	57 aa		1.8	□□□□□ -2.12
YMR31	YFR049W	FAB1	P34756	2278 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	ATP15	P21306	62 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	MRPL17	P36528	281 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	MED6	P38782	295 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	CAB4	P53332	305 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	SLM2	P53955	656 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	RRP17	Q04031	235 aa	Predicted RBP	1.79	□□□□□ -2.12
YMR31	YFR049W	GPI17	Q04080	534 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	YLR053C	Q12026	108 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	ATO3	Q12359	275 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	MPD1	Q12404	318 aa	Known RBP	1.79	□□□□□ -2.12
YMR31	YFR049W	RDI1	Q12434	202 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	YDL012C	Q12489	107 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	PET20	Q99373	253 aa		1.79	□□□□□ -2.12
YMR31	YFR049W	MIG1	P27705	504 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	MEI4	P29467	408 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	SCM4	P32564	187 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	YHL026C	P38740	315 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	EDC3	P39998	551 aa	Known RBP	1.78	□□□□□ -2.12
YMR31	YFR049W	GVP36	P40531	326 aa	Known RBP	1.78	□□□□□ -2.12
YMR31	YFR049W	SER2	P42941	309 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	PGA1	P53896	198 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	YDR476C	Q03362	224 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	HPT1	Q04178	221 aa	Known RBP	1.78	□□□□□ -2.12
YMR31	YFR049W	DYN3	Q04949	312 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	ARR2	Q06597	130 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	YOR342C	Q12182	319 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	PRM7	Q12459	698 aa		1.78	□□□□□ -2.12
YMR31	YFR049W	YPR096C	O13587	100 aa		1.77	□□□□□ -2.13
YMR31	YFR049W	BUB2	P26448	306 aa	Predicted RBP	1.77	□□□□□ -2.13
YMR31	YFR049W	SRP102	P36057	244 aa	Predicted RBP	1.77	□□□□□ -2.13
YMR31	YFR049W	TVP38	P36164	337 aa		1.77	□□□□□ -2.13
YMR31	YFR049W	OPY1	P38271	328 aa		1.77	□□□□□ -2.13
YMR31	YFR049W	FCY21	P40039	528 aa		1.77	□□□□□ -2.13
YMR31	YFR049W	PGD1	P40356	397 aa		1.77	□□□□□ -2.13
YMR31	YFR049W	SKI6	P46948	246 aa	Predicted RBP	1.77	□□□□□ -2.13
YMR31	YFR049W	CIS3	P47001	227 aa		1.77	□□□□□ -2.13
YMR31	YFR049W	GPI14	P47088	403 aa	Known RBP	1.77	□□□□□ -2.13
YMR31	YFR049W	YGR219W	P53307	113 aa		1.77	□□□□□ -2.13
YMR31	YFR049W	TMA20	P89886	181 aa	Predicted RBP	1.77	□□□□□ -2.13
YMR31	YFR049W	NSL1	Q12143	216 aa		1.77	□□□□□ -2.13
YMR31	YFR049W	PDR18	P53756	1333 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	YCR023C	P25351	611 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	OCH1	P31755	480 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	YHR180W	P38868	163 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	YEA4	P40004	342 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	RFC2	P40348	353 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	PRM10	P42946	383 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	TDA4	P47153	279 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	YJR146W	P47174	117 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	MPA43	P53583	542 aa	Predicted RBP	1.76	□□□□□ -2.13
YMR31	YFR049W	HSK3	P69852	69 aa		1.76	□□□□□ -2.13
YMR31	YFR049W	YMR099C	Q03161	297 aa	Known RBP	1.76	□□□□□ -2.13

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms