RNA–Protein interactions for RNA: tA(UGC)G

tA(UGC)G, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(UGC)G, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(UGC)GtA(UGC)G SUI2P20459 304 aaKnown RBP10.29□□□□□ -0.76
tA(UGC)GtA(UGC)G SYF1Q04048 859 aaPredicted RBP10.29□□□□□ -0.76
tA(UGC)GtA(UGC)G RPS9BP05755 195 aaKnown RBP10.28□□□□□ -0.76
tA(UGC)GtA(UGC)G ICL1P28240 557 aaPredicted RBP10.28□□□□□ -0.76
tA(UGC)GtA(UGC)G SET1P38827 1080 aaKnown RBP10.28□□□□□ -0.76
tA(UGC)GtA(UGC)G SHC1P39000 512 aa10.28□□□□□ -0.76
tA(UGC)GtA(UGC)G CST6P40535 587 aa10.28□□□□□ -0.76
tA(UGC)GtA(UGC)G FCP1Q03254 732 aa10.27□□□□□ -0.77
tA(UGC)GtA(UGC)G SAC3P46674 1301 aa10.27□□□□□ -0.77
tA(UGC)GtA(UGC)G ATG20Q07528 640 aa10.26□□□□□ -0.77
tA(UGC)GtA(UGC)G DIP2Q12220 943 aaPredicted RBP10.26□□□□□ -0.77
tA(UGC)GtA(UGC)G GRX6Q12438 231 aa10.26□□□□□ -0.77
tA(UGC)GtA(UGC)G YLR278CQ05854 1341 aa10.26□□□□□ -0.77
tA(UGC)GtA(UGC)G SSA4P22202 642 aaKnown RBP10.25□□□□□ -0.77
tA(UGC)GtA(UGC)G PUS5Q06244 254 aa10.25□□□□□ -0.77
tA(UGC)GtA(UGC)G MRP7P12687 371 aa10.24□□□□□ -0.77
tA(UGC)GtA(UGC)G FRD1P32614 470 aaKnown RBP10.24□□□□□ -0.77
tA(UGC)GtA(UGC)G YKU70P32807 602 aa10.24□□□□□ -0.77
tA(UGC)GtA(UGC)G DUR1,2P32528 1835 aaKnown RBP10.23□□□□□ -0.77
tA(UGC)GtA(UGC)G TOP1P04786 769 aa10.23□□□□□ -0.77
tA(UGC)GtA(UGC)G NUP133P36161 1157 aa10.23□□□□□ -0.77
tA(UGC)GtA(UGC)G RPN1P38764 993 aaKnown RBP10.23□□□□□ -0.77
tA(UGC)GtA(UGC)G VPS27P40343 622 aaKnown RBP10.23□□□□□ -0.77
tA(UGC)GtA(UGC)G RET1P22276 1149 aaKnown RBP10.22□□□□□ -0.77
tA(UGC)GtA(UGC)G SET4P42948 560 aa10.22□□□□□ -0.77
tA(UGC)GtA(UGC)G SAS4Q04003 481 aa10.22□□□□□ -0.77
tA(UGC)GtA(UGC)G YGR122WP53272 402 aa10.21□□□□□ -0.77
tA(UGC)GtA(UGC)G PKH1Q03407 766 aa10.21□□□□□ -0.77
tA(UGC)GtA(UGC)G PEX21P50091 288 aa10.2□□□□□ -0.78
tA(UGC)GtA(UGC)G SLI15P38283 698 aa10.19□□□□□ -0.78
tA(UGC)GtA(UGC)G ITC1P53125 1264 aa10.19□□□□□ -0.78
tA(UGC)GtA(UGC)G RAD24P32641 659 aa10.18□□□□□ -0.78
tA(UGC)GtA(UGC)G ICP55P40051 511 aa10.18□□□□□ -0.78
tA(UGC)GtA(UGC)G MTC5Q03897 1148 aa10.18□□□□□ -0.78
tA(UGC)GtA(UGC)G DPL1Q05567 589 aa10.18□□□□□ -0.78
tA(UGC)GtA(UGC)G DPH6Q12429 685 aa10.18□□□□□ -0.78
tA(UGC)GtA(UGC)G THS1P04801 734 aaKnown RBP10.17□□□□□ -0.78
tA(UGC)GtA(UGC)G NSR1P27476 414 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
tA(UGC)GtA(UGC)G KRE2P27809 442 aa10.17□□□□□ -0.78
tA(UGC)GtA(UGC)G RTG2P32608 588 aaKnown RBP10.17□□□□□ -0.78
tA(UGC)GtA(UGC)G SPL2P38839 148 aa10.17□□□□□ -0.78
tA(UGC)GtA(UGC)G CDC45Q08032 650 aa10.17□□□□□ -0.78
tA(UGC)GtA(UGC)G TRP5P00931 707 aaKnown RBP10.16□□□□□ -0.78
tA(UGC)GtA(UGC)G YPP1P46951 817 aa10.16□□□□□ -0.78
tA(UGC)GtA(UGC)G SWC3P31376 625 aa10.15□□□□□ -0.78
tA(UGC)GtA(UGC)G BOI2P39969 1040 aa10.15□□□□□ -0.78
tA(UGC)GtA(UGC)G GAP1P19145 602 aaPredicted RBP10.14□□□□□ -0.79
tA(UGC)GtA(UGC)G UBP12P39538 1254 aa10.14□□□□□ -0.79
tA(UGC)GtA(UGC)G HXT10P43581 546 aa10.14□□□□□ -0.79
tA(UGC)GtA(UGC)G GAS5Q08193 484 aa10.14□□□□□ -0.79
tA(UGC)GtA(UGC)G PSH1Q12161 406 aa10.14□□□□□ -0.79
tA(UGC)GtA(UGC)G RVB2Q12464 471 aaKnown RBP10.14□□□□□ -0.79
tA(UGC)GtA(UGC)G FLO11P08640 1367 aa10.14□□□□□ -0.79
tA(UGC)GtA(UGC)G RPS19AP07280 144 aaKnown RBP10.13□□□□□ -0.79
tA(UGC)GtA(UGC)G RPS19BP07281 144 aaPredicted RBP10.13□□□□□ -0.79
tA(UGC)GtA(UGC)G NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
tA(UGC)GtA(UGC)G UBX2Q04228 584 aa10.13□□□□□ -0.79
tA(UGC)GtA(UGC)G CSI1Q04368 295 aa10.13□□□□□ -0.79
tA(UGC)GtA(UGC)G GLC3P32775 704 aa10.12□□□□□ -0.79
tA(UGC)GtA(UGC)G FET4P40988 552 aa10.12□□□□□ -0.79
tA(UGC)GtA(UGC)G YRB30P53107 440 aaPredicted RBP10.12□□□□□ -0.79
tA(UGC)GtA(UGC)G MAK21Q12176 1025 aaKnown RBP10.12□□□□□ -0.79
tA(UGC)GtA(UGC)G MGM1P32266 881 aa10.11□□□□□ -0.79
tA(UGC)GtA(UGC)G RRD1P40454 393 aaKnown RBP10.11□□□□□ -0.79
tA(UGC)GtA(UGC)G RPT4P53549 437 aaKnown RBP10.11□□□□□ -0.79
tA(UGC)GtA(UGC)G TIM50Q02776 476 aa10.11□□□□□ -0.79
tA(UGC)GtA(UGC)G THI3Q07471 609 aa10.11□□□□□ -0.79
tA(UGC)GtA(UGC)G ADR1P07248 1323 aa10.1□□□□□ -0.79
tA(UGC)GtA(UGC)G MSM1P22438 575 aa10.1□□□□□ -0.79
tA(UGC)GtA(UGC)G YIL092WP40497 633 aa10.1□□□□□ -0.79
tA(UGC)GtA(UGC)G NGR1P32831 672 aaKnown RBP10.09□□□□□ -0.79
tA(UGC)GtA(UGC)G STV1P37296 890 aa10.09□□□□□ -0.79
tA(UGC)GtA(UGC)G LCB1P25045 558 aaKnown RBP10.07□□□□□ -0.8
tA(UGC)GtA(UGC)G PRS1P32895 427 aaKnown RBP10.07□□□□□ -0.8
tA(UGC)GtA(UGC)G YGR117CP53270 476 aa10.07□□□□□ -0.8
tA(UGC)GtA(UGC)G POM152P39685 1337 aa10.07□□□□□ -0.8
tA(UGC)GtA(UGC)G AFG2P32794 780 aa10.06□□□□□ -0.8
tA(UGC)GtA(UGC)G ETP1P38748 585 aaKnown RBP10.06□□□□□ -0.8
tA(UGC)GtA(UGC)G EMP47P43555 445 aa10.06□□□□□ -0.8
tA(UGC)GtA(UGC)G VPS4P52917 437 aa10.06□□□□□ -0.8
tA(UGC)GtA(UGC)G IRC4Q03036 179 aa10.06□□□□□ -0.8
tA(UGC)GtA(UGC)G TOS4Q06266 489 aa10.06□□□□□ -0.8
tA(UGC)GtA(UGC)G NOP8Q08287 484 aaPredicted RBP10.06□□□□□ -0.8
tA(UGC)GtA(UGC)G RRG1Q12167 365 aaPredicted RBP10.06□□□□□ -0.8
tA(UGC)GtA(UGC)G TIF4632P39936 914 aaKnown RBP10.05□□□□□ -0.8
tA(UGC)GtA(UGC)G VHR2P40041 505 aa10.05□□□□□ -0.8
tA(UGC)GtA(UGC)G TRM44Q02648 567 aaKnown RBP10.05□□□□□ -0.8
tA(UGC)GtA(UGC)G YIL089WP40500 205 aa10.04□□□□□ -0.8
tA(UGC)GtA(UGC)G GSC2P40989 1895 aa10.04□□□□□ -0.8
tA(UGC)GtA(UGC)G GCD7P32502 381 aaPredicted RBP10.03□□□□□ -0.8
tA(UGC)GtA(UGC)G ILV3P39522 585 aaKnown RBP10.03□□□□□ -0.8
tA(UGC)GtA(UGC)G UTP7P40055 554 aaKnown RBP10.03□□□□□ -0.8
tA(UGC)GtA(UGC)G SRC1Q03707 834 aa10.03□□□□□ -0.8
tA(UGC)GtA(UGC)G PRP42Q03776 544 aaKnown RBP10.03□□□□□ -0.8
tA(UGC)GtA(UGC)G CRF1Q04930 467 aa10.03□□□□□ -0.8
tA(UGC)GtA(UGC)G SUP35P05453 685 aaKnown RBP10.02□□□□□ -0.81
tA(UGC)GtA(UGC)G ARG82P07250 355 aa10.02□□□□□ -0.81
tA(UGC)GtA(UGC)G DAL5P15365 543 aa10.02□□□□□ -0.81
tA(UGC)GtA(UGC)G NUG1P40010 520 aaKnown RBP10.02□□□□□ -0.81
tA(UGC)GtA(UGC)G PEA2P40091 420 aa10.02□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms