RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 EIF2AQ9BY44 585 aaKnown RBP24.24■■□□□ 1.47
CDX1-201ENST00000231656 OSBPL7Q9BZF2 842 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 RNF14Q9UBS8 474 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 KYAT1Q16773 422 aa24.23■■□□□ 1.47
CDX1-201ENST00000231656 SPATA4Q8NEY3 305 aa24.23■■□□□ 1.47
CDX1-201ENST00000231656 HNRNPLLQ8WVV9 542 aaKnown RBP24.23■■□□□ 1.47
CDX1-201ENST00000231656 GOLPH3Q9H4A6 298 aa24.23■■□□□ 1.47
CDX1-201ENST00000231656 AGO3Q9H9G7 860 aaKnown RBP24.23■■□□□ 1.47
CDX1-201ENST00000231656 RPF1Q9H9Y2 349 aaKnown RBP24.23■■□□□ 1.47
CDX1-201ENST00000231656 C1orf112Q9NSG2 853 aa24.23■■□□□ 1.47
CDX1-201ENST00000231656 SMARCAL1Q9NZC9 954 aa24.23■■□□□ 1.47
CDX1-201ENST00000231656 EHD2Q9NZN4 543 aa24.23■■□□□ 1.47
CDX1-201ENST00000231656 STXBP5LQ9Y2K9 1186 aa24.23■■□□□ 1.47
CDX1-201ENST00000231656 KIF4AO95239 1232 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 CD4P01730 458 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 CXCL8P10145 99 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 CYP11B1P15538 503 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 ABCB4P21439 1286 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 PIK3CAP42336 1068 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 VSNL1P62760 191 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 NFX1Q12986 1120 aaKnown RBP24.22■■□□□ 1.47
CDX1-201ENST00000231656 RPS6KA1Q15418 735 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 CCDC181Q5TID7 509 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 WDR93Q6P2C0 686 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 SLC35G2Q8TBE7 412 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 FAM212AQ96EL1 285 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 THAP2Q9H0W7 228 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 ARFGAP3Q9NP61 516 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 ACP6Q9NPH0 428 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 OGFRQ9NZT2 677 aa24.22■■□□□ 1.47
CDX1-201ENST00000231656 TARSL2A2RTX5 802 aaKnown RBP24.21■■□□□ 1.47
CDX1-201ENST00000231656 CES2O00748 559 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 GHRP10912 638 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 GRM5P41594 1212 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 PAFAH1B1P43034 410 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 ATN1P54259 1190 aaPredicted RBP24.21■■□□□ 1.47
CDX1-201ENST00000231656 FMO1Q01740 532 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 POU5F1Q01860 360 aaKnown RBP24.21■■□□□ 1.47
CDX1-201ENST00000231656 SLC39A5Q6ZMH5 540 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 MS4A14Q96JA4 679 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 OSGEPQ9NPF4 335 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 TRIP11Q15643 1979 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 GPR182O15218 404 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 MEFVO15553 781 aaPredicted RBP24.21■■□□□ 1.47
CDX1-201ENST00000231656 RTN2O75298 545 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 COL6A1P12109 1028 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 GZMAP12544 262 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 BIRC3Q13489 604 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 LPIN1Q14693 890 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 TCEAL1Q15170 157 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 SURF1Q15526 300 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 CFAP221Q4G0U5 840 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 UBXN11Q5T124 520 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 TAF3Q5VWG9 929 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 TRAF7Q6Q0C0 670 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 SYCE1Q8N0S2 351 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 OR5B17Q8NGF7 314 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 DIS3LQ8TF46 1054 aaKnown RBP24.21■■□□□ 1.47
CDX1-201ENST00000231656 DDX1Q92499 740 aaKnown RBP24.21■■□□□ 1.47
CDX1-201ENST00000231656 ACAP3Q96P50 834 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 TRIM6Q9C030 488 aaPredicted RBP24.21■■□□□ 1.47
CDX1-201ENST00000231656 MROH7Q68CQ1 1323 aa24.21■■□□□ 1.47
CDX1-201ENST00000231656 SPDYE4A6NLX3 237 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 ATP8B1O43520 1251 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 FTLP02792 175 aaPredicted RBP24.2■■□□□ 1.46
CDX1-201ENST00000231656 MMEP08473 750 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 DNA2P51530 1060 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 CDR2Q01850 454 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 WDR44Q5JSH3 913 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 WDR49Q8IV35 697 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 ANKLE1Q8NAG6 615 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 ABCB6Q9NP58 842 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 RNF216Q9NWF9 866 aaPredicted RBP24.2■■□□□ 1.46
CDX1-201ENST00000231656 PADI3Q9ULW8 664 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 SQORQ9Y6N5 450 aa24.2■■□□□ 1.46
CDX1-201ENST00000231656 PQBP1O60828 265 aaKnown RBP24.19■■□□□ 1.46
CDX1-201ENST00000231656 IL18RAPO95256 599 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 CD52P31358 61 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 PDE6CP51160 858 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 HADHBP55084 474 aaKnown RBP24.19■■□□□ 1.46
CDX1-201ENST00000231656 SLC10A6Q3KNW5 377 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 TWF2Q6IBS0 349 aaKnown RBP24.19■■□□□ 1.46
CDX1-201ENST00000231656 NT5DC3Q86UY8 548 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 ERVK-5Q9HDB9 667 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 BUB1BO60566 1050 aaPredicted RBP24.19■■□□□ 1.46
CDX1-201ENST00000231656 PAK2Q13177 524 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 PEX26Q7Z412 305 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 USP38Q8NB14 1042 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 TAF4BQ92750 862 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 NXF3Q9H4D5 531 aaKnown RBP24.19■■□□□ 1.46
CDX1-201ENST00000231656 APOBEC3GQ9HC16 384 aaKnown RBP24.19■■□□□ 1.46
CDX1-201ENST00000231656 CHST12Q9NRB3 414 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 SNTG2Q9NY99 539 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 COG5Q9UP83 839 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 HES2Q9Y543 173 aa24.19■■□□□ 1.46
CDX1-201ENST00000231656 LACTBL1A8MY62 500 aa24.18■■□□□ 1.46
CDX1-201ENST00000231656 KRT5P13647 590 aa24.18■■□□□ 1.46
CDX1-201ENST00000231656 AP3M2P53677 418 aa24.18■■□□□ 1.46
CDX1-201ENST00000231656 MBTPS1Q14703 1052 aa24.18■■□□□ 1.46
CDX1-201ENST00000231656 LONRF2Q1L5Z9 754 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms