RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W YER079WP40052 210 aaKnown RBP3.58□□□□□ -1.84
RER1YCL001W YFL067WP43537 175 aa3.58□□□□□ -1.84
RER1YCL001W RBL2P48606 106 aaKnown RBP3.58□□□□□ -1.84
RER1YCL001W YNR064CP53750 290 aa3.58□□□□□ -1.84
RER1YCL001W SPO19Q03029 223 aa3.58□□□□□ -1.84
RER1YCL001W MAK3Q03503 176 aa3.58□□□□□ -1.84
RER1YCL001W HEM25Q07534 307 aa3.58□□□□□ -1.84
RER1YCL001W YLR099W-AQ3E798 87 aa3.58□□□□□ -1.84
RER1YCL001W CCW14O13547 238 aa3.57□□□□□ -1.84
RER1YCL001W HIS3P06633 220 aa3.57□□□□□ -1.84
RER1YCL001W ADK1P07170 222 aaKnown RBP3.57□□□□□ -1.84
RER1YCL001W PET18P25362 215 aa3.57□□□□□ -1.84
RER1YCL001W PEX4P29340 183 aa3.57□□□□□ -1.84
RER1YCL001W IES6P32617 166 aa3.57□□□□□ -1.84
RER1YCL001W YER188WP40103 239 aa3.57□□□□□ -1.84
RER1YCL001W SLM1P40485 686 aa3.57□□□□□ -1.84
RER1YCL001W SYS1P41544 203 aa3.57□□□□□ -1.84
RER1YCL001W PAM16P42949 149 aa3.57□□□□□ -1.84
RER1YCL001W YHC3P47040 408 aa3.57□□□□□ -1.84
RER1YCL001W OCA2P53949 197 aa3.57□□□□□ -1.84
RER1YCL001W PRP3Q03338 469 aaPredicted RBP3.57□□□□□ -1.84
RER1YCL001W NMA1Q06178 401 aaKnown RBP3.57□□□□□ -1.84
RER1YCL001W ATG17Q06410 417 aa3.57□□□□□ -1.84
RER1YCL001W FCY22Q12119 530 aa3.57□□□□□ -1.84
RER1YCL001W YMR105W-AQ8TGS8 64 aa3.57□□□□□ -1.84
RER1YCL001W ILV5P06168 395 aaKnown RBP3.56□□□□□ -1.84
RER1YCL001W YCR101CP25607 182 aa3.56□□□□□ -1.84
RER1YCL001W ARO7P32178 256 aa3.56□□□□□ -1.84
RER1YCL001W ARO4P32449 370 aaKnown RBP3.56□□□□□ -1.84
RER1YCL001W TCA17P32613 152 aa3.56□□□□□ -1.84
RER1YCL001W TMA19P35691 167 aaKnown RBP3.56□□□□□ -1.84
RER1YCL001W SHE2P36068 246 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
RER1YCL001W SWD2P36104 329 aaPredicted RBP3.56□□□□□ -1.84
RER1YCL001W RIB5P38145 238 aa3.56□□□□□ -1.84
RER1YCL001W MIX23P38162 196 aa3.56□□□□□ -1.84
RER1YCL001W UMP1P38293 148 aa3.56□□□□□ -1.84
RER1YCL001W CCS1P40202 249 aaKnown RBP3.56□□□□□ -1.84
RER1YCL001W MRX5P47007 382 aa3.56□□□□□ -1.84
RER1YCL001W EFM3P47163 339 aa3.56□□□□□ -1.84
RER1YCL001W UFD1P53044 361 aa3.56□□□□□ -1.84
RER1YCL001W DOC1P53068 250 aa3.56□□□□□ -1.84
RER1YCL001W TDA1Q03533 586 aa3.56□□□□□ -1.84
RER1YCL001W ECM18Q04623 453 aa3.56□□□□□ -1.84
RER1YCL001W UPS1Q05776 175 aa3.56□□□□□ -1.84
RER1YCL001W LIP2Q06005 328 aa3.56□□□□□ -1.84
RER1YCL001W GPN3Q06543 272 aa3.56□□□□□ -1.84
RER1YCL001W MRPL35Q06678 367 aa3.56□□□□□ -1.84
RER1YCL001W PRP11Q07350 266 aaPredicted RBP3.56□□□□□ -1.84
RER1YCL001W MPD1Q12404 318 aaKnown RBP3.56□□□□□ -1.84
RER1YCL001W HUT1Q12520 339 aa3.56□□□□□ -1.84
RER1YCL001W RPL25P04456 142 aaKnown RBP3.55□□□□□ -1.84
RER1YCL001W MRPS28P21771 286 aa3.55□□□□□ -1.84
RER1YCL001W RFA3P26755 122 aaKnown RBP3.55□□□□□ -1.84
RER1YCL001W IMP1P28627 190 aa3.55□□□□□ -1.84
RER1YCL001W CPR5P35176 225 aa3.55□□□□□ -1.84
RER1YCL001W PRS2P38620 318 aaKnown RBP3.55□□□□□ -1.84
RER1YCL001W RTT105P40063 208 aa3.55□□□□□ -1.84
RER1YCL001W PRM5P40476 318 aa3.55□□□□□ -1.84
RER1YCL001W APJ1P53940 528 aa3.55□□□□□ -1.84
RER1YCL001W GPI15P53961 229 aa3.55□□□□□ -1.84
RER1YCL001W BET5Q03630 159 aa3.55□□□□□ -1.84
RER1YCL001W UTP15Q04305 513 aaKnown RBP3.55□□□□□ -1.84
RER1YCL001W RIM9Q04734 239 aa3.55□□□□□ -1.84
RER1YCL001W ADH6Q04894 360 aaKnown RBP3.55□□□□□ -1.84
RER1YCL001W ARR2Q06597 130 aa3.55□□□□□ -1.84
RER1YCL001W MDM36Q06820 579 aa3.55□□□□□ -1.84
RER1YCL001W ASR1Q06834 288 aa3.55□□□□□ -1.84
RER1YCL001W YOR186WQ08560 144 aa3.55□□□□□ -1.84
RER1YCL001W AEP3Q12089 606 aa3.55□□□□□ -1.84
RER1YCL001W YOR029WQ12243 111 aa3.55□□□□□ -1.84
RER1YCL001W GPX2P38143 162 aa3.54□□□□□ -1.84
RER1YCL001W GNA1P43577 159 aaPredicted RBP3.54□□□□□ -1.84
RER1YCL001W GPI14P47088 403 aaKnown RBP3.54□□□□□ -1.84
RER1YCL001W MRH4P53166 561 aa3.54□□□□□ -1.84
RER1YCL001W YMR181CQ03231 154 aa3.54□□□□□ -1.84
RER1YCL001W YDR114CQ04597 100 aa3.54□□□□□ -1.84
RER1YCL001W IRC25Q07951 179 aa3.54□□□□□ -1.84
RER1YCL001W ATG41Q12048 136 aa3.54□□□□□ -1.84
RER1YCL001W MSH5Q12175 901 aa3.54□□□□□ -1.84
RER1YCL001W TIR4Q12218 487 aaPredicted RBP3.54□□□□□ -1.84
RER1YCL001W EAF3Q12432 401 aa3.54□□□□□ -1.84
RER1YCL001W RPL24BP24000 155 aaKnown RBP3.53□□□□□ -1.84
RER1YCL001W IFM1P25038 676 aa3.53□□□□□ -1.84
RER1YCL001W CPR4P25334 318 aa3.53□□□□□ -1.84
RER1YCL001W ATG22P25568 528 aa3.53□□□□□ -1.84
RER1YCL001W YKL063CP35725 167 aa3.53□□□□□ -1.84
RER1YCL001W MBA1P38300 278 aa3.53□□□□□ -1.84
RER1YCL001W VHS2P40463 436 aa3.53□□□□□ -1.84
RER1YCL001W WWM1P43582 211 aaKnown RBP3.53□□□□□ -1.84
RER1YCL001W PIR5P46999 287 aa3.53□□□□□ -1.84
RER1YCL001W BXI1P48558 297 aa3.53□□□□□ -1.84
RER1YCL001W DIE2P50076 525 aa3.53□□□□□ -1.84
RER1YCL001W YGL114WP53134 725 aa3.53□□□□□ -1.84
RER1YCL001W OKP1P53298 406 aa3.53□□□□□ -1.84
RER1YCL001W CTF19Q02732 369 aa3.53□□□□□ -1.84
RER1YCL001W HNT1Q04344 158 aaKnown RBP3.53□□□□□ -1.84
RER1YCL001W YLR283WQ05867 314 aa3.53□□□□□ -1.84
RER1YCL001W MSA1Q08471 629 aa3.53□□□□□ -1.84
RER1YCL001W RPS18AP0CX55 146 aaKnown RBP3.52□□□□□ -1.85
RER1YCL001W RPS18BP0CX56 146 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms