RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 SPATA16Q9BXB7 569 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 PCDHGA4Q9Y5G9 962 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 LRRC37AA6NMS7 1700 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 MAGEA13PA6NCF6 341 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 PGM3O95394 542 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 PARP6Q2NL67 630 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 EEPD1Q7L9B9 569 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 MYCT1Q8N699 235 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 ENDOVQ8N8Q3 282 aaKnown RBP17.17■□□□□ 0.34
CCDC8-201ENST00000307522 GMCL1P1Q8NEA9 526 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 SLC20A1Q8WUM9 679 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 HIC2Q96JB3 615 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 MAGEB18Q96M61 343 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 TAAR1Q96RJ0 339 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 PHF24Q9UPV7 400 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.17■□□□□ 0.34
CCDC8-201ENST00000307522 SPDYE16A6NNV3 312 aaPredicted RBP17.17■□□□□ 0.34
CCDC8-201ENST00000307522 CLDN3O15551 220 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 MAP3K7O43318 606 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 SUPT3HO75486 399 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 PIK3CAP42336 1068 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 RFWD2Q8NHY2 731 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 PTPRN2Q92932 1015 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 RPAP3Q9H6T3 665 aaPredicted RBP17.17■□□□□ 0.34
CCDC8-201ENST00000307522 SLC4A7Q9Y6M7 1214 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 AKAP3O75969 853 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 DDNO94850 711 aaPredicted RBP17.16■□□□□ 0.34
CCDC8-201ENST00000307522 IMPDH2P12268 514 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 KRT17Q04695 432 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 PABPC1LQ4VXU2 614 aaKnown RBP17.16■□□□□ 0.34
CCDC8-201ENST00000307522 TMEM63BQ5T3F8 832 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 NLRP9Q7RTR0 991 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 TAB3Q8N5C8 712 aaPredicted RBP17.16■□□□□ 0.34
CCDC8-201ENST00000307522 PPFIBP2Q8ND30 876 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 FBXO27Q8NI29 283 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 MPP4Q96JB8 637 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 GGA3Q9NZ52 723 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 ATXN10Q9UBB4 475 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 TDRKHQ9Y2W6 561 aaKnown RBP17.16■□□□□ 0.34
CCDC8-201ENST00000307522 GYG2O15488 501 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 SERPINB3P29508 390 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 RPA3P35244 121 aaPredicted RBP17.16■□□□□ 0.34
CCDC8-201ENST00000307522 ARHGEF18Q6ZSZ5 1173 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 SATL1Q86VE3 508 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 TRAPPC9Q96Q05 1148 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 PCIF1Q9H4Z3 704 aa17.16■□□□□ 0.34
CCDC8-201ENST00000307522 PVALEFA0A1B0GWK0 134 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 FAM187AA6NFU0 413 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 PSMG1O95456 288 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 ASNSP08243 561 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 XRCC5P13010 732 aaKnown RBP17.15■□□□□ 0.34
CCDC8-201ENST00000307522 ITGB5P18084 799 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 CYP2J2P51589 502 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 SPIRE1Q08AE8 756 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 STRN3Q13033 797 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 TMEM119Q4V9L6 283 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 GATA6Q92908 595 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 SMC6Q96SB8 1091 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 GPRC5CQ9NQ84 441 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 RNASEH1O60930 286 aaKnown RBP17.15■□□□□ 0.34
CCDC8-201ENST00000307522 KRT15P19012 456 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 COMTP21964 271 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 PPP1R2P41236 205 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 IL9RQ01113 521 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 DHX34Q14147 1143 aaKnown RBP17.15■□□□□ 0.34
CCDC8-201ENST00000307522 SH3TC2Q8TF17 1288 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 CHURC1Q8WUH1 139 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 RFFLQ8WZ73 363 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 FAM161BQ96MY7 647 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 KIFC3Q9BVG8 833 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 ZNF189O75820 626 aaPredicted RBP17.15■□□□□ 0.34
CCDC8-201ENST00000307522 HNRNPCP07910 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC8-201ENST00000307522 ITGA8P53708 1063 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 MKRN3Q13064 507 aaKnown RBP17.15■□□□□ 0.34
CCDC8-201ENST00000307522 TNFAIP8L3Q5GJ75 292 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 RINLQ6ZS11 566 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 HIPK4Q8NE63 616 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 MRIQ9BWK5 157 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 UNC45AQ9H3U1 944 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 RABGAP1Q9Y3P9 1069 aa17.15■□□□□ 0.34
CCDC8-201ENST00000307522 TXNDC9O14530 226 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 TRIM49P0CI25 452 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 TRIM49CP0CI26 452 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 CA4P22748 312 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 SREBF1P36956 1147 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 ZBTB16Q05516 673 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 BTKQ06187 659 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 SLC34A1Q06495 639 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 SLC1A5Q15758 541 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 DDX27Q96GQ7 796 aaKnown RBP17.14■□□□□ 0.33
CCDC8-201ENST00000307522 HEMGNQ9BXL5 484 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 CHST7Q9NS84 486 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 STK17AQ9UEE5 414 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 PCDHA3Q9Y5H8 950 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 hCG_1984214I3L0E3 225 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 OATP04181 439 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 ABCD1P33897 745 aa17.14■□□□□ 0.33
CCDC8-201ENST00000307522 COILP38432 576 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms