RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 CYB561D2O14569 222 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 NRP1O14786 923 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 INPPL1O15357 1258 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 MEFVO15553 781 aaPredicted RBP9.59□□□□□ -0.87
BRCC3-206ENST00000399042 LPXNO60711 386 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 GALTP07902 379 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 MYOGP15173 224 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 CTNNB1P35222 781 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 PPM1AP35813 382 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 PBX3P40426 434 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 USP8P40818 1118 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 SLC11A1P49279 550 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 MRE11P49959 708 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 NOP14P78316 857 aaKnown RBP9.59□□□□□ -0.87
BRCC3-206ENST00000399042 SOX4Q06945 474 aaPredicted RBP9.59□□□□□ -0.87
BRCC3-206ENST00000399042 ELAVL2Q12926 359 aaKnown RBP9.59□□□□□ -0.87
BRCC3-206ENST00000399042 ZBTB6Q15916 424 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 UPP1Q16831 310 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 MIIPQ5JXC2 388 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 C1orf220Q5T0J3 134 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 PPP2R2DQ66LE6 453 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 KCNT2Q6UVM3 1135 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 SCARA5Q6ZMJ2 495 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 CACNA2D4Q7Z3S7 1137 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 PPFIBP1Q86W92 1011 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 CEP57Q86XR8 500 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 COLGALT2Q8IYK4 626 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 PPM1KQ8N3J5 372 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 LRRC52Q8N7C0 313 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 TAF4BQ92750 862 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 ZNF689Q96CS4 500 aaPredicted RBP9.59□□□□□ -0.87
BRCC3-206ENST00000399042 NAP1L5Q96NT1 182 aaPredicted RBP9.59□□□□□ -0.87
BRCC3-206ENST00000399042 HSD3B7Q9H2F3 369 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 SNX25Q9H3E2 840 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 SLC28A3Q9HAS3 691 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 FAM207AQ9NSI2 230 aaPredicted RBP9.59□□□□□ -0.87
BRCC3-206ENST00000399042 HCSTQ9UBK5 93 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 TET1Q8NFU7 2136 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 A0A1B0GTH6 734 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 GTPBP10A4D1E9 387 aaKnown RBP9.58□□□□□ -0.88
BRCC3-206ENST00000399042 KPNA7A9QM74 516 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 PIRO00625 290 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 TEX33O43247 280 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 CSPG5O95196 566 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
BRCC3-206ENST00000399042 CA3P07451 260 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 ODC1P11926 461 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 SLC9A1P19634 815 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 PAX3P23760 479 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 LRPAP1P30533 357 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 MFAP3P55082 362 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 LILRA4P59901 499 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 YWHAEP62258 255 aaKnown RBP9.58□□□□□ -0.88
BRCC3-206ENST00000399042 HTRA4P83105 476 aaPredicted RBP9.58□□□□□ -0.88
BRCC3-206ENST00000399042 DSC1Q08554 894 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 RAPGEF1Q13905 1077 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 NR1I3Q14994 352 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 ARHGAP44Q17R89 818 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 TSR1Q2NL82 804 aaKnown RBP9.58□□□□□ -0.88
BRCC3-206ENST00000399042 RASIP1Q5U651 963 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 FAM109BQ6ICB4 259 aaPredicted RBP9.58□□□□□ -0.88
BRCC3-206ENST00000399042 SPOPLQ6IQ16 392 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 RRAGAQ7L523 313 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 CRIPAKQ8N1N5 446 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 TMEM130Q8N3G9 435 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 COLGALT1Q8NBJ5 622 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 APPL2Q8NEU8 664 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 ZNF397Q8NF99 534 aaPredicted RBP9.58□□□□□ -0.88
BRCC3-206ENST00000399042 MICAL1Q8TDZ2 1067 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 CPLX3Q8WVH0 158 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 SEMA4DQ92854 862 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 ELMO3Q96BJ8 720 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 FAM81BQ96LP2 452 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 SPAG5Q96R06 1193 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 PAAF1Q9BRP4 392 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 NKX2-4Q9H2Z4 354 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 UBE2TQ9NPD8 197 aaPredicted RBP9.58□□□□□ -0.88
BRCC3-206ENST00000399042 SIX4Q9UIU6 781 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 ADAM28Q9UKQ2 775 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 SIP14410 1827 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 ALPK3Q96L96 1907 aa9.58□□□□□ -0.88
BRCC3-206ENST00000399042 SF3B1O75533 1304 aaKnown RBP eCLIP9.57□□□□□ -0.88
BRCC3-206ENST00000399042 ANO9A1A5B4 782 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 LCHNA4D1U4 455 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 I3L4J1 428 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 PPEF2O14830 753 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 PMM2O15305 246 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 KIF4AO95239 1232 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 VNN1O95497 513 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 ADCY5O95622 1261 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 KRT5P13647 590 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 CD58P19256 250 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 TBXAS1P24557 533 aaPredicted RBP9.57□□□□□ -0.88
BRCC3-206ENST00000399042 PON1P27169 355 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 PBX2P40425 430 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 BRCC3P46736 316 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 ZNF75DP51815 510 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 PTPN21Q16825 1174 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 EPC2Q52LR7 807 aa9.57□□□□□ -0.88
BRCC3-206ENST00000399042 FAM171A1Q5VUB5 890 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms