RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C MRPL35Q06678 367 aa3.84□□□□□ -1.79
NUP42YDR192C FEX1Q08913 375 aa3.84□□□□□ -1.79
NUP42YDR192C ATG41Q12048 136 aa3.84□□□□□ -1.79
NUP42YDR192C TMS1Q12116 473 aa3.84□□□□□ -1.79
NUP42YDR192C YRA1Q12159 226 aaKnown RBP3.84□□□□□ -1.79
NUP42YDR192C TIR4Q12218 487 aaPredicted RBP3.84□□□□□ -1.79
NUP42YDR192C RTR2Q12378 196 aa3.84□□□□□ -1.79
NUP42YDR192C YIL046W-AQ3E7Z4 54 aa3.84□□□□□ -1.79
NUP42YDR192C YCR024C-BQ3E7Z8 88 aa3.84□□□□□ -1.79
NUP42YDR192C TRA1P38811 3744 aa3.83□□□□□ -1.8
NUP42YDR192C RPS8AP0CX39 200 aaKnown RBP3.83□□□□□ -1.8
NUP42YDR192C RPS8BP0CX40 200 aaKnown RBP3.83□□□□□ -1.8
NUP42YDR192C RPL35AP0CX84 120 aaKnown RBP3.83□□□□□ -1.8
NUP42YDR192C RPL35BP0CX85 120 aaKnown RBP3.83□□□□□ -1.8
NUP42YDR192C STE18P18852 110 aa3.83□□□□□ -1.8
NUP42YDR192C MAG1P22134 296 aaKnown RBP3.83□□□□□ -1.8
NUP42YDR192C IFM1P25038 676 aa3.83□□□□□ -1.8
NUP42YDR192C PPA2P28239 310 aa3.83□□□□□ -1.8
NUP42YDR192C TIR2P33890 251 aa3.83□□□□□ -1.8
NUP42YDR192C UMP1P38293 148 aa3.83□□□□□ -1.8
NUP42YDR192C OM14P38325 134 aa3.83□□□□□ -1.8
NUP42YDR192C SLM1P40485 686 aa3.83□□□□□ -1.8
NUP42YDR192C BMT5P40493 336 aa3.83□□□□□ -1.8
NUP42YDR192C YFR057WP43625 151 aa3.83□□□□□ -1.8
NUP42YDR192C SNX4P47057 423 aa3.83□□□□□ -1.8
NUP42YDR192C YJL016WP47072 561 aa3.83□□□□□ -1.8
NUP42YDR192C GPI14P47088 403 aaKnown RBP3.83□□□□□ -1.8
NUP42YDR192C MST27P53176 234 aa3.83□□□□□ -1.8
NUP42YDR192C SUR7P54003 302 aa3.83□□□□□ -1.8
NUP42YDR192C KEI1Q06346 221 aa3.83□□□□□ -1.8
NUP42YDR192C MRX9Q07349 420 aaKnown RBP3.83□□□□□ -1.8
NUP42YDR192C YLR031WQ07978 186 aa3.83□□□□□ -1.8
NUP42YDR192C YNG1Q08465 219 aa3.83□□□□□ -1.8
NUP42YDR192C MDM32Q12171 622 aa3.83□□□□□ -1.8
NUP42YDR192C YHR214C-EQ8TGK0 99 aa3.83□□□□□ -1.8
NUP42YDR192C BRR2P32639 2163 aaKnown RBP3.83□□□□□ -1.8
NUP42YDR192C POL2P21951 2222 aaKnown RBP3.83□□□□□ -1.8
NUP42YDR192C TDH2P00358 332 aaKnown RBP3.82□□□□□ -1.8
NUP42YDR192C ADK1P07170 222 aaKnown RBP3.82□□□□□ -1.8
NUP42YDR192C ARG80P07249 177 aa3.82□□□□□ -1.8
NUP42YDR192C RPS16AP0CX51 143 aaKnown RBP3.82□□□□□ -1.8
NUP42YDR192C RPS16BP0CX52 143 aaKnown RBP3.82□□□□□ -1.8
NUP42YDR192C RPL30P14120 105 aaKnown RBP3.82□□□□□ -1.8
NUP42YDR192C PET18P25362 215 aa3.82□□□□□ -1.8
NUP42YDR192C MRP17P28778 131 aa3.82□□□□□ -1.8
NUP42YDR192C ERG24P32462 438 aaKnown RBP3.82□□□□□ -1.8
NUP42YDR192C MRPL39P36533 70 aa3.82□□□□□ -1.8
NUP42YDR192C CAT5P41735 233 aa3.82□□□□□ -1.8
NUP42YDR192C YFR054CP43622 192 aa3.82□□□□□ -1.8
NUP42YDR192C DIE2P50076 525 aa3.82□□□□□ -1.8
NUP42YDR192C ASI3P53983 676 aa3.82□□□□□ -1.8
NUP42YDR192C YDR209CQ03480 137 aa3.82□□□□□ -1.8
NUP42YDR192C YOR385WQ08909 290 aa3.82□□□□□ -1.8
NUP42YDR192C FEX2Q08991 375 aa3.82□□□□□ -1.8
NUP42YDR192C ODC2Q99297 307 aa3.82□□□□□ -1.8
NUP42YDR192C Q0144Q9ZZW2 109 aa3.82□□□□□ -1.8
NUP42YDR192C DSF1P0CX08 502 aa3.81□□□□□ -1.8
NUP42YDR192C YNR073CP0CX09 502 aa3.81□□□□□ -1.8
NUP42YDR192C STF2P16965 84 aa3.81□□□□□ -1.8
NUP42YDR192C RNP1P32385 249 aa3.81□□□□□ -1.8
NUP42YDR192C SUA5P32579 426 aa3.81□□□□□ -1.8
NUP42YDR192C VAM7P32912 316 aa3.81□□□□□ -1.8
NUP42YDR192C PPQ1P32945 549 aa3.81□□□□□ -1.8
NUP42YDR192C UTP30P36144 274 aaKnown RBP3.81□□□□□ -1.8
NUP42YDR192C YMR144WP40214 342 aaKnown RBP3.81□□□□□ -1.8
NUP42YDR192C YJR085CP47131 105 aaKnown RBP3.81□□□□□ -1.8
NUP42YDR192C BXI1P48558 297 aa3.81□□□□□ -1.8
NUP42YDR192C ALG9P53868 555 aaKnown RBP3.81□□□□□ -1.8
NUP42YDR192C PRP11Q07350 266 aaPredicted RBP3.81□□□□□ -1.8
NUP42YDR192C PML1Q07930 204 aaPredicted RBP3.81□□□□□ -1.8
NUP42YDR192C YOL029CQ08187 201 aa3.81□□□□□ -1.8
NUP42YDR192C YDL180WQ12301 547 aa3.81□□□□□ -1.8
NUP42YDR192C HMS1Q12398 434 aa3.81□□□□□ -1.8
NUP42YDR192C RPL25P04456 142 aaKnown RBP3.8□□□□□ -1.8
NUP42YDR192C SGA1P08019 549 aa3.8□□□□□ -1.8
NUP42YDR192C MDH2P22133 377 aa3.8□□□□□ -1.8
NUP42YDR192C YCR016WP25617 290 aaKnown RBP3.8□□□□□ -1.8
NUP42YDR192C ACB1P31787 87 aa3.8□□□□□ -1.8
NUP42YDR192C ACP1P32463 125 aa3.8□□□□□ -1.8
NUP42YDR192C TCA17P32613 152 aa3.8□□□□□ -1.8
NUP42YDR192C COS9P36034 407 aa3.8□□□□□ -1.8
NUP42YDR192C YPC1P38298 316 aa3.8□□□□□ -1.8
NUP42YDR192C VMA22P38784 181 aa3.8□□□□□ -1.8
NUP42YDR192C NAS2P40555 220 aa3.8□□□□□ -1.8
NUP42YDR192C MOB2P43563 287 aa3.8□□□□□ -1.8
NUP42YDR192C AGX1P43567 385 aa3.8□□□□□ -1.8
NUP42YDR192C CIN2P46670 268 aa3.8□□□□□ -1.8
NUP42YDR192C RPN14P53196 417 aa3.8□□□□□ -1.8
NUP42YDR192C RNH201P53942 307 aa3.8□□□□□ -1.8
NUP42YDR192C HHT1P61830 136 aa3.8□□□□□ -1.8
NUP42YDR192C YML018CQ03730 393 aa3.8□□□□□ -1.8
NUP42YDR192C RAF1Q06891 181 aa3.8□□□□□ -1.8
NUP42YDR192C RFU1Q08003 200 aa3.8□□□□□ -1.8
NUP42YDR192C SCP1Q08873 200 aa3.8□□□□□ -1.8
NUP42YDR192C MCT1Q12283 360 aa3.8□□□□□ -1.8
NUP42YDR192C BBP1Q12365 385 aa3.8□□□□□ -1.8
NUP42YDR192C IZH2Q12442 317 aa3.8□□□□□ -1.8
NUP42YDR192C FAS1P07149 2051 aaKnown RBP3.8□□□□□ -1.8
NUP42YDR192C YBL010CP32788 280 aa3.79□□□□□ -1.8
NUP42YDR192C PAN3P36102 679 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms