RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Wnt10bP48614 389 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Polr1bP70700 1135 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Nr1d2Q60674 576 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 MuskQ61006 868 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Bcap29Q61334 240 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Tmem179Q8BHH9 233 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Tmem154Q8C4Q9 181 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Rtp1Q8C8C1 263 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Gpc3Q8CFZ4 579 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Wasf1Q8R5H6 559 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Krt79Q8VED5 531 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Eps8l2Q99K30 729 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Krt84Q99M73 603 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Fam227aQ9D3V8 625 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Gstt4Q9D4P7 240 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Nup188Q6ZQH8 1759 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Ltn1Q6A009 1767 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Gm14525B1AZA0 212 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Zfp174B9EJW5 407 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Gm2030D3Z7C4 212 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Clk3O35492 638 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Aff2O55112 1272 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Lrrc4bP0C192 709 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 BrafP28028 804 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 VdrP48281 422 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 4930430A15RikQ05AC5 485 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Armc7Q3UJZ3 198 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Kcnh1Q60603 989 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Nab2Q61127 525 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Psen2Q61144 448 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Teddm1aQ810U2 305 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Csrnp2Q8BGQ2 534 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Exoc3l1Q8BI71 739 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Apol10aQ8CCA5 318 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Mmgt1Q8K273 131 aaKnown RBP7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Gadd45gip1Q9CR59 222 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Ppil2Q9D787 521 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Kat2aQ9JHD2 830 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 PodxlQ9R0M4 503 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Mapk13Q9Z1B7 366 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Mmrn1B2RPV6 1210 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Gm4297D3YWB7 211 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Pdlim1O70400 327 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 UmpsP13439 481 aaKnown RBP7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Ifrd1P19182 449 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Rab21P35282 222 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Atp6v1e1P50518 226 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Nell2Q61220 819 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Q8BL95 290 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Usp44Q8C2S0 711 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Arhgap29Q8CGF1 1266 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Vmn1r218Q8R261 298 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 AagabQ8R2R3 316 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Rnf167Q91XF4 347 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Q922C1 641 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Ggt7Q99JP7 662 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Q9D4A5 307 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Pard6bQ9JK83 371 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Ca5bQ9QZA0 317 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Col3a1P08121 1464 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 Pitpnm2Q6ZPQ6 1335 aa7.54□□□□□ -1.2
Chm-202ENSMUST00000113388 2210016F16RikG3X8U3 338 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Rtn2O70622 471 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 SsbP32067 415 aaKnown RBP7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 NfiaQ02780 532 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Trpc5osQ3UHV4 110 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Lpcat4Q6NVG1 524 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Dlgap3Q6PFD5 977 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 LdhdQ7TNG8 484 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Fam161bQ8CB59 589 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Vps4aQ8VEJ9 437 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Calml4Q91WQ9 153 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Tc2nQ91XT6 489 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Bbs2Q9CWF6 721 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 KelQ9EQF2 713 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Slfn14V9GXG1 899 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 NinQ61043 2035 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 1700003F12RikA2AKE5 210 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Slc4a9E9PUP3 929 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 FancfE9Q5Z5 343 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Gm3696K7N751 203 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Olfm1O88998 485 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 PlaaP27612 794 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Oprl1P35377 367 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Gm45902Q3UDN3 361 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 N4bp1Q6A037 893 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Znf423Q80TS5 1292 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Samd14Q8K070 417 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Krtcap3Q8K177 240 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Tbrg4Q91YM4 630 aaKnown RBP7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Gpatch1Q9DBM1 930 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Vps35Q9EQH3 796 aaKnown RBP7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Abcb9Q9JJ59 762 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Slc39a1Q9QZ03 324 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 NfkbiaQ9Z1E3 314 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Scn9aQ62205 1984 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Gm5580A0A0N4SVP8 411 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Veph1A1A535 833 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Acnat1A2AKK5 416 aa7.53□□□□□ -1.2
Chm-202ENSMUST00000113388 Gm5849J3QPE5 117 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms