RNA–Protein interactions for RNA: YBR005W

RCR1, Transcript of Protein of the ER membrane involved in cell wall chitin deposition, yeast

Gene RCR1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCR1	YBR005W	YGR042W	P53227	271 aa		6.31	□□□□□ -1.4
RCR1	YBR005W	CRH1	P53301	507 aa		6.31	□□□□□ -1.4
RCR1	YBR005W	YDR274C	P87283	123 aa		6.31	□□□□□ -1.4
RCR1	YBR005W	YDR415C	Q04033	374 aa	Predicted RBP	6.31	□□□□□ -1.4
RCR1	YBR005W	SCW10	Q04951	389 aa		6.31	□□□□□ -1.4
RCR1	YBR005W	AEP3	Q12089	606 aa		6.31	□□□□□ -1.4
RCR1	YBR005W	ATG31	Q12421	196 aa		6.31	□□□□□ -1.4
RCR1	YBR005W	LAG1	P38703	411 aa		6.3	□□□□□ -1.4
RCR1	YBR005W	WWM1	P43582	211 aa	Known RBP	6.3	□□□□□ -1.4
RCR1	YBR005W	SSU72	P53538	206 aa	Predicted RBP	6.3	□□□□□ -1.4
RCR1	YBR005W	TMA20	P89886	181 aa	Predicted RBP	6.3	□□□□□ -1.4
RCR1	YBR005W	YML122C	Q03207	126 aa		6.3	□□□□□ -1.4
RCR1	YBR005W	YML018C	Q03730	393 aa		6.3	□□□□□ -1.4
RCR1	YBR005W	ATG41	Q12048	136 aa		6.3	□□□□□ -1.4
RCR1	YBR005W	BOL1	Q3E793	110 aa		6.3	□□□□□ -1.4
RCR1	YBR005W	MDN1	Q12019	4910 aa	Known RBP	6.3	□□□□□ -1.4
RCR1	YBR005W	TRP4	P07285	380 aa	Predicted RBP	6.29	□□□□□ -1.4
RCR1	YBR005W	HOM6	P31116	359 aa	Known RBP	6.29	□□□□□ -1.4
RCR1	YBR005W	ECM33	P38248	429 aa	Known RBP	6.29	□□□□□ -1.4
RCR1	YBR005W	POP2	P39008	433 aa		6.29	□□□□□ -1.4
RCR1	YBR005W	IMD3	P50095	523 aa	Known RBP	6.29	□□□□□ -1.4
RCR1	YBR005W	UBP8	P50102	471 aa		6.29	□□□□□ -1.4
RCR1	YBR005W	CPD1	P53314	239 aa		6.29	□□□□□ -1.4
RCR1	YBR005W	RRG8	Q06109	277 aa		6.29	□□□□□ -1.4
RCR1	YBR005W	PBP4	Q07362	185 aa	Known RBP	6.29	□□□□□ -1.4
RCR1	YBR005W	INP53	Q12271	1107 aa		6.29	□□□□□ -1.4
RCR1	YBR005W	YJR112W-A	Q3E743	109 aa		6.29	□□□□□ -1.4
RCR1	YBR005W	SUS1	Q6WNK7	96 aa		6.29	□□□□□ -1.4
RCR1	YBR005W	RPL24B	P24000	155 aa	Known RBP	6.28	□□□□□ -1.4
RCR1	YBR005W	AUA1	P32450	94 aa		6.28	□□□□□ -1.4
RCR1	YBR005W	ALK2	P32789	676 aa	Predicted RBP	6.28	□□□□□ -1.4
RCR1	YBR005W	PDC2	P32896	925 aa		6.28	□□□□□ -1.4
RCR1	YBR005W	MIC12	P38341	106 aa		6.28	□□□□□ -1.4
RCR1	YBR005W	OTU1	P43558	301 aa		6.28	□□□□□ -1.4
RCR1	YBR005W	YGR219W	P53307	113 aa		6.28	□□□□□ -1.4
RCR1	YBR005W	YLR031W	Q07978	186 aa		6.28	□□□□□ -1.4
RCR1	YBR005W	RAD28	Q12021	506 aa		6.28	□□□□□ -1.4
RCR1	YBR005W	NOP1	P15646	327 aa	Known RBP	6.27	□□□□□ -1.41
RCR1	YBR005W	SEN2	P16658	377 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	DIT1	P21623	536 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	YKR045C	P36138	183 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	IES5	P40060	125 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	SYG1	P40528	902 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	GVP36	P40531	326 aa	Known RBP	6.27	□□□□□ -1.41
RCR1	YBR005W	YPI1	P43587	155 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	ERV29	P53337	310 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	ERV25	P54837	211 aa	Known RBP	6.27	□□□□□ -1.41
RCR1	YBR005W	SPO19	Q03029	223 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	TRI1	Q05024	226 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	HUG1	Q6Q5K6	68 aa		6.27	□□□□□ -1.41
RCR1	YBR005W	TRR1	P29509	319 aa	Known RBP	6.26	□□□□□ -1.41
RCR1	YBR005W	LSM12	P38828	187 aa	Known RBP	6.26	□□□□□ -1.41
RCR1	YBR005W	MSE1	P48525	536 aa		6.26	□□□□□ -1.41
RCR1	YBR005W	NCE103	P53615	221 aa		6.26	□□□□□ -1.41
RCR1	YBR005W	PEX10	Q05568	337 aa		6.26	□□□□□ -1.41
RCR1	YBR005W	KEI1	Q06346	221 aa		6.26	□□□□□ -1.41
RCR1	YBR005W	MRPL35	Q06678	367 aa		6.26	□□□□□ -1.41
RCR1	YBR005W	CDC23	P16522	626 aa		6.25	□□□□□ -1.41
RCR1	YBR005W	ATP3	P38077	311 aa	Known RBP	6.25	□□□□□ -1.41
RCR1	YBR005W	RTC3	P38804	111 aa	Predicted RBP	6.25	□□□□□ -1.41
RCR1	YBR005W	AGX1	P43567	385 aa		6.25	□□□□□ -1.41
RCR1	YBR005W	YFR035C	P43608	114 aa		6.25	□□□□□ -1.41
RCR1	YBR005W	LSM1	P47017	172 aa	Known RBP	6.25	□□□□□ -1.41
RCR1	YBR005W	PAM18	Q07914	168 aa		6.25	□□□□□ -1.41
RCR1	YBR005W	SCP1	Q08873	200 aa		6.25	□□□□□ -1.41
RCR1	YBR005W	PET20	Q99373	253 aa		6.25	□□□□□ -1.41
RCR1	YBR005W	MIR1	P23641	311 aa	Known RBP	6.24	□□□□□ -1.41
RCR1	YBR005W	AGA2	P32781	87 aa		6.24	□□□□□ -1.41
RCR1	YBR005W	YBR184W	P38299	523 aa		6.24	□□□□□ -1.41
RCR1	YBR005W	YPT31	P38555	223 aa	Known RBP	6.24	□□□□□ -1.41
RCR1	YBR005W	HTD2	P38790	280 aa	Known RBP	6.24	□□□□□ -1.41
RCR1	YBR005W	LST8	P41318	303 aa		6.24	□□□□□ -1.41
RCR1	YBR005W	ALG13	P53178	202 aa		6.24	□□□□□ -1.41
RCR1	YBR005W	YOR283W	Q12040	230 aa	Known RBP	6.24	□□□□□ -1.41
RCR1	YBR005W	DCP1	Q12517	231 aa	Predicted RBP	6.24	□□□□□ -1.41
RCR1	YBR005W	RPL3	P14126	387 aa	Known RBP	6.23	□□□□□ -1.41
RCR1	YBR005W	RNP1	P32385	249 aa		6.23	□□□□□ -1.41
RCR1	YBR005W	MRPL27	P36526	146 aa	Predicted RBP	6.23	□□□□□ -1.41
RCR1	YBR005W	DOG2	P38773	246 aa		6.23	□□□□□ -1.41
RCR1	YBR005W	DOG1	P38774	246 aa		6.23	□□□□□ -1.41
RCR1	YBR005W	MGR3	Q04472	501 aa		6.23	□□□□□ -1.41
RCR1	YBR005W	RTT103	Q05543	409 aa		6.23	□□□□□ -1.41
RCR1	YBR005W	YPS1	P32329	569 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	FMT1	P32785	401 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	QDR3	P38227	689 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	MBA1	P38300	278 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	JLP2	P40206	208 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	AIM20	P40451	204 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	IRC24	P40580	263 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	CAT5	P41735	233 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	YGR210C	P42942	411 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	ARO8	P53090	500 aa	Known RBP	6.22	□□□□□ -1.41
RCR1	YBR005W	YMR181C	Q03231	154 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	FSH2	Q05015	223 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	MSH5	Q12175	901 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	YGL258W-A	Q3E740	77 aa		6.22	□□□□□ -1.41
RCR1	YBR005W	PET494	P07390	489 aa	Predicted RBP	6.21	□□□□□ -1.42
RCR1	YBR005W	MRS4	P23500	304 aa		6.21	□□□□□ -1.42
RCR1	YBR005W	CPR4	P25334	318 aa		6.21	□□□□□ -1.42
RCR1	YBR005W	GPX2	P38143	162 aa		6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 111.3 ms