RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C YHR125WP38831 101 aa1.24□□□□□ -2.21
ASM4YDL088C GLE2P40066 365 aa1.24□□□□□ -2.21
ASM4YDL088C YER121WP40076 114 aa1.24□□□□□ -2.21
ASM4YDL088C MRPL49P40858 161 aaPredicted RBP1.24□□□□□ -2.21
ASM4YDL088C RPL9BP51401 191 aaKnown RBP1.24□□□□□ -2.21
ASM4YDL088C RRP17Q04031 235 aaPredicted RBP1.24□□□□□ -2.21
ASM4YDL088C ATG39Q06159 398 aa1.24□□□□□ -2.21
ASM4YDL088C YLR053CQ12026 108 aa1.24□□□□□ -2.21
ASM4YDL088C YPL162CQ12042 273 aa1.24□□□□□ -2.21
ASM4YDL088C NSL1Q12143 216 aa1.24□□□□□ -2.21
ASM4YDL088C TSC3Q3E790 80 aa1.24□□□□□ -2.21
ASM4YDL088C CMD1P06787 147 aaKnown RBP1.23□□□□□ -2.21
ASM4YDL088C RAD10P06838 210 aa1.23□□□□□ -2.21
ASM4YDL088C DPM1P14020 267 aaKnown RBP1.23□□□□□ -2.21
ASM4YDL088C RPB3P16370 318 aaKnown RBP1.23□□□□□ -2.21
ASM4YDL088C PET9P18239 318 aaKnown RBP1.23□□□□□ -2.21
ASM4YDL088C BET1P22804 142 aa1.23□□□□□ -2.21
ASM4YDL088C TRX3P25372 127 aa1.23□□□□□ -2.21
ASM4YDL088C MEI4P29467 408 aa1.23□□□□□ -2.21
ASM4YDL088C SEC17P32602 292 aa1.23□□□□□ -2.21
ASM4YDL088C SRP102P36057 244 aaPredicted RBP1.23□□□□□ -2.21
ASM4YDL088C YKE4P40544 346 aa1.23□□□□□ -2.21
ASM4YDL088C ARP3P47117 449 aaKnown RBP1.23□□□□□ -2.21
ASM4YDL088C COS6P53344 381 aa1.23□□□□□ -2.21
ASM4YDL088C DYN3Q04949 312 aa1.23□□□□□ -2.21
ASM4YDL088C SHH4Q06236 168 aa1.23□□□□□ -2.21
ASM4YDL088C YOR268CQ08734 132 aa1.23□□□□□ -2.21
ASM4YDL088C AKR2Q12013 749 aa1.23□□□□□ -2.21
ASM4YDL088C YPR014CQ6B0W2 109 aa1.23□□□□□ -2.21
ASM4YDL088C YHR214C-EQ8TGK0 99 aa1.23□□□□□ -2.21
ASM4YDL088C SAS5Q99314 248 aa1.23□□□□□ -2.21
ASM4YDL088C RPS24AP0CX31 135 aaKnown RBP1.22□□□□□ -2.21
ASM4YDL088C RPS24BP0CX32 135 aaKnown RBP1.22□□□□□ -2.21
ASM4YDL088C CKS1P20486 150 aaKnown RBP1.22□□□□□ -2.21
ASM4YDL088C OCH1P31755 480 aa1.22□□□□□ -2.21
ASM4YDL088C SCM4P32564 187 aa1.22□□□□□ -2.21
ASM4YDL088C UTP30P36144 274 aaKnown RBP1.22□□□□□ -2.21
ASM4YDL088C YER076CP40049 302 aa1.22□□□□□ -2.21
ASM4YDL088C ICE2P40499 491 aa1.22□□□□□ -2.21
ASM4YDL088C LSM1P47017 172 aaKnown RBP1.22□□□□□ -2.21
ASM4YDL088C TDA4P47153 279 aa1.22□□□□□ -2.21
ASM4YDL088C XPT1P47165 209 aa1.22□□□□□ -2.21
ASM4YDL088C AIF1P52923 378 aa1.22□□□□□ -2.21
ASM4YDL088C ARO8P53090 500 aaKnown RBP1.22□□□□□ -2.21
ASM4YDL088C PGA1P53896 198 aa1.22□□□□□ -2.21
ASM4YDL088C SLM2P53955 656 aa1.22□□□□□ -2.21
ASM4YDL088C TMA20P89886 181 aaPredicted RBP1.22□□□□□ -2.21
ASM4YDL088C SWP1Q02795 286 aa1.22□□□□□ -2.21
ASM4YDL088C MAK3Q03503 176 aa1.22□□□□□ -2.21
ASM4YDL088C GAS3Q03655 524 aa1.22□□□□□ -2.21
ASM4YDL088C AIM34Q03673 198 aa1.22□□□□□ -2.21
ASM4YDL088C HNT1Q04344 158 aaKnown RBP1.22□□□□□ -2.21
ASM4YDL088C YOL160WQ08321 113 aa1.22□□□□□ -2.21
ASM4YDL088C MCP1Q12106 302 aa1.22□□□□□ -2.21
ASM4YDL088C MPD1Q12404 318 aaKnown RBP1.22□□□□□ -2.21
ASM4YDL088C RDI1Q12434 202 aa1.22□□□□□ -2.21
ASM4YDL088C MHT1Q12525 324 aa1.22□□□□□ -2.21
ASM4YDL088C TDA8Q6B2U8 126 aa1.22□□□□□ -2.21
ASM4YDL088C CDC8P00572 216 aa1.21□□□□□ -2.22
ASM4YDL088C YLR156WP0CE96 114 aa1.21□□□□□ -2.22
ASM4YDL088C YLR159WP0CE97 114 aa1.21□□□□□ -2.22
ASM4YDL088C YLR161WP0CE98 114 aa1.21□□□□□ -2.22
ASM4YDL088C AHC2P25649 128 aa1.21□□□□□ -2.22
ASM4YDL088C ACP1P32463 125 aa1.21□□□□□ -2.22
ASM4YDL088C VMA11P32842 164 aa1.21□□□□□ -2.22
ASM4YDL088C DER1P38307 211 aa1.21□□□□□ -2.22
ASM4YDL088C CTR2P38865 189 aa1.21□□□□□ -2.22
ASM4YDL088C AIM2P39721 246 aa1.21□□□□□ -2.22
ASM4YDL088C GON7P46984 123 aa1.21□□□□□ -2.22
ASM4YDL088C SNX4P47057 423 aa1.21□□□□□ -2.22
ASM4YDL088C GPI17Q04080 534 aa1.21□□□□□ -2.22
ASM4YDL088C BRX1Q08235 291 aaKnown RBP1.21□□□□□ -2.22
ASM4YDL088C PEX11Q12462 236 aa1.21□□□□□ -2.22
ASM4YDL088C EFG1Q3E705 233 aaKnown RBP1.21□□□□□ -2.22
ASM4YDL088C ODC2Q99297 307 aa1.21□□□□□ -2.22
ASM4YDL088C PET20Q99373 253 aa1.21□□□□□ -2.22
ASM4YDL088C TAF2P23255 1407 aa1.21□□□□□ -2.22
ASM4YDL088C MSW1P04803 379 aa1.21□□□□□ -2.22
ASM4YDL088C CPA1P07258 411 aaKnown RBP1.21□□□□□ -2.22
ASM4YDL088C SPO13P23624 291 aa1.21□□□□□ -2.22
ASM4YDL088C YCR090CP25654 182 aaKnown RBP1.21□□□□□ -2.22
ASM4YDL088C YKL102CP34249 101 aa1.21□□□□□ -2.22
ASM4YDL088C UMP1P38293 148 aa1.21□□□□□ -2.22
ASM4YDL088C YHL026CP38740 315 aa1.21□□□□□ -2.22
ASM4YDL088C NSG1P38837 291 aa1.21□□□□□ -2.22
ASM4YDL088C EDC3P39998 551 aaKnown RBP1.21□□□□□ -2.22
ASM4YDL088C YER134CP40081 178 aa1.21□□□□□ -2.22
ASM4YDL088C SMD3P43321 101 aaKnown RBP1.21□□□□□ -2.22
ASM4YDL088C YFH7P43591 353 aa1.21□□□□□ -2.22
ASM4YDL088C MOG1P47123 218 aa1.21□□□□□ -2.22
ASM4YDL088C SBH2P52871 88 aa1.21□□□□□ -2.22
ASM4YDL088C CAB4P53332 305 aa1.21□□□□□ -2.22
ASM4YDL088C TRM12Q04235 462 aa1.21□□□□□ -2.22
ASM4YDL088C ARR2Q06597 130 aa1.21□□□□□ -2.22
ASM4YDL088C DGA1Q08650 418 aa1.21□□□□□ -2.22
ASM4YDL088C YLR412C-AQ3E742 68 aa1.21□□□□□ -2.22
ASM4YDL088C SNC2P33328 115 aa1.2□□□□□ -2.22
ASM4YDL088C NUF2P33895 451 aa1.2□□□□□ -2.22
ASM4YDL088C SHE2P36068 246 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
ASM4YDL088C MRPL17P36528 281 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms