RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeastyeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP1BYDL130W YOL029CQ08187 201 aa12.62□□□□□ -0.39
RPP1BYDL130W RAD52P06778 471 aaKnown RBP12.61□□□□□ -0.39
RPP1BYDL130W OLE1P21147 510 aaKnown RBP12.61□□□□□ -0.39
RPP1BYDL130W TIF11P38912 153 aaKnown RBP12.61□□□□□ -0.39
RPP1BYDL130W BOL1Q3E793 110 aa12.61□□□□□ -0.39
RPP1BYDL130W NHP6BP11633 99 aaKnown RBP12.6□□□□□ -0.39
RPP1BYDL130W FEN2P25621 512 aaKnown RBP12.6□□□□□ -0.39
RPP1BYDL130W YBR242WP38331 238 aa12.6□□□□□ -0.39
RPP1BYDL130W YHR138CP38841 114 aaPredicted RBP12.6□□□□□ -0.39
RPP1BYDL130W IRC24P40580 263 aa12.6□□□□□ -0.39
RPP1BYDL130W TAX4P47030 604 aa12.6□□□□□ -0.39
RPP1BYDL130W TRM13Q12383 476 aa12.6□□□□□ -0.39
RPP1BYDL130W YNK1P36010 153 aaKnown RBP12.59□□□□□ -0.39
RPP1BYDL130W ENV7Q12003 364 aa12.59□□□□□ -0.39
RPP1BYDL130W MRPL13Q02204 264 aa12.58□□□□□ -0.4
RPP1BYDL130W YCR016WP25617 290 aaKnown RBP12.57□□□□□ -0.4
RPP1BYDL130W PRY2P36110 329 aa12.57□□□□□ -0.4
RPP1BYDL130W UBP8P50102 471 aa12.57□□□□□ -0.4
RPP1BYDL130W YDL086WQ07505 273 aa12.57□□□□□ -0.4
RPP1BYDL130W AEP3Q12089 606 aa12.57□□□□□ -0.4
RPP1BYDL130W QCR2P07257 368 aa12.56□□□□□ -0.4
RPP1BYDL130W YER190C-BP0CX94 160 aa12.56□□□□□ -0.4
RPP1BYDL130W YEL077W-AP0CX95 160 aa12.56□□□□□ -0.4
RPP1BYDL130W YGR296C-BP0CX96 160 aa12.56□□□□□ -0.4
RPP1BYDL130W YPL283W-BP0CX97 160 aa12.56□□□□□ -0.4
RPP1BYDL130W YPR204C-AP0CX98 160 aa12.56□□□□□ -0.4
RPP1BYDL130W YFL068WP0CX99 160 aa12.56□□□□□ -0.4
RPP1BYDL130W YLL066W-AP0CY00 160 aa12.56□□□□□ -0.4
RPP1BYDL130W YLL067W-AP0CY01 160 aa12.56□□□□□ -0.4
RPP1BYDL130W MRP17P28778 131 aa12.55□□□□□ -0.4
RPP1BYDL130W NPL6P32832 435 aa12.55□□□□□ -0.4
RPP1BYDL130W NIF3P53081 288 aa12.55□□□□□ -0.4
RPP1BYDL130W MCH1Q07376 486 aa12.55□□□□□ -0.4
RPP1BYDL130W FEX2Q08991 375 aa12.55□□□□□ -0.4
RPP1BYDL130W YGR035W-AQ45U48 73 aa12.55□□□□□ -0.4
RPP1BYDL130W VPS63O13549 108 aa12.54□□□□□ -0.4
RPP1BYDL130W SPG4Q04438 115 aa12.54□□□□□ -0.4
RPP1BYDL130W SUA5P32579 426 aa12.53□□□□□ -0.4
RPP1BYDL130W ICS2P38284 255 aa12.53□□□□□ -0.4
RPP1BYDL130W LSM12P38828 187 aaKnown RBP12.53□□□□□ -0.4
RPP1BYDL130W BFR1P38934 470 aaKnown RBP RIP-Chip data12.53□□□□□ -0.4not detected
RPP1BYDL130W PAM18Q07914 168 aa12.53□□□□□ -0.4
RPP1BYDL130W HBN1Q96VH4 193 aa12.53□□□□□ -0.4
RPP1BYDL130W HTB1P02293 131 aaKnown RBP12.51□□□□□ -0.41
RPP1BYDL130W ERV15P38312 142 aa12.51□□□□□ -0.41
RPP1BYDL130W PHM8P40025 321 aa12.51□□□□□ -0.41
RPP1BYDL130W MRPS16Q02608 121 aa12.51□□□□□ -0.41
RPP1BYDL130W TFB5Q3E7C1 72 aaPredicted RBP12.51□□□□□ -0.41
RPP1BYDL130W PRS4P38063 326 aaPredicted RBP12.5□□□□□ -0.41
RPP1BYDL130W WWM1P43582 211 aaKnown RBP12.5□□□□□ -0.41
RPP1BYDL130W FEX1Q08913 375 aa12.5□□□□□ -0.41
RPP1BYDL130W YCT1Q12235 531 aa12.5□□□□□ -0.41
RPP1BYDL130W PRM4Q12498 284 aa12.5□□□□□ -0.41
RPP1BYDL130W INO2P26798 304 aa12.49□□□□□ -0.41
RPP1BYDL130W FSH2Q05015 223 aa12.49□□□□□ -0.41
RPP1BYDL130W NDE2Q07500 545 aa12.49□□□□□ -0.41
RPP1BYDL130W YNG1Q08465 219 aa12.49□□□□□ -0.41
RPP1BYDL130W ATG31Q12421 196 aa12.49□□□□□ -0.41
RPP1BYDL130W TPI1P00942 248 aaKnown RBP12.48□□□□□ -0.41
RPP1BYDL130W ILV5P06168 395 aaKnown RBP12.48□□□□□ -0.41
RPP1BYDL130W YKR045CP36138 183 aa12.48□□□□□ -0.41
RPP1BYDL130W VPS28Q02767 242 aa12.48□□□□□ -0.41
RPP1BYDL130W ATG5Q12380 294 aa12.48□□□□□ -0.41
RPP1BYDL130W ARG80P07249 177 aa12.47□□□□□ -0.41
RPP1BYDL130W YKL075CP36083 450 aa12.47□□□□□ -0.41
RPP1BYDL130W ATP3P38077 311 aaKnown RBP12.47□□□□□ -0.41
RPP1BYDL130W CRH1P53301 507 aa12.47□□□□□ -0.41
RPP1BYDL130W YJR112W-AQ3E743 109 aa12.47□□□□□ -0.41
RPP1BYDL130W YBR255C-AQ3E776 120 aa12.47□□□□□ -0.41
RPP1BYDL130W NOP1P15646 327 aaKnown RBP12.46□□□□□ -0.41
RPP1BYDL130W GEP4P38812 185 aa12.46□□□□□ -0.41
RPP1BYDL130W AGE2P40529 298 aa12.46□□□□□ -0.41
RPP1BYDL130W YGR210CP42942 411 aa12.46□□□□□ -0.41
RPP1BYDL130W YJL163CP46996 555 aa12.46□□□□□ -0.41
RPP1BYDL130W YJR012CP47087 207 aa12.46□□□□□ -0.41
RPP1BYDL130W ARP3P47117 449 aaKnown RBP12.46□□□□□ -0.41
RPP1BYDL130W PUT1P09368 476 aa12.45□□□□□ -0.42
RPP1BYDL130W GPP2P40106 250 aaKnown RBP12.45□□□□□ -0.42
RPP1BYDL130W YJL213WP40896 331 aa12.45□□□□□ -0.42
RPP1BYDL130W FIP1P45976 327 aa12.44□□□□□ -0.42
RPP1BYDL130W YIR035CP40579 254 aa12.43□□□□□ -0.42
RPP1BYDL130W VPS55P47111 140 aa12.43□□□□□ -0.42
RPP1BYDL130W HOR7Q05827 59 aa12.43□□□□□ -0.42
RPP1BYDL130W YPC1P38298 316 aa12.42□□□□□ -0.42
RPP1BYDL130W HED1Q03937 162 aa12.42□□□□□ -0.42
RPP1BYDL130W YBR184WP38299 523 aa12.41□□□□□ -0.42
RPP1BYDL130W RFC2P40348 353 aa12.41□□□□□ -0.42
RPP1BYDL130W RPA14P50106 137 aa12.41□□□□□ -0.42
RPP1BYDL130W YGL258W-AQ3E740 77 aa12.41□□□□□ -0.42
RPP1BYDL130W DFG10P40526 253 aa12.4□□□□□ -0.42
RPP1BYDL130W SSU72P53538 206 aaPredicted RBP12.4□□□□□ -0.42
RPP1BYDL130W MSO1P53604 210 aaKnown RBP12.4□□□□□ -0.42
RPP1BYDL130W RKI1Q12189 258 aa12.4□□□□□ -0.42
RPP1BYDL130W SCM3Q12334 223 aa12.4□□□□□ -0.42
RPP1BYDL130W RPL13BP40212 199 aaKnown RBP12.39□□□□□ -0.43
RPP1BYDL130W LST8P41318 303 aa12.39□□□□□ -0.43
RPP1BYDL130W MRPL23Q12487 163 aaPredicted RBP12.39□□□□□ -0.43
RPP1BYDL130W RPL13AQ12690 199 aaPredicted RBP12.39□□□□□ -0.43
RPP1BYDL130W TRP4P07285 380 aaPredicted RBP12.38□□□□□ -0.43
RPP1BYDL130W RPD3P32561 433 aa12.38□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 284.7 ms