RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C MATALPHA2P0CY08 210 aa1.68□□□□□ -2.14
VAB2YEL005C HMLALPHA2P0CY09 210 aa1.68□□□□□ -2.14
VAB2YEL005C CKS1P20486 150 aaKnown RBP1.68□□□□□ -2.14
VAB2YEL005C GPM2Q12008 311 aa1.68□□□□□ -2.14
VAB2YEL005C MCP1Q12106 302 aa1.68□□□□□ -2.14
VAB2YEL005C RPB3P16370 318 aaKnown RBP1.67□□□□□ -2.14
VAB2YEL005C SHE2P36068 246 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
VAB2YEL005C YKR045CP36138 183 aa1.67□□□□□ -2.14
VAB2YEL005C UTP30P36144 274 aaKnown RBP1.67□□□□□ -2.14
VAB2YEL005C YBR285WP38354 144 aa1.67□□□□□ -2.14
VAB2YEL005C FUS2Q05670 677 aa1.67□□□□□ -2.14
VAB2YEL005C FSF1Q12029 327 aaKnown RBP1.67□□□□□ -2.14
VAB2YEL005C IKI3Q06706 1349 aaKnown RBP1.66□□□□□ -2.14
VAB2YEL005C AIM25P47140 327 aa1.66□□□□□ -2.14
VAB2YEL005C MMS2P53152 137 aa1.66□□□□□ -2.14
VAB2YEL005C YNR077CP53758 84 aa1.66□□□□□ -2.14
VAB2YEL005C YNG1Q08465 219 aa1.66□□□□□ -2.14
VAB2YEL005C YFR032C-BQ8TGU2 87 aa1.66□□□□□ -2.14
VAB2YEL005C BEM2P39960 2167 aaKnown RBP1.66□□□□□ -2.14
VAB2YEL005C QCR7P00128 127 aa1.65□□□□□ -2.15
VAB2YEL005C YPK2P18961 677 aa1.65□□□□□ -2.15
VAB2YEL005C TFC1P32367 649 aa1.65□□□□□ -2.15
VAB2YEL005C YBR209WP38311 105 aa1.65□□□□□ -2.15
VAB2YEL005C GLE2P40066 365 aa1.65□□□□□ -2.15
VAB2YEL005C YDR274CP87283 123 aa1.65□□□□□ -2.15
VAB2YEL005C PET191Q02772 108 aa1.65□□□□□ -2.15
VAB2YEL005C GRX3Q03835 250 aa1.65□□□□□ -2.15
VAB2YEL005C YOL160WQ08321 113 aa1.65□□□□□ -2.15
VAB2YEL005C ATG40Q99325 256 aa1.65□□□□□ -2.15
VAB2YEL005C ASF2P32448 525 aaPredicted RBP1.64□□□□□ -2.15
VAB2YEL005C TMA19P35691 167 aaKnown RBP1.64□□□□□ -2.15
VAB2YEL005C AIM2P39721 246 aa1.64□□□□□ -2.15
VAB2YEL005C YER135CP40082 130 aa1.64□□□□□ -2.15
VAB2YEL005C NOP19P53317 196 aaPredicted RBP1.64□□□□□ -2.15
VAB2YEL005C RTC4P53850 401 aa1.64□□□□□ -2.15
VAB2YEL005C HNT1Q04344 158 aaKnown RBP1.64□□□□□ -2.15
VAB2YEL005C YCL012CQ8J0M4 134 aa1.64□□□□□ -2.15
VAB2YEL005C PDR18P53756 1333 aa1.64□□□□□ -2.15
VAB2YEL005C SIR2P06700 562 aa1.63□□□□□ -2.15
VAB2YEL005C CNB1P25296 175 aa1.63□□□□□ -2.15
VAB2YEL005C YCR090CP25654 182 aaKnown RBP1.63□□□□□ -2.15
VAB2YEL005C GAA1P39012 614 aa1.63□□□□□ -2.15
VAB2YEL005C ERJ5P43613 295 aaPredicted RBP1.63□□□□□ -2.15
VAB2YEL005C GGA1Q06336 557 aa1.63□□□□□ -2.15
VAB2YEL005C ANT1Q06497 328 aa1.63□□□□□ -2.15
VAB2YEL005C ODC2Q99297 307 aa1.63□□□□□ -2.15
VAB2YEL005C MRS1P07266 363 aa1.62□□□□□ -2.15
VAB2YEL005C ATP15P21306 62 aa1.62□□□□□ -2.15
VAB2YEL005C YGL010WP25338 174 aa1.62□□□□□ -2.15
VAB2YEL005C ERG10P41338 398 aaKnown RBP1.62□□□□□ -2.15
VAB2YEL005C GIM3P53900 129 aa1.62□□□□□ -2.15
VAB2YEL005C DYN3Q04949 312 aa1.62□□□□□ -2.15
VAB2YEL005C CSI2Q08054 341 aa1.62□□□□□ -2.15
VAB2YEL005C RIO1Q12196 484 aaKnown RBP1.62□□□□□ -2.15
VAB2YEL005C UBR2Q07963 1872 aa1.61□□□□□ -2.15
VAB2YEL005C MBF1O14467 151 aaKnown RBP1.61□□□□□ -2.15
VAB2YEL005C SNF4P12904 322 aa1.61□□□□□ -2.15
VAB2YEL005C KDX1P36005 433 aa1.61□□□□□ -2.15
VAB2YEL005C CAF4P36130 643 aa1.61□□□□□ -2.15
VAB2YEL005C RPL13BP40212 199 aaKnown RBP1.61□□□□□ -2.15
VAB2YEL005C SKI6P46948 246 aaPredicted RBP1.61□□□□□ -2.15
VAB2YEL005C NUP49Q02199 472 aa1.61□□□□□ -2.15
VAB2YEL005C CUE4Q04201 117 aaPredicted RBP1.61□□□□□ -2.15
VAB2YEL005C YLR031WQ07978 186 aa1.61□□□□□ -2.15
VAB2YEL005C RPL13AQ12690 199 aaPredicted RBP1.61□□□□□ -2.15
VAB2YEL005C YDL085C-AQ3E7B7 68 aaKnown RBP1.61□□□□□ -2.15
VAB2YEL005C CPA1P07258 411 aaKnown RBP1.6□□□□□ -2.15
VAB2YEL005C QCR8P08525 94 aa1.6□□□□□ -2.15
VAB2YEL005C FPR1P20081 114 aaKnown RBP1.6□□□□□ -2.15
VAB2YEL005C OCH1P31755 480 aa1.6□□□□□ -2.15
VAB2YEL005C ECM4P36156 370 aa1.6□□□□□ -2.15
VAB2YEL005C TVP38P36164 337 aa1.6□□□□□ -2.15
VAB2YEL005C TVP23P38962 199 aa1.6□□□□□ -2.15
VAB2YEL005C PDS1P40316 373 aaPredicted RBP1.6□□□□□ -2.15
VAB2YEL005C HOP2P53187 214 aa1.6□□□□□ -2.15
VAB2YEL005C MZM1Q03429 123 aaPredicted RBP1.6□□□□□ -2.15
VAB2YEL005C YLR162WQ06235 118 aa1.6□□□□□ -2.15
VAB2YEL005C YDL180WQ12301 547 aa1.6□□□□□ -2.15
VAB2YEL005C RAD9P14737 1309 aa1.6□□□□□ -2.15
VAB2YEL005C GPA2P10823 449 aa1.59□□□□□ -2.15
VAB2YEL005C OPY1P38271 328 aa1.59□□□□□ -2.15
VAB2YEL005C YBR220CP38318 560 aa1.59□□□□□ -2.15
VAB2YEL005C SHG1P38337 142 aa1.59□□□□□ -2.15
VAB2YEL005C YER134CP40081 178 aa1.59□□□□□ -2.15
VAB2YEL005C TMA22P47089 198 aaPredicted RBP1.59□□□□□ -2.15
VAB2YEL005C POP3P53833 195 aaPredicted RBP1.59□□□□□ -2.15
VAB2YEL005C YNL184CP53876 108 aa1.59□□□□□ -2.15
VAB2YEL005C YET3Q07451 203 aa1.59□□□□□ -2.15
VAB2YEL005C YLR036CQ07986 203 aa1.59□□□□□ -2.15
VAB2YEL005C IGO2Q9P305 131 aa1.59□□□□□ -2.15
VAB2YEL005C YLR236CA0A023PZG4 107 aa1.58□□□□□ -2.16
VAB2YEL005C ADE1P27616 306 aa1.58□□□□□ -2.16
VAB2YEL005C PAN3P36102 679 aaPredicted RBP1.58□□□□□ -2.16
VAB2YEL005C KNH1P50112 268 aa1.58□□□□□ -2.16
VAB2YEL005C RAD28Q12021 506 aa1.58□□□□□ -2.16
VAB2YEL005C YEA4P40004 342 aa1.57□□□□□ -2.16
VAB2YEL005C YER034WP40022 185 aaKnown RBP1.57□□□□□ -2.16
VAB2YEL005C SER2P42941 309 aa1.57□□□□□ -2.16
VAB2YEL005C ARP3P47117 449 aaKnown RBP1.57□□□□□ -2.16
VAB2YEL005C YMR295CQ03559 197 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 91.7 ms