RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W YGR042WP53227 271 aa3.39□□□□□ -1.87
CKS1YBR135W YPR098CQ06089 161 aa3.39□□□□□ -1.87
CKS1YBR135W YPR147CQ06522 304 aaKnown RBP3.39□□□□□ -1.87
CKS1YBR135W SWC7Q06707 132 aa3.39□□□□□ -1.87
CKS1YBR135W YET3Q07451 203 aa3.39□□□□□ -1.87
CKS1YBR135W RRS1Q08746 203 aaKnown RBP3.39□□□□□ -1.87
CKS1YBR135W YCT1Q12235 531 aa3.39□□□□□ -1.87
CKS1YBR135W ISD11Q6Q560 94 aa3.39□□□□□ -1.87
CKS1YBR135W YEL009C-AA0A023PZF2 135 aa3.38□□□□□ -1.87
CKS1YBR135W PUT1P09368 476 aa3.38□□□□□ -1.87
CKS1YBR135W DER1P38307 211 aa3.38□□□□□ -1.87
CKS1YBR135W CUE1P38428 203 aa3.38□□□□□ -1.87
CKS1YBR135W GOS1P38736 223 aa3.38□□□□□ -1.87
CKS1YBR135W TIM13P53299 105 aa3.38□□□□□ -1.87
CKS1YBR135W YOL019WQ08157 551 aa3.38□□□□□ -1.87
CKS1YBR135W YPS3Q12303 508 aa3.38□□□□□ -1.87
CKS1YBR135W MRX4Q12467 430 aa3.38□□□□□ -1.87
CKS1YBR135W NOT5Q12514 560 aaPredicted RBP3.38□□□□□ -1.87
CKS1YBR135W COX5AP00424 153 aa3.37□□□□□ -1.87
CKS1YBR135W YKR104WP0CE69 306 aa3.37□□□□□ -1.87
CKS1YBR135W CUP1-1P0CX80 61 aa3.37□□□□□ -1.87
CKS1YBR135W CUP1-2P0CX81 61 aa3.37□□□□□ -1.87
CKS1YBR135W PRE6P40303 254 aaKnown RBP3.37□□□□□ -1.87
CKS1YBR135W BMT5P40493 336 aa3.37□□□□□ -1.87
CKS1YBR135W YJL028WP47062 111 aa3.37□□□□□ -1.87
CKS1YBR135W ADO1P47143 340 aaKnown RBP3.37□□□□□ -1.87
CKS1YBR135W YJR141WP47172 347 aaPredicted RBP3.37□□□□□ -1.87
CKS1YBR135W SBH2P52871 88 aa3.37□□□□□ -1.87
CKS1YBR135W MGA1P53050 456 aa3.37□□□□□ -1.87
CKS1YBR135W YGL235WP53071 178 aa3.37□□□□□ -1.87
CKS1YBR135W YGL204CP53089 101 aa3.37□□□□□ -1.87
CKS1YBR135W YMR114CQ04471 368 aaKnown RBP3.37□□□□□ -1.87
CKS1YBR135W SPC24Q04477 213 aa3.37□□□□□ -1.87
CKS1YBR135W FCF1Q05498 189 aaPredicted RBP3.37□□□□□ -1.87
CKS1YBR135W ATG10Q07879 167 aa3.37□□□□□ -1.87
CKS1YBR135W SMT3Q12306 101 aaKnown RBP3.37□□□□□ -1.87
CKS1YBR135W TIM22Q12328 207 aa3.37□□□□□ -1.87
CKS1YBR135W OCA6Q12454 224 aa3.37□□□□□ -1.87
CKS1YBR135W PET20Q99373 253 aa3.37□□□□□ -1.87
CKS1YBR135W POL2P21951 2222 aaKnown RBP3.37□□□□□ -1.87
CKS1YBR135W BRR2P32639 2163 aaKnown RBP3.36□□□□□ -1.87
CKS1YBR135W RPL28P02406 149 aaKnown RBP3.36□□□□□ -1.87
CKS1YBR135W TOM40P23644 387 aaKnown RBP3.36□□□□□ -1.87
CKS1YBR135W YCR102CP25608 368 aa3.36□□□□□ -1.87
CKS1YBR135W TRR1P29509 319 aaKnown RBP3.36□□□□□ -1.87
CKS1YBR135W CAF4P36130 643 aa3.36□□□□□ -1.87
CKS1YBR135W SHG1P38337 142 aa3.36□□□□□ -1.87
CKS1YBR135W VMA10P48836 114 aaKnown RBP3.36□□□□□ -1.87
CKS1YBR135W MIC26P50087 233 aa3.36□□□□□ -1.87
CKS1YBR135W YLR460CP54007 376 aa3.36□□□□□ -1.87
CKS1YBR135W SNO1Q03144 224 aa3.36□□□□□ -1.87
CKS1YBR135W YDR114CQ04597 100 aa3.36□□□□□ -1.87
CKS1YBR135W JLP1Q12358 412 aa3.36□□□□□ -1.87
CKS1YBR135W DCN1Q12395 269 aa3.36□□□□□ -1.87
CKS1YBR135W YPL247CQ12523 523 aa3.36□□□□□ -1.87
CKS1YBR135W UBR1P19812 1950 aa3.36□□□□□ -1.87
CKS1YBR135W HIS3P06633 220 aa3.35□□□□□ -1.87
CKS1YBR135W RAD10P06838 210 aa3.35□□□□□ -1.87
CKS1YBR135W CPA1P07258 411 aaKnown RBP3.35□□□□□ -1.87
CKS1YBR135W RPS28BP0C0X0 67 aaKnown RBP3.35□□□□□ -1.87
CKS1YBR135W URA6P15700 204 aa3.35□□□□□ -1.87
CKS1YBR135W PPH21P23594 369 aa3.35□□□□□ -1.87
CKS1YBR135W SFC1P33303 322 aa3.35□□□□□ -1.87
CKS1YBR135W POP4P38336 279 aa3.35□□□□□ -1.87
CKS1YBR135W TEM1P38987 245 aa3.35□□□□□ -1.87
CKS1YBR135W SPO73P40031 143 aa3.35□□□□□ -1.87
CKS1YBR135W CIN5P40917 295 aa3.35□□□□□ -1.87
CKS1YBR135W YJR056CP47115 236 aa3.35□□□□□ -1.87
CKS1YBR135W MRH4P53166 561 aa3.35□□□□□ -1.87
CKS1YBR135W YGL034CP53186 121 aa3.35□□□□□ -1.87
CKS1YBR135W GTR2P53290 341 aa3.35□□□□□ -1.87
CKS1YBR135W EMI1Q04406 187 aa3.35□□□□□ -1.87
CKS1YBR135W SPG4Q04438 115 aa3.35□□□□□ -1.87
CKS1YBR135W YML096WQ04489 525 aa3.35□□□□□ -1.87
CKS1YBR135W YDR278CQ05612 105 aa3.35□□□□□ -1.87
CKS1YBR135W RRP40Q08285 240 aaKnown RBP3.35□□□□□ -1.87
CKS1YBR135W RPS28AQ3E7X9 67 aaPredicted RBP3.35□□□□□ -1.87
CKS1YBR135W CDC10P25342 322 aaKnown RBP3.34□□□□□ -1.87
CKS1YBR135W YKL075CP36083 450 aa3.34□□□□□ -1.87
CKS1YBR135W PRM10P42946 383 aa3.34□□□□□ -1.87
CKS1YBR135W CIS3P47001 227 aa3.34□□□□□ -1.87
CKS1YBR135W ALG13P53178 202 aa3.34□□□□□ -1.87
CKS1YBR135W NQM1P53228 333 aaPredicted RBP3.34□□□□□ -1.87
CKS1YBR135W RHO3Q00245 231 aaKnown RBP3.34□□□□□ -1.87
CKS1YBR135W YDR248CQ03786 193 aa3.34□□□□□ -1.87
CKS1YBR135W MET2P08465 486 aa3.33□□□□□ -1.88
CKS1YBR135W GCY1P14065 312 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
CKS1YBR135W CYC2P38909 366 aa3.33□□□□□ -1.88
CKS1YBR135W SNX4P47057 423 aa3.33□□□□□ -1.88
CKS1YBR135W NUP57P48837 541 aa3.33□□□□□ -1.88
CKS1YBR135W YDR124WQ04608 324 aa3.33□□□□□ -1.88
CKS1YBR135W VPS68Q12016 184 aa3.33□□□□□ -1.88
CKS1YBR135W YLR053CQ12026 108 aa3.33□□□□□ -1.88
CKS1YBR135W NSL1Q12143 216 aa3.33□□□□□ -1.88
CKS1YBR135W AGC1Q12482 902 aa3.33□□□□□ -1.88
CKS1YBR135W YBL008W-AQ3E821 79 aa3.33□□□□□ -1.88
CKS1YBR135W DSF1P0CX08 502 aa3.32□□□□□ -1.88
CKS1YBR135W YNR073CP0CX09 502 aa3.32□□□□□ -1.88
CKS1YBR135W DPM1P14020 267 aaKnown RBP3.32□□□□□ -1.88
CKS1YBR135W SCL1P21243 252 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms