RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SMAD1Q15797 465 aaKnown RBP2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 LLGL2Q6P1M3 1020 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 WDR73Q6P4I2 378 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 ZNF449Q6P9G9 518 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 TMTC3Q6ZXV5 915 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 VASH1Q7L8A9 365 aaPredicted RBP2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 TLK2Q86UE8 772 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 MRPL43Q8N983 215 aaKnown RBP2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 SAP25Q8TEE9 199 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 LINC01599Q8WXQ3 324 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 SORBS1Q9BX66 1292 aaKnown RBP2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 XPNPEP3Q9NQH7 507 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 C1GALT1Q9NS00 363 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 MKS1Q9NXB0 559 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 KNSTRNQ9Y448 316 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 ASB3Q9Y575 518 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 SIPA1L1O43166 1804 aa2.18□□□□□ -2.06
SMARCAD1-202ENST00000359052 A0A1B0GTH6 734 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 A0A1W2PPH5 198 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 LACTBL1A8MY62 500 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 GOLGA6L6A8MZA4 724 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TUBBP07437 444 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 HSP90AB1P08238 724 aaKnown RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TFEBP19484 476 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 FDXRP22570 491 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CHKAP35790 457 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TLE1Q04724 770 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TRIM28Q13263 835 aaKnown RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SNAP47Q5SQN1 464 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SUSD1Q6UWL2 747 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 UNQ6494/PRO21346Q6UXR6 183 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 HEATR4Q86WZ0 1026 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 RPAP2Q8IXW5 612 aaPredicted RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TDRD5Q8NAT2 981 aaKnown RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CGRRF1Q99675 332 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CHORDC1Q9UHD1 332 aaPredicted RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 ZNF711Q9Y462 761 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TRAF6Q9Y4K3 522 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 DMDP11532 3685 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 A6NLC8 198 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SCAMP1O15126 338 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 STAT5AP42229 794 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 MC1RQ01726 317 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 BTKQ06187 659 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 PCDH1Q08174 1060 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 DMTNQ08495 405 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 NFIAQ12857 509 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 ITGA7Q13683 1181 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 KRBOX4Q5JUW0 171 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 NSMFQ6X4W1 530 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 ZBTB46Q86UZ6 589 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 WDR75Q8IWA0 830 aaKnown RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SCAMP5Q8TAC9 235 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SIGLEC11Q96RL6 698 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 NFS1Q9Y697 457 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 MSH6P52701 1360 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 UNC80Q8N2C7 3258 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CARMIL2Q6F5E8 1435 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 LGALS16A8MUM7 142 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SGTAO43765 313 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SIN3BO75182 1162 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 LARGE1O95461 756 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 NTSR2O95665 410 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 ELNP15502 786 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 ACO1P21399 889 aaKnown RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 UBASH3AP57075 661 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TUBB4BP68371 445 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TAF7Q15545 349 aaPredicted RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CCDC74BQ96LY2 380 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 UROC1Q96N76 676 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 ACAD9Q9H845 621 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TMEM184CQ9NVA4 438 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 MIS18AQ9NYP9 233 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CRNNQ9UBG3 495 aaPredicted RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 DNMT3LQ9UJW3 386 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 ADAMTS8Q9UP79 889 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 PIAS3Q9Y6X2 628 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 NPHP4O75161 1426 aaPredicted RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 A0A1W2PR48 441 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 FAM205CA6NFA0 338 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SGSM2O43147 1006 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 WIPF1O43516 503 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 MYCP01106 439 aaPredicted RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CLEC3BP05452 202 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CASP3P42574 277 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 MAP2K6P52564 334 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TMPRSS15P98073 1019 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 KIAA2012Q0VF49 1180 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 NNTQ13423 1086 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 PICALMQ13492 652 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 SPRYD7Q5W111 196 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 GK5Q6ZS86 529 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 RIN2Q8WYP3 895 aaPredicted RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 MR1Q95460 341 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 DUSP15Q9H1R2 295 aaPredicted RBP2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 DKK2Q9UBU2 259 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 TBK1Q9UHD2 729 aa2.17□□□□□ -2.06
SMARCAD1-202ENST00000359052 CD207Q9UJ71 328 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms