RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	ANKS6	Q68DC2	871 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	PPP4R3A	Q6IN85	833 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	KSR2	Q6VAB6	950 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	GPRIN1	Q7Z2K8	1008 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	TTC7B	Q86TV6	843 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	UBR1	Q8IWV7	1749 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	DCBLD1	Q8N8Z6	715 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	SLC35B2	Q8TB61	432 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	STON2	Q8WXE9	905 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	EDA	Q92838	391 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	CHFR	Q96EP1	664 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	C1GALT1C1	Q96EU7	318 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	MAP3K14	Q99558	947 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	RNF17	Q9BXT8	1623 aa	Known RBP	7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	SENP6	Q9GZR1	1112 aa	Predicted RBP	7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	TMEM140	Q9NV12	185 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	SHANK2	Q9UPX8	1470 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	ACTL7A	Q9Y615	435 aa		7.14	□□□□□ -1.27
NRXN1-223	ENST00000625891	IQGAP1	P46940	1657 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	ARHGEF5	Q12774	1597 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	RTEL1-TNFRSF6B	F6WH68	1400 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	WDR33	Q9C0J8	1336 aa	Known RBP	7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	VSTM5	A8MXK1	200 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	CXorf49	A8MYA2	514 aa	Predicted RBP	7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	ALDH2	P05091	517 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	ALDH1A3	P47895	512 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	TLE1	Q04724	770 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	SMN1	Q16637	294 aa	Known RBP	7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	USP39	Q53GS9	565 aa	Known RBP	7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	SPTY2D1	Q68D10	685 aa	Predicted RBP	7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	OTUD7B	Q6GQQ9	843 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	MFSD5	Q6N075	450 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	MAMDC4	Q6UXC1	1216 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	DRC7	Q8IY82	874 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	GRAMD1C	Q8IYS0	662 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	ARL8A	Q96BM9	186 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	CLPTM1L	Q96KA5	538 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	ACO2	Q99798	780 aa	Known RBP	7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	CALCOCO1	Q9P1Z2	691 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	SLC23A1	Q9UHI7	598 aa		7.13	□□□□□ -1.27
NRXN1-223	ENST00000625891	UGGT1	Q9NYU2	1555 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	LRRC7	Q96NW7	1537 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	LRRC9	Q6ZRR7	1453 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	MIA2	Q96PC5	1412 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	PNPLA7	Q6ZV29	1317 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891		H3BML4	177 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	PLSCR1	O15162	318 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	SLC16A6	O15403	523 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	ZNF202	O95125	648 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	TRIM27	P14373	513 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	MAP2K6	P52564	334 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	CTXN1	P60606	82 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	RAB39A	Q14964	217 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	XYLT1	Q86Y38	959 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	PLXDC1	Q8IUK5	500 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	MDGA1	Q8NFP4	955 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	SVIP	Q8NHG7	77 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	EXTL1	Q92935	676 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	TTC17	Q96AE7	1141 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	TMX3	Q96JJ7	454 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	CPEB1	Q9BZB8	566 aa	Known RBP	7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	MOCS1	Q9NZB8	636 aa		7.12	□□□□□ -1.27
NRXN1-223	ENST00000625891	ERVK-7	P63135	1459 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	NPHP4	O75161	1426 aa	Predicted RBP	7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	LRRC14B	A6NHZ5	514 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891		B5MCH6	92 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	PJA2	O43164	708 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	NARS	O43776	548 aa	Known RBP	7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	COMT	P21964	271 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	INHBE	P58166	350 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	ZNF280A	P59817	542 aa	Predicted RBP	7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	GBX1	Q14549	363 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	ELAVL1	Q15717	326 aa	Known RBP	7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	BMT2	Q1RMZ1	405 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	C1QL3	Q5VWW1	255 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	ELOA2	Q8IYF1	753 aa	Predicted RBP	7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	D2HGDH	Q8N465	521 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	AMER2	Q8N7J2	671 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	OR52N2	Q8NGI0	321 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	RGMA	Q96B86	450 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	LRFN3	Q9BTN0	628 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	RGS17	Q9UGC6	210 aa	Predicted RBP	7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	PIK3C2B	O00750	1634 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	MAST1	Q9Y2H9	1570 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	MYO5B	Q9ULV0	1848 aa		7.11	□□□□□ -1.27
NRXN1-223	ENST00000625891	CROCC2	H7BZ55	1655 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	DEPDC5	O75140	1603 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	TBKBP1	A7MCY6	615 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	TEX33	O43247	280 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	RPLP2	P05387	115 aa	Known RBP	7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	NBPF7	P0C2Y1	421 aa	Predicted RBP	7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	PHKG2	P15735	406 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	HK3	P52790	923 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	RABGGTB	P53611	331 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	DPT	Q07507	201 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	NOG	Q13253	232 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	KHDC1	Q4VXA5	237 aa	Known RBP	7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	METTL24	Q5JXM2	366 aa		7.1	□□□□□ -1.27
NRXN1-223	ENST00000625891	DACT2	Q5SW24	774 aa		7.1	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms