RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C SPO7P18410 259 aa4.23□□□□□ -1.73
SCM3YDL139C ELO2P25358 347 aa4.23□□□□□ -1.73
SCM3YDL139C YIP5P53108 310 aa4.23□□□□□ -1.73
SCM3YDL139C YNR048WP53740 393 aa4.23□□□□□ -1.73
SCM3YDL139C APJ1P53940 528 aa4.23□□□□□ -1.73
SCM3YDL139C DID2P69771 204 aa4.23□□□□□ -1.73
SCM3YDL139C RSM23Q01163 450 aa4.23□□□□□ -1.73
SCM3YDL139C VPS28Q02767 242 aa4.23□□□□□ -1.73
SCM3YDL139C LUC7Q07508 261 aaPredicted RBP4.23□□□□□ -1.73
SCM3YDL139C YDL218WQ07629 317 aa4.23□□□□□ -1.73
SCM3YDL139C RRS1Q08746 203 aaKnown RBP4.23□□□□□ -1.73
SCM3YDL139C CRC1Q12289 327 aa4.23□□□□□ -1.73
SCM3YDL139C RRI1Q12468 440 aa4.23□□□□□ -1.73
SCM3YDL139C FSH3Q99369 266 aa4.23□□□□□ -1.73
SCM3YDL139C YHL037CP38733 133 aa4.22□□□□□ -1.73
SCM3YDL139C FLO5P38894 1075 aa4.22□□□□□ -1.73
SCM3YDL139C SEN34P39707 275 aa4.22□□□□□ -1.73
SCM3YDL139C PTI1P39927 425 aaPredicted RBP4.22□□□□□ -1.73
SCM3YDL139C XBP1P40489 647 aa4.22□□□□□ -1.73
SCM3YDL139C SGN1P40561 250 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
SCM3YDL139C WWM1P43582 211 aaKnown RBP4.22□□□□□ -1.73
SCM3YDL139C XPT1P47165 209 aa4.22□□□□□ -1.73
SCM3YDL139C RPN14P53196 417 aa4.22□□□□□ -1.73
SCM3YDL139C SED1Q01589 338 aa4.22□□□□□ -1.73
SCM3YDL139C ODC1Q03028 310 aa4.22□□□□□ -1.73
SCM3YDL139C PRM15Q03262 622 aa4.22□□□□□ -1.73
SCM3YDL139C CAB5Q03941 241 aa4.22□□□□□ -1.73
SCM3YDL139C BER1Q06688 274 aaKnown RBP4.22□□□□□ -1.73
SCM3YDL139C SRL2Q12020 392 aa4.22□□□□□ -1.73
SCM3YDL139C AEP3Q12089 606 aa4.22□□□□□ -1.73
SCM3YDL139C RTR2Q12378 196 aa4.22□□□□□ -1.73
SCM3YDL139C YPR108W-AQ3E7B3 70 aa4.22□□□□□ -1.73
SCM3YDL139C QCR2P07257 368 aa4.21□□□□□ -1.74
SCM3YDL139C FUS3P16892 353 aaKnown RBP4.21□□□□□ -1.74
SCM3YDL139C SEC62P21825 274 aa4.21□□□□□ -1.74
SCM3YDL139C PDC2P32896 925 aa4.21□□□□□ -1.74
SCM3YDL139C YOX1P34161 385 aa4.21□□□□□ -1.74
SCM3YDL139C POP2P39008 433 aa4.21□□□□□ -1.74
SCM3YDL139C RMD6P39975 231 aa4.21□□□□□ -1.74
SCM3YDL139C YIL024CP40543 189 aa4.21□□□□□ -1.74
SCM3YDL139C SNX4P47057 423 aa4.21□□□□□ -1.74
SCM3YDL139C ECM27P47144 725 aa4.21□□□□□ -1.74
SCM3YDL139C SIP18P50263 79 aa4.21□□□□□ -1.74
SCM3YDL139C MRPL19P53875 158 aa4.21□□□□□ -1.74
SCM3YDL139C RSM10Q03201 203 aa4.21□□□□□ -1.74
SCM3YDL139C YDR391CQ04170 232 aa4.21□□□□□ -1.74
SCM3YDL139C DPB4Q04603 196 aaKnown RBP4.21□□□□□ -1.74
SCM3YDL139C MRX9Q07349 420 aaKnown RBP4.21□□□□□ -1.74
SCM3YDL139C SNA4Q07549 140 aa4.21□□□□□ -1.74
SCM3YDL139C SCP1Q08873 200 aa4.21□□□□□ -1.74
SCM3YDL139C VMA9Q3E7B6 73 aa4.21□□□□□ -1.74
SCM3YDL139C YMR105W-AQ8TGS8 64 aa4.21□□□□□ -1.74
SCM3YDL139C IFM1P25038 676 aa4.2□□□□□ -1.74
SCM3YDL139C CLB6P32943 380 aa4.2□□□□□ -1.74
SCM3YDL139C SSO2P39926 295 aa4.2□□□□□ -1.74
SCM3YDL139C BMT5P40493 336 aa4.2□□□□□ -1.74
SCM3YDL139C GLR1P41921 483 aaKnown RBP4.2□□□□□ -1.74
SCM3YDL139C YJR012CP47087 207 aa4.2□□□□□ -1.74
SCM3YDL139C SRB7P47822 140 aa4.2□□□□□ -1.74
SCM3YDL139C SNO1Q03144 224 aa4.2□□□□□ -1.74
SCM3YDL139C RFU1Q08003 200 aa4.2□□□□□ -1.74
SCM3YDL139C PRM4Q12498 284 aa4.2□□□□□ -1.74
SCM3YDL139C TFB5Q3E7C1 72 aaPredicted RBP4.2□□□□□ -1.74
SCM3YDL139C YLR365WQ7LIF2 110 aa4.2□□□□□ -1.74
SCM3YDL139C DAL80P26343 269 aa4.19□□□□□ -1.74
SCM3YDL139C GCV3P39726 170 aaPredicted RBP4.19□□□□□ -1.74
SCM3YDL139C YEA6P39953 335 aa4.19□□□□□ -1.74
SCM3YDL139C SLM1P40485 686 aa4.19□□□□□ -1.74
SCM3YDL139C DFG10P40526 253 aa4.19□□□□□ -1.74
SCM3YDL139C EGT2P42835 1041 aa4.19□□□□□ -1.74
SCM3YDL139C SNN1P48232 102 aa4.19□□□□□ -1.74
SCM3YDL139C UBC13P52490 153 aa4.19□□□□□ -1.74
SCM3YDL139C PNC1P53184 216 aaKnown RBP4.19□□□□□ -1.74
SCM3YDL139C SLX9P53251 210 aaPredicted RBP4.19□□□□□ -1.74
SCM3YDL139C FIT1Q04433 528 aa4.19□□□□□ -1.74
SCM3YDL139C TOR1P35169 2470 aa4.19□□□□□ -1.74
SCM3YDL139C RPL25P04456 142 aaKnown RBP4.18□□□□□ -1.74
SCM3YDL139C CUP1-1P0CX80 61 aa4.18□□□□□ -1.74
SCM3YDL139C CUP1-2P0CX81 61 aa4.18□□□□□ -1.74
SCM3YDL139C MAG1P22134 296 aaKnown RBP4.18□□□□□ -1.74
SCM3YDL139C CNB1P25296 175 aa4.18□□□□□ -1.74
SCM3YDL139C YKL187CP34231 750 aa4.18□□□□□ -1.74
SCM3YDL139C MTR2P34232 184 aaKnown RBP4.18□□□□□ -1.74
SCM3YDL139C YPC1P38298 316 aa4.18□□□□□ -1.74
SCM3YDL139C RTC3P38804 111 aaPredicted RBP4.18□□□□□ -1.74
SCM3YDL139C GPI16P38875 610 aa4.18□□□□□ -1.74
SCM3YDL139C GAT2P40209 560 aa4.18□□□□□ -1.74
SCM3YDL139C PIR5P46999 287 aa4.18□□□□□ -1.74
SCM3YDL139C UBC12P52491 188 aa4.18□□□□□ -1.74
SCM3YDL139C WSC2P53832 503 aa4.18□□□□□ -1.74
SCM3YDL139C YIF1P53845 314 aaKnown RBP4.18□□□□□ -1.74
SCM3YDL139C YNL234WP53857 426 aa4.18□□□□□ -1.74
SCM3YDL139C DIG2Q03373 323 aaKnown RBP4.18□□□□□ -1.74
SCM3YDL139C YMR082CQ04276 118 aa4.18□□□□□ -1.74
SCM3YDL139C ECM18Q04623 453 aa4.18□□□□□ -1.74
SCM3YDL139C RIM9Q04734 239 aa4.18□□□□□ -1.74
SCM3YDL139C YOR015WQ12169 119 aa4.18□□□□□ -1.74
SCM3YDL139C RFM1Q12192 310 aa4.18□□□□□ -1.74
SCM3YDL139C YCT1Q12235 531 aa4.18□□□□□ -1.74
SCM3YDL139C POC4Q12245 148 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms