RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W IRC24P40580 263 aa6.06□□□□□ -1.44
NUP84YDL116W CTK2P46962 323 aa6.06□□□□□ -1.44
NUP84YDL116W RPA34P47006 233 aaPredicted RBP6.06□□□□□ -1.44
NUP84YDL116W MGA1P53050 456 aa6.06□□□□□ -1.44
NUP84YDL116W YGR045CP53229 120 aa6.06□□□□□ -1.44
NUP84YDL116W HRI1Q05905 244 aaKnown RBP6.06□□□□□ -1.44
NUP84YDL116W FRQ1Q06389 190 aa6.06□□□□□ -1.44
NUP84YDL116W YPR147CQ06522 304 aaKnown RBP6.06□□□□□ -1.44
NUP84YDL116W IRC19Q07843 230 aa6.06□□□□□ -1.44
NUP84YDL116W IRC13Q08630 104 aa6.06□□□□□ -1.44
NUP84YDL116W ERV2Q12284 196 aa6.06□□□□□ -1.44
NUP84YDL116W DIF1O13577 133 aa6.06□□□□□ -1.44
NUP84YDL116W CKA1P15790 372 aa6.06□□□□□ -1.44
NUP84YDL116W MIG1P27705 504 aa6.06□□□□□ -1.44
NUP84YDL116W WSC4P38739 605 aa6.06□□□□□ -1.44
NUP84YDL116W YNR066CP53752 436 aa6.06□□□□□ -1.44
NUP84YDL116W YDR286CQ05530 114 aa6.06□□□□□ -1.44
NUP84YDL116W PRR2Q12310 699 aa6.06□□□□□ -1.44
NUP84YDL116W YHR214C-EQ8TGK0 99 aa6.06□□□□□ -1.44
NUP84YDL116W TAO3P40468 2376 aa6.05□□□□□ -1.44
NUP84YDL116W YMR084WA2P2R3 262 aa6.05□□□□□ -1.44
NUP84YDL116W YLR358CO13565 187 aa6.05□□□□□ -1.44
NUP84YDL116W TRP4P07285 380 aaPredicted RBP6.05□□□□□ -1.44
NUP84YDL116W CDC26P14724 124 aa6.05□□□□□ -1.44
NUP84YDL116W OCH1P31755 480 aa6.05□□□□□ -1.44
NUP84YDL116W DAD2P36162 133 aa6.05□□□□□ -1.44
NUP84YDL116W SHG1P38337 142 aa6.05□□□□□ -1.44
NUP84YDL116W YER010CP40011 234 aa6.05□□□□□ -1.44
NUP84YDL116W SHO1P40073 367 aa6.05□□□□□ -1.44
NUP84YDL116W LTP1P40347 161 aa6.05□□□□□ -1.44
NUP84YDL116W RSM23Q01163 450 aa6.05□□□□□ -1.44
NUP84YDL116W DIC1Q06143 298 aa6.05□□□□□ -1.44
NUP84YDL116W RDL2Q08742 149 aaKnown RBP6.05□□□□□ -1.44
NUP84YDL116W SWT1Q12104 458 aa6.05□□□□□ -1.44
NUP84YDL116W YIL002W-AQ3E7Z5 69 aa6.05□□□□□ -1.44
NUP84YDL116W YGL010WP25338 174 aa6.04□□□□□ -1.44
NUP84YDL116W NSA2P40078 261 aaKnown RBP6.04□□□□□ -1.44
NUP84YDL116W SHR5P41912 237 aa6.04□□□□□ -1.44
NUP84YDL116W NAT3Q06504 195 aa6.04□□□□□ -1.44
NUP84YDL116W ARR3Q06598 404 aa6.04□□□□□ -1.44
NUP84YDL116W YBR255C-AQ3E776 120 aa6.04□□□□□ -1.44
NUP84YDL116W ACC1Q00955 2233 aaKnown RBP6.04□□□□□ -1.44
NUP84YDL116W SCEIP03882 235 aa6.04□□□□□ -1.44
NUP84YDL116W YPT31P38555 223 aaKnown RBP6.04□□□□□ -1.44
NUP84YDL116W PAU4P53427 120 aa6.04□□□□□ -1.44
NUP84YDL116W ELA1P53861 379 aaPredicted RBP6.04□□□□□ -1.44
NUP84YDL116W SWS2P53937 143 aa6.04□□□□□ -1.44
NUP84YDL116W YLR460CP54007 376 aa6.04□□□□□ -1.44
NUP84YDL116W RCE1Q03530 315 aa6.04□□□□□ -1.44
NUP84YDL116W AKR2Q12013 749 aa6.04□□□□□ -1.44
NUP84YDL116W MRPS9P38120 278 aa6.03□□□□□ -1.44
NUP84YDL116W SWD3P38123 315 aa6.03□□□□□ -1.44
NUP84YDL116W SLM6P38343 150 aa6.03□□□□□ -1.44
NUP84YDL116W PHS1P40857 217 aa6.03□□□□□ -1.44
NUP84YDL116W ATG27P46989 271 aa6.03□□□□□ -1.44
NUP84YDL116W SUN4P53616 420 aa6.03□□□□□ -1.44
NUP84YDL116W YMR007WQ03675 126 aa6.03□□□□□ -1.44
NUP84YDL116W YFH1Q07540 174 aa6.03□□□□□ -1.44
NUP84YDL116W PAU1P0CE88 120 aa6.03□□□□□ -1.44
NUP84YDL116W PAU14P0CE89 120 aa6.03□□□□□ -1.44
NUP84YDL116W PAU6P0CE90 120 aa6.03□□□□□ -1.44
NUP84YDL116W PAU18P0CE91 120 aa6.03□□□□□ -1.44
NUP84YDL116W PAU8P0CE92 120 aa6.03□□□□□ -1.44
NUP84YDL116W PAU11P0CE93 120 aa6.03□□□□□ -1.44
NUP84YDL116W URA5P13298 226 aaKnown RBP6.03□□□□□ -1.44
NUP84YDL116W YCR006CP25350 157 aa6.03□□□□□ -1.44
NUP84YDL116W RFA3P26755 122 aaKnown RBP6.03□□□□□ -1.44
NUP84YDL116W CWP1P28319 239 aa6.03□□□□□ -1.44
NUP84YDL116W AHT1P29589 182 aa6.03□□□□□ -1.44
NUP84YDL116W SRX1P36077 127 aa6.03□□□□□ -1.44
NUP84YDL116W YBR090CP38253 122 aa6.03□□□□□ -1.44
NUP84YDL116W PAU13P38725 120 aa6.03□□□□□ -1.44
NUP84YDL116W HUA1P40325 198 aa6.03□□□□□ -1.44
NUP84YDL116W XPT1P47165 209 aa6.03□□□□□ -1.44
NUP84YDL116W DAD3P69850 94 aa6.03□□□□□ -1.44
NUP84YDL116W PAU10Q03050 120 aa6.03□□□□□ -1.44
NUP84YDL116W RSM10Q03201 203 aa6.03□□□□□ -1.44
NUP84YDL116W PAU20Q08322 120 aa6.03□□□□□ -1.44
NUP84YDL116W NAT5Q08689 176 aa6.03□□□□□ -1.44
NUP84YDL116W PAU9Q3E770 120 aa6.03□□□□□ -1.44
NUP84YDL116W YCL001W-BQ96VH2 84 aa6.03□□□□□ -1.44
NUP84YDL116W CDC39P25655 2108 aaKnown RBP6.03□□□□□ -1.44
NUP84YDL116W CDC36P06100 191 aaPredicted RBP6.02□□□□□ -1.45
NUP84YDL116W DFR1P07807 211 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
NUP84YDL116W STE4P18851 423 aa6.02□□□□□ -1.45
NUP84YDL116W LSB5P25369 354 aa6.02□□□□□ -1.45
NUP84YDL116W RPB7P34087 171 aa6.02□□□□□ -1.45
NUP84YDL116W CUE1P38428 203 aa6.02□□□□□ -1.45
NUP84YDL116W BAT1P38891 393 aaKnown RBP6.02□□□□□ -1.45
NUP84YDL116W YIL163CP40448 117 aa6.02□□□□□ -1.45
NUP84YDL116W PAU5P43575 122 aa6.02□□□□□ -1.45
NUP84YDL116W LST7P53237 242 aa6.02□□□□□ -1.45
NUP84YDL116W YLR118CQ12354 227 aa6.02□□□□□ -1.45
NUP84YDL116W POR1P04840 283 aaKnown RBP6.01□□□□□ -1.45
NUP84YDL116W AIM17P23180 465 aaKnown RBP6.01□□□□□ -1.45
NUP84YDL116W EHD3P28817 500 aa6.01□□□□□ -1.45
NUP84YDL116W PHD1P36093 366 aa6.01□□□□□ -1.45
NUP84YDL116W YBR292CP38357 123 aa6.01□□□□□ -1.45
NUP84YDL116W YMR262WP38430 313 aa6.01□□□□□ -1.45
NUP84YDL116W WSS1P38838 269 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms