RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	RRS1	Q08746	203 aa	Known RBP	3.22	□□□□□ -1.89
TRP4	YDR354W	ATP16	Q12165	160 aa		3.22	□□□□□ -1.89
TRP4	YDR354W	YLR126C	Q12288	251 aa		3.22	□□□□□ -1.89
TRP4	YDR354W	RPN6	Q12377	434 aa		3.22	□□□□□ -1.89
TRP4	YDR354W	GTT2	Q12390	233 aa		3.22	□□□□□ -1.89
TRP4	YDR354W	MHF2	Q3E829	80 aa		3.22	□□□□□ -1.89
TRP4	YDR354W	RAS2	P01120	322 aa	Known RBP	3.21	□□□□□ -1.9
TRP4	YDR354W	HIS3	P06633	220 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	RPL31A	P0C2H8	113 aa	Known RBP	3.21	□□□□□ -1.9
TRP4	YDR354W	IDP1	P21954	428 aa	Known RBP	3.21	□□□□□ -1.9
TRP4	YDR354W	SEC22	P22214	214 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	RSA4	P25382	515 aa	Known RBP	3.21	□□□□□ -1.9
TRP4	YDR354W	RPL16A	P26784	199 aa	Known RBP	3.21	□□□□□ -1.9
TRP4	YDR354W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
TRP4	YDR354W	SEC17	P32602	292 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	FMT1	P32785	401 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	TIP20	P33891	701 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	SMP1	P38128	452 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
TRP4	YDR354W	EFM1	P38732	585 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	YHL026C	P38740	315 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	IPI1	P38803	334 aa	Predicted RBP	3.21	□□□□□ -1.9
TRP4	YDR354W	VMA7	P39111	118 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	BDH1	P39714	382 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	SPO73	P40031	143 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	SER33	P40510	469 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	YGR201C	P42936	225 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	BUD13	P46947	266 aa	Predicted RBP	3.21	□□□□□ -1.9
TRP4	YDR354W	AIM23	P47015	356 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	PRM8	P53174	237 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	ALG13	P53178	202 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	SWC4	P53201	476 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	YNR066C	P53752	436 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	HCH1	P53834	153 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	NRK1	P53915	240 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	CDC14	Q00684	551 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	NEJ1	Q06148	342 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	YOL131W	Q08270	108 aa		3.21	□□□□□ -1.9
TRP4	YDR354W	BRR2	P32639	2163 aa	Known RBP	3.2	□□□□□ -1.9
TRP4	YDR354W	DBF2	P22204	572 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	POF1	P25576	258 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	HSP30	P25619	332 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	RPL16B	P26785	198 aa	Known RBP	3.2	□□□□□ -1.9
TRP4	YDR354W	LDS1	P31379	325 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	QRI5	P32344	111 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	YKL187C	P34231	750 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	JEN1	P36035	616 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	YCR087C-A	P37263	153 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	FMP23	P38231	175 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	SMB1	P40018	196 aa	Known RBP	3.2	□□□□□ -1.9
TRP4	YDR354W	YJL218W	P40892	196 aa	Known RBP	3.2	□□□□□ -1.9
TRP4	YDR354W	PMT4	P46971	762 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	JHD2	P47156	728 aa	Predicted RBP	3.2	□□□□□ -1.9
TRP4	YDR354W	NHP10	Q03435	203 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	AIM34	Q03673	198 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	SNX41	Q04053	625 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	NOC4	Q06512	552 aa	Predicted RBP	3.2	□□□□□ -1.9
TRP4	YDR354W	YLR036C	Q07986	203 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	YLR050C	Q12155	161 aa	Known RBP	3.2	□□□□□ -1.9
TRP4	YDR354W	YPS3	Q12303	508 aa		3.2	□□□□□ -1.9
TRP4	YDR354W	RPL23A	P0CX41	137 aa	Known RBP	3.19	□□□□□ -1.9
TRP4	YDR354W	RPL23B	P0CX42	137 aa	Known RBP	3.19	□□□□□ -1.9
TRP4	YDR354W	TFS1	P14306	219 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	HOM6	P31116	359 aa	Known RBP	3.19	□□□□□ -1.9
TRP4	YDR354W	TVP23	P38962	199 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	YJR111C	P47148	283 aa	Known RBP	3.19	□□□□□ -1.9
TRP4	YDR354W	MPC1	P53157	130 aa	Known RBP	3.19	□□□□□ -1.9
TRP4	YDR354W	COG7	P53195	279 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	RNH201	P53942	307 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	DML1	Q03652	475 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	YMD8	Q03697	442 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	LDB18	Q07887	179 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	YPL245W	Q12179	454 aa	Known RBP	3.19	□□□□□ -1.9
TRP4	YDR354W	SME1	Q12330	94 aa	Predicted RBP	3.19	□□□□□ -1.9
TRP4	YDR354W	UTP23	Q12339	254 aa	Known RBP	3.19	□□□□□ -1.9
TRP4	YDR354W	PST1	Q12355	444 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	RDI1	Q12434	202 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	Q0144	Q9ZZW2	109 aa		3.19	□□□□□ -1.9
TRP4	YDR354W	CUP2	P15315	225 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	ERD1	P16151	362 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	PPH21	P23594	369 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	TAH1	P25638	111 aa	Predicted RBP	3.18	□□□□□ -1.9
TRP4	YDR354W	PMT2	P31382	759 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	NTF2	P33331	125 aa	Known RBP	3.18	□□□□□ -1.9
TRP4	YDR354W	YBR242W	P38331	238 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	RCK1	P38622	512 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	YPT35	P38815	214 aa	Known RBP	3.18	□□□□□ -1.9
TRP4	YDR354W	RMD6	P39975	231 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	RRG9	P40156	214 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	SER2	P42941	309 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	MNN5	P46982	586 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	TPN1	P53099	579 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	JAC1	P53193	184 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	CDH1	P53197	566 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	DYN2	Q02647	92 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	YML096W	Q04489	525 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	AKR2	Q12013	749 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	TPO4	Q12256	659 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	ATP14	Q12349	124 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	YPR064W	Q12492	139 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 119.7 ms