RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 BAG1Q99933 345 aaPredicted RBP19.93■□□□□ 0.78
SSBP4-212ENST00000601919 CYP3A43Q9HB55 503 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 NXF1Q9UBU9 619 aaKnown RBP19.93■□□□□ 0.78
SSBP4-212ENST00000601919 BZW2Q9Y6E2 419 aaKnown RBP19.93■□□□□ 0.78
SSBP4-212ENST00000601919 SCN1AP35498 2009 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 RBAK-RBAKDNI3L0D1 243 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 PODXLO00592 558 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 CDK17Q00537 523 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 CYP26C1Q6V0L0 522 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.92■□□□□ 0.78
SSBP4-212ENST00000601919 TMTC1Q8IUR5 882 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 TOP1MTQ969P6 601 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 KREMEN1Q96MU8 473 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 MTIF3Q9H2K0 278 aaKnown RBP19.92■□□□□ 0.78
SSBP4-212ENST00000601919 GOLGA2P5Q9HBQ8 144 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 TBC1D13Q9NVG8 400 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 AJAP1Q9UKB5 411 aaPredicted RBP19.92■□□□□ 0.78
SSBP4-212ENST00000601919 NR2E3Q9Y5X4 410 aa19.92■□□□□ 0.78
SSBP4-212ENST00000601919 FNDC1Q4ZHG4 1894 aaPredicted RBP19.92■□□□□ 0.78
SSBP4-212ENST00000601919 SERPING1P05155 500 aa19.91■□□□□ 0.78
SSBP4-212ENST00000601919 USP8P40818 1118 aa19.91■□□□□ 0.78
SSBP4-212ENST00000601919 WDR5P61964 334 aaKnown RBP19.91■□□□□ 0.78
SSBP4-212ENST00000601919 MEA1Q16626 185 aa19.91■□□□□ 0.78
SSBP4-212ENST00000601919 UPP1Q16831 310 aa19.91■□□□□ 0.78
SSBP4-212ENST00000601919 LRRC43Q8N309 656 aa19.91■□□□□ 0.78
SSBP4-212ENST00000601919 CASD1Q96PB1 797 aa19.91■□□□□ 0.78
SSBP4-212ENST00000601919 BCO2Q9BYV7 579 aa19.91■□□□□ 0.78
SSBP4-212ENST00000601919 DNAI2Q9GZS0 605 aa19.91■□□□□ 0.78
SSBP4-212ENST00000601919 GDAP2Q9NXN4 497 aa19.91■□□□□ 0.78
SSBP4-212ENST00000601919 ARHGEF37A1IGU5 675 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 CASTOR2A6NHX0 329 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 TBKBP1A7MCY6 615 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 KPNA7A9QM74 516 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 FOXN3O00409 490 aaPredicted RBP19.9■□□□□ 0.78
SSBP4-212ENST00000601919 UPP2O95045 317 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 FECHP22830 423 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 ASPAP45381 313 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 CLCNKBP51801 687 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 BPIFB4P59827 614 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 LILRA4P59901 499 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 DSC1Q08554 894 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 DCLRE1AQ6PJP8 1040 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 ZNF365Q70YC5 407 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 OTOP2Q7RTS6 562 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 FAM71AQ8IYT1 594 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 KAT5Q92993 513 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 MMS19Q96T76 1030 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 PCDHB4Q9Y5E5 795 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 SNX9Q9Y5X1 595 aa19.9■□□□□ 0.78
SSBP4-212ENST00000601919 CARNS1A5YM72 827 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 ZBBXA8MT70 800 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 PPEF2O14830 753 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 DGKIO75912 1065 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 GFPT2O94808 682 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 SKILP12757 684 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 KRT5P13647 590 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 SYN1P17600 705 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 ARID5AQ03989 594 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 KLHL30Q0D2K2 578 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 SCARA3Q6AZY7 606 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 SCARA5Q6ZMJ2 495 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 VPS36Q86VN1 386 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 COLGALT2Q8IYK4 626 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 ELMO3Q96BJ8 720 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 GPR88Q9GZN0 384 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 ZMYND8Q9ULU4 1186 aaPredicted RBP19.89■□□□□ 0.77
SSBP4-212ENST00000601919 POLIQ9UNA4 740 aa19.89■□□□□ 0.77
SSBP4-212ENST00000601919 ARHGAP6O43182 974 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 HUS1O60921 280 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 B3GAT3O94766 335 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 FAM163BP0C2L3 166 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 PRKCIP41743 596 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 TMEM240Q5SV17 173 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 C16orf59Q7L2K0 433 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 DPH6Q7L8W6 267 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 TMEM130Q8N3G9 435 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 TOP6BLQ8N6T0 577 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 ARID3AQ99856 593 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 TMEM175Q9BSA9 504 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 CISHQ9NSE2 258 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 CNTN6Q9UQ52 1028 aa19.88■□□□□ 0.77
SSBP4-212ENST00000601919 SSU72P8A0A1W2PR75 194 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 TMEM189-UBE2V1I3L0A0 370 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 DDHD2O94830 711 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 WEE2P0C1S8 567 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 ANXA13P27216 316 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 CCZ1BP86790 482 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 CCZ1P86791 482 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-212ENST00000601919 PTK2Q05397 1052 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 TDRD12Q587J7 1177 aaKnown RBP19.87■□□□□ 0.77
SSBP4-212ENST00000601919 WDR59Q6PJI9 974 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 TMEM270Q6UE05 265 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 DSTYKQ6XUX3 929 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 IRF2BP2Q7Z5L9 587 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 ZNF280BQ86YH2 543 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 CCDC170Q8IYT3 715 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 APPL2Q8NEU8 664 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 HERVK_113Q902F9 699 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 CCDC42Q96M95 316 aa19.87■□□□□ 0.77
SSBP4-212ENST00000601919 ZNF830Q96NB3 372 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms