RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C PUS4P48567 403 aaKnown RBP5.92□□□□□ -1.46
TDP1YBR223C PAU4P53427 120 aa5.92□□□□□ -1.46
TDP1YBR223C ALG12P53730 551 aa5.92□□□□□ -1.46
TDP1YBR223C PDR17P53844 350 aa5.92□□□□□ -1.46
TDP1YBR223C YDR209CQ03480 137 aa5.92□□□□□ -1.46
TDP1YBR223C NCE102Q12207 173 aaRIP-Chip data5.92□□□□□ -1.46not detected
TDP1YBR223C PRR2Q12310 699 aa5.92□□□□□ -1.46
TDP1YBR223C WHI5Q12416 295 aa5.92□□□□□ -1.46
TDP1YBR223C YOR192C-CQ3E736 78 aa5.92□□□□□ -1.46
TDP1YBR223C Q0144Q9ZZW2 109 aa5.92□□□□□ -1.46
TDP1YBR223C CDC39P25655 2108 aaKnown RBP5.92□□□□□ -1.46
TDP1YBR223C RPL7AP05737 244 aaKnown RBP5.92□□□□□ -1.46
TDP1YBR223C SPO13P23624 291 aa5.92□□□□□ -1.46
TDP1YBR223C YCR025CP25352 136 aa5.92□□□□□ -1.46
TDP1YBR223C YNK1P36010 153 aaKnown RBP5.92□□□□□ -1.46
TDP1YBR223C MRPL39P36533 70 aa5.92□□□□□ -1.46
TDP1YBR223C FLX1P40464 311 aa5.92□□□□□ -1.46
TDP1YBR223C RTS2P40962 232 aa5.92□□□□□ -1.46
TDP1YBR223C MGA1P53050 456 aa5.92□□□□□ -1.46
TDP1YBR223C YAP1802P53309 568 aa5.92□□□□□ -1.46
TDP1YBR223C RSM10Q03201 203 aa5.92□□□□□ -1.46
TDP1YBR223C YLR179CQ06252 201 aaKnown RBP5.92□□□□□ -1.46
TDP1YBR223C YPL264CQ08980 353 aa5.92□□□□□ -1.46
TDP1YBR223C SWT1Q12104 458 aa5.92□□□□□ -1.46
TDP1YBR223C RPL7BQ12213 244 aaKnown RBP5.92□□□□□ -1.46
TDP1YBR223C ATG5Q12380 294 aa5.92□□□□□ -1.46
TDP1YBR223C MPD1Q12404 318 aaKnown RBP5.92□□□□□ -1.46
TDP1YBR223C IMP1P28627 190 aa5.91□□□□□ -1.46
TDP1YBR223C YGL015CP33199 130 aa5.91□□□□□ -1.46
TDP1YBR223C MRPS9P38120 278 aa5.91□□□□□ -1.46
TDP1YBR223C TRS20P38334 175 aa5.91□□□□□ -1.46
TDP1YBR223C NOP16P40007 231 aaKnown RBP5.91□□□□□ -1.46
TDP1YBR223C PCL7P40186 285 aa5.91□□□□□ -1.46
TDP1YBR223C PHS1P40857 217 aa5.91□□□□□ -1.46
TDP1YBR223C OST1P41543 476 aaKnown RBP5.91□□□□□ -1.46
TDP1YBR223C BNS1P50084 137 aa5.91□□□□□ -1.46
TDP1YBR223C ATG4P53867 494 aa5.91□□□□□ -1.46
TDP1YBR223C YDR391CQ04170 232 aa5.91□□□□□ -1.46
TDP1YBR223C RIM9Q04734 239 aa5.91□□□□□ -1.46
TDP1YBR223C UPS1Q05776 175 aa5.91□□□□□ -1.46
TDP1YBR223C CRR1Q05790 422 aa5.91□□□□□ -1.46
TDP1YBR223C YPR098CQ06089 161 aa5.91□□□□□ -1.46
TDP1YBR223C PRP11Q07350 266 aaPredicted RBP5.91□□□□□ -1.46
TDP1YBR223C YOL118CQ08259 102 aa5.91□□□□□ -1.46
TDP1YBR223C YOR292CQ08743 309 aa5.91□□□□□ -1.46
TDP1YBR223C SEC16P48415 2195 aaKnown RBP5.9□□□□□ -1.46
TDP1YBR223C YDR157WA0A023PZE8 133 aa5.9□□□□□ -1.46
TDP1YBR223C PAU1P0CE88 120 aa5.9□□□□□ -1.46
TDP1YBR223C PAU14P0CE89 120 aa5.9□□□□□ -1.46
TDP1YBR223C PAU6P0CE90 120 aa5.9□□□□□ -1.46
TDP1YBR223C PAU18P0CE91 120 aa5.9□□□□□ -1.46
TDP1YBR223C PAU8P0CE92 120 aa5.9□□□□□ -1.46
TDP1YBR223C PAU11P0CE93 120 aa5.9□□□□□ -1.46
TDP1YBR223C CDC50P25656 391 aa5.9□□□□□ -1.46
TDP1YBR223C YBR013CP38215 129 aa5.9□□□□□ -1.46
TDP1YBR223C YPT31P38555 223 aaKnown RBP5.9□□□□□ -1.46
TDP1YBR223C PAU13P38725 120 aa5.9□□□□□ -1.46
TDP1YBR223C WSS1P38838 269 aa5.9□□□□□ -1.46
TDP1YBR223C PRM5P40476 318 aa5.9□□□□□ -1.46
TDP1YBR223C YGL114WP53134 725 aa5.9□□□□□ -1.46
TDP1YBR223C FYV6P53913 173 aa5.9□□□□□ -1.46
TDP1YBR223C PAU10Q03050 120 aa5.9□□□□□ -1.46
TDP1YBR223C RCE1Q03530 315 aa5.9□□□□□ -1.46
TDP1YBR223C PAU20Q08322 120 aa5.9□□□□□ -1.46
TDP1YBR223C PAU9Q3E770 120 aa5.9□□□□□ -1.46
TDP1YBR223C LSB5P25369 354 aa5.89□□□□□ -1.47
TDP1YBR223C AHT1P29589 182 aa5.89□□□□□ -1.47
TDP1YBR223C MRPS5P33759 307 aa5.89□□□□□ -1.47
TDP1YBR223C SSS1P35179 80 aa5.89□□□□□ -1.47
TDP1YBR223C MGE1P38523 228 aa5.89□□□□□ -1.47
TDP1YBR223C GEP7P53171 287 aa5.89□□□□□ -1.47
TDP1YBR223C ARL3Q02804 198 aa5.89□□□□□ -1.47
TDP1YBR223C CTR3Q06686 241 aa5.89□□□□□ -1.47
TDP1YBR223C YLR118CQ12354 227 aa5.89□□□□□ -1.47
TDP1YBR223C YBR255C-AQ3E776 120 aa5.89□□□□□ -1.47
TDP1YBR223C MIA40P36046 403 aa5.88□□□□□ -1.47
TDP1YBR223C UBS1P38290 277 aa5.88□□□□□ -1.47
TDP1YBR223C YER084WP40057 128 aa5.88□□□□□ -1.47
TDP1YBR223C PIG2P40187 538 aa5.88□□□□□ -1.47
TDP1YBR223C EGT2P42835 1041 aa5.88□□□□□ -1.47
TDP1YBR223C TAX4P47030 604 aa5.88□□□□□ -1.47
TDP1YBR223C TTI2P47168 421 aa5.88□□□□□ -1.47
TDP1YBR223C FIT3Q08907 204 aa5.88□□□□□ -1.47
TDP1YBR223C CSF1Q12150 2958 aa5.88□□□□□ -1.47
TDP1YBR223C ACC1Q00955 2233 aaKnown RBP5.88□□□□□ -1.47
TDP1YBR223C RPL35AP0CX84 120 aaKnown RBP5.88□□□□□ -1.47
TDP1YBR223C RPL35BP0CX85 120 aaKnown RBP5.88□□□□□ -1.47
TDP1YBR223C ALK2P32789 676 aaPredicted RBP5.88□□□□□ -1.47
TDP1YBR223C IMD2P38697 523 aaKnown RBP5.88□□□□□ -1.47
TDP1YBR223C MTC6P38849 526 aa5.88□□□□□ -1.47
TDP1YBR223C XPT1P47165 209 aa5.88□□□□□ -1.47
TDP1YBR223C TAF4P50105 388 aa5.88□□□□□ -1.47
TDP1YBR223C RIB4P50861 169 aaPredicted RBP5.88□□□□□ -1.47
TDP1YBR223C YGR050CP53231 118 aa5.88□□□□□ -1.47
TDP1YBR223C YNR040WP53736 256 aa5.88□□□□□ -1.47
TDP1YBR223C YPL077CQ02831 240 aa5.88□□□□□ -1.47
TDP1YBR223C HRD1Q08109 551 aa5.88□□□□□ -1.47
TDP1YBR223C RRS1Q08746 203 aaKnown RBP5.88□□□□□ -1.47
TDP1YBR223C YPR063CQ12160 140 aa5.88□□□□□ -1.47
TDP1YBR223C FCY2P17064 533 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms